| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is thiL [H]
Identifier: 39998284
GI number: 39998284
Start: 3502085
End: 3503071
Strand: Direct
Name: thiL [H]
Synonym: GSU3194
Alternate gene names: 39998284
Gene position: 3502085-3503071 (Clockwise)
Preceding gene: 39998283
Following gene: 39998285
Centisome position: 91.82
GC content: 66.26
Gene sequence:
>987_bases GTGAGACTCGGCGAGATCGGTGAATTCGGCCTTATCGACAGGATTGCCGGCAAAGTAGCCGCCGGTGCCGGGGTTCGCCT CGGCATCGGCGACGACGCTGCCGTTACCGAAACGGAAGCGGGGCGCCTCCTGCTGTCCACCGCCGACATGCTCGTTGAAG GCATCCACTTTGACCTCTCCTTCACCGACCCCTTCAGGCTCGGCCGCAAATCCCTGGCGGTCAACGTCTCCGACATTGCC GCCATGGGGGGACACCCTCGCCATGCGCTGCTCTGTCTTGCCATTCCAACCGATCTGCCGGTTGAATTTCTCGACCGGTT CGCCGACGGCGTCATCTCCCTGGCAGAGGAATTCGGTGTCACCCTCATCGGCGGCGATACCTGCCGCTCCTCCTCCGGGC TTGTCATCTCCATCACCCTCCACGGCGAACAGGTCCCCACACGGATCATCCCGCGCAACGGGGCTCGGCCGGGCGACGAC GTGTTCGTCACCGGTACCGTCGGAGATTCAGCCCTGGGGCTCGAACTGCTGCGCAGAGGCGAACGCTCCGGACATGCCGT CGAACGCCACCTCAACCCCTCGCCCCGCGTCTCCGCCGGCCTGAGCCTGGCCGAATCGGGCATGGCCTCGGCCATGATCG ACGTGAGCGACGGTGTCCTTGCCGACCTGGGGCACATCCTGACCGGCTCGGGGGTCGGCGCCCGCATCGACGCATCCCTC ATCCCCCTTTCTCCCTACTTCAGCCAACGGGCGCCCGACGTGGCACCTGACCCCCTCTCTCTGGCACTGGCGGGAGGCGA GGACTACGAACTACTCTTTACTGCGGCGCCGGGACGGACGGCCGAGGTGGAAACGCTGCTGGCGGCGTGCGGCGTTACAG CGACCCGGATCGGTTCCATCGTTGCCGGGTCGGACGTCACGGTCACCGCAGCAGACGGGACCCTTATCCCTCCGAGACGC CGCGGCTTCAACCATTTCGCGCCGTAA
Upstream 100 bases:
>100_bases CGCCCGCCGCCGCCGAGGGGAAACCGGCCGCAAAGGCGCGTACCGCTCCGCGTCGCGGCATAGCGGCTCCCACTAAAGCC ACTGCCGCCGGGGCCAAGGG
Downstream 100 bases:
>100_bases ATCCTGCGCCGGCCCACTGCCTCGCGGCATCGCGCGTGCGCCGTCACGGAACACTTCTTGCTGTCTGTGGAAAGACGGAT CAATCACCACATGATAAACA
Product: thiamine monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MRLGEIGEFGLIDRIAGKVAAGAGVRLGIGDDAAVTETEAGRLLLSTADMLVEGIHFDLSFTDPFRLGRKSLAVNVSDIA AMGGHPRHALLCLAIPTDLPVEFLDRFADGVISLAEEFGVTLIGGDTCRSSSGLVISITLHGEQVPTRIIPRNGARPGDD VFVTGTVGDSALGLELLRRGERSGHAVERHLNPSPRVSAGLSLAESGMASAMIDVSDGVLADLGHILTGSGVGARIDASL IPLSPYFSQRAPDVAPDPLSLALAGGEDYELLFTAAPGRTAEVETLLAACGVTATRIGSIVAGSDVTVTAADGTLIPPRR RGFNHFAP
Sequences:
>Translated_328_residues MRLGEIGEFGLIDRIAGKVAAGAGVRLGIGDDAAVTETEAGRLLLSTADMLVEGIHFDLSFTDPFRLGRKSLAVNVSDIA AMGGHPRHALLCLAIPTDLPVEFLDRFADGVISLAEEFGVTLIGGDTCRSSSGLVISITLHGEQVPTRIIPRNGARPGDD VFVTGTVGDSALGLELLRRGERSGHAVERHLNPSPRVSAGLSLAESGMASAMIDVSDGVLADLGHILTGSGVGARIDASL IPLSPYFSQRAPDVAPDPLSLALAGGEDYELLFTAAPGRTAEVETLLAACGVTATRIGSIVAGSDVTVTAADGTLIPPRR RGFNHFAP >Mature_328_residues MRLGEIGEFGLIDRIAGKVAAGAGVRLGIGDDAAVTETEAGRLLLSTADMLVEGIHFDLSFTDPFRLGRKSLAVNVSDIA AMGGHPRHALLCLAIPTDLPVEFLDRFADGVISLAEEFGVTLIGGDTCRSSSGLVISITLHGEQVPTRIIPRNGARPGDD VFVTGTVGDSALGLELLRRGERSGHAVERHLNPSPRVSAGLSLAESGMASAMIDVSDGVLADLGHILTGSGVGARIDASL IPLSPYFSQRAPDVAPDPLSLALAGGEDYELLFTAAPGRTAEVETLLAACGVTATRIGSIVAGSDVTVTAADGTLIPPRR RGFNHFAP
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=329, Percent_Identity=39.8176291793313, Blast_Score=199, Evalue=2e-52, Organism=Escherichia coli, GI1788062, Length=223, Percent_Identity=28.6995515695067, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 33859; Mature: 33859
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLGEIGEFGLIDRIAGKVAAGAGVRLGIGDDAAVTETEAGRLLLSTADMLVEGIHFDLS CCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCEEECCCCEEEEEHHHHHHHCEEEEEE FTDPFRLGRKSLAVNVSDIAAMGGHPRHALLCLAIPTDLPVEFLDRFADGVISLAEEFGV ECCHHHHCCHHEEEEHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCE TLIGGDTCRSSSGLVISITLHGEQVPTRIIPRNGARPGDDVFVTGTVGDSALGLELLRRG EEEECCCCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCEEEEECCCCHHHHHHHHHCC ERSGHAVERHLNPSPRVSAGLSLAESGMASAMIDVSDGVLADLGHILTGSGVGARIDASL CCCCCHHHHCCCCCCCHHHCCHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCEECCEE IPLSPYFSQRAPDVAPDPLSLALAGGEDYELLFTAAPGRTAEVETLLAACGVTATRIGSI ECCCHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHCCE VAGSDVTVTAADGTLIPPRRRGFNHFAP EECCCEEEEECCCCCCCCHHCCCCCCCC >Mature Secondary Structure MRLGEIGEFGLIDRIAGKVAAGAGVRLGIGDDAAVTETEAGRLLLSTADMLVEGIHFDLS CCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCEEECCCCEEEEEHHHHHHHCEEEEEE FTDPFRLGRKSLAVNVSDIAAMGGHPRHALLCLAIPTDLPVEFLDRFADGVISLAEEFGV ECCHHHHCCHHEEEEHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCE TLIGGDTCRSSSGLVISITLHGEQVPTRIIPRNGARPGDDVFVTGTVGDSALGLELLRRG EEEECCCCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCEEEEECCCCHHHHHHHHHCC ERSGHAVERHLNPSPRVSAGLSLAESGMASAMIDVSDGVLADLGHILTGSGVGARIDASL CCCCCHHHHCCCCCCCHHHCCHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCEECCEE IPLSPYFSQRAPDVAPDPLSLALAGGEDYELLFTAAPGRTAEVETLLAACGVTATRIGSI ECCCHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHCCE VAGSDVTVTAADGTLIPPRRRGFNHFAP EECCCEEEEECCCCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]