Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is yqeZ [H]

Identifier: 39997526

GI number: 39997526

Start: 2665867

End: 2667168

Strand: Reverse

Name: yqeZ [H]

Synonym: GSU2431

Alternate gene names: 39997526

Gene position: 2667168-2665867 (Counterclockwise)

Preceding gene: 39997527

Following gene: 39997525

Centisome position: 69.93

GC content: 67.36

Gene sequence:

>1302_bases
ATGGGGGGATCCCGGCGGGGGATCCGGATCGGCGCGCTGATCGCCTGGTGCCTCATGATCTGCACCGGCGCGGCGCTCCT
GGCGTCCACCGGGGGCGATGTGCGGGTGGTCGGCCTCAGGGGGGCCGTGAACCCGGTTACCGCCTCATTCCTCAAGCGGA
ACCTGGACGATGCGGCCCGGAAGGGGGATCGGCTCGTGCTGGTGGAGATGGATACCCCCGGCGGCCTCGACACGGCCATG
CGGGAGATCGTCAAGGATATCCTGGCCAGCCCCGTGCCCGTGGCGGTTTACGTGGCGCCGGCCGGGGCCCGGGCCGCCTC
GGCGGGGGCAATCATCACGCTGGCGGCCGATATCGCCGCCATGGCGCCGGGGACGAACATCGGCGCGGCCCATCCCGTGG
CCATCGGCGAGAAGCAGGACAAGGTCATGGAGCAGAAGGTACTCAACGATGCCGAGGCTTACGTGGACGGCATCGCTTCC
CGCCGGGGGCGCAATGCCGAGGTGGCGCGGCGGATGGTGCGCGAAAGCCTGTCGCTCCCCGCTGAAAAGGCCCTGGAAGA
GAAGATGATTGACCTGATCGCCGCCGACCGGTCCGCTCTCTTTGCCCAACTGGAGGGGCGGCCGGTGTCCCGTCCGGGGG
GCGACACGGTCCTGCGGCTGGCCGGGGCTCCGGTCCGGGAGGCGGAGATGACGACCCGGGAGCGGATCCTCGACGCCATC
GGCAATCCCAACGTGGCCTACGTCCTCATGATGCTCGGGTTCCTGGGGCTGTTCTTCGAGTTGTCGAACCCCGGCGTGAT
CCTGCCCGGCGTCATCGGCGGCATTGCCCTGATCCTGGCCTTCTTCGCCTTCCAGACCCTGCCGGTCAACTATGCCGGCG
TGCTTCTCATCCTGCTTGCGCTCATCCTTTTCATTGCCGAGATCAAGGTGGTCTCGGGCGGCATGCTGACGGTGGGAGGC
GTCATTGCCATGGTTCTCGGATCGATCCTTCTCTTCGAGTCGCCGGAGCCCTATCTCCGGGTTTCCTGGCAGGTGATCGC
CGTGACGGTGGCTGCCGTGTCGGCTTTTTCGATCTTCGCCGTCACCATGGCGGTCCGGGCGCATCGCCGCAAGCCCACCA
CCGGCGGCGAAGGCCTGGTGGGGGAGACCGGCAAGGCTCTATCCCCCATCGCTCCCGAGGGGCGGGTCTTCATCCACGGC
GAATACTGGGACGCCTGGAGCGATGAACCCCTGGCCGAGGGGGACCGGGTAATGGTGGTTGCGGTGGACGGGATGAGGGT
CAAGGTGAAAAAGTTATCGTAG

Upstream 100 bases:

>100_bases
GCATGCCGGCCTTCGGCGAAGCGATGATCCCGCCGGCCGATGCCCTGAAGATCGGGGAGTACGTCGTGGCGAGCTTCCCA
TGAGAGCCCTCGTTCCGGCC

Downstream 100 bases:

>100_bases
GGGCGATCCTTGCGATCGCCCATTTCCAGACGGATGCAATCATGGGCGAAGAGACGAATTCGCCCCCACGTAAGGGAGGT
TTCCCCATGTTCGATATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MGGSRRGIRIGALIAWCLMICTGAALLASTGGDVRVVGLRGAVNPVTASFLKRNLDDAARKGDRLVLVEMDTPGGLDTAM
REIVKDILASPVPVAVYVAPAGARAASAGAIITLAADIAAMAPGTNIGAAHPVAIGEKQDKVMEQKVLNDAEAYVDGIAS
RRGRNAEVARRMVRESLSLPAEKALEEKMIDLIAADRSALFAQLEGRPVSRPGGDTVLRLAGAPVREAEMTTRERILDAI
GNPNVAYVLMMLGFLGLFFELSNPGVILPGVIGGIALILAFFAFQTLPVNYAGVLLILLALILFIAEIKVVSGGMLTVGG
VIAMVLGSILLFESPEPYLRVSWQVIAVTVAAVSAFSIFAVTMAVRAHRRKPTTGGEGLVGETGKALSPIAPEGRVFIHG
EYWDAWSDEPLAEGDRVMVVAVDGMRVKVKKLS

Sequences:

>Translated_433_residues
MGGSRRGIRIGALIAWCLMICTGAALLASTGGDVRVVGLRGAVNPVTASFLKRNLDDAARKGDRLVLVEMDTPGGLDTAM
REIVKDILASPVPVAVYVAPAGARAASAGAIITLAADIAAMAPGTNIGAAHPVAIGEKQDKVMEQKVLNDAEAYVDGIAS
RRGRNAEVARRMVRESLSLPAEKALEEKMIDLIAADRSALFAQLEGRPVSRPGGDTVLRLAGAPVREAEMTTRERILDAI
GNPNVAYVLMMLGFLGLFFELSNPGVILPGVIGGIALILAFFAFQTLPVNYAGVLLILLALILFIAEIKVVSGGMLTVGG
VIAMVLGSILLFESPEPYLRVSWQVIAVTVAAVSAFSIFAVTMAVRAHRRKPTTGGEGLVGETGKALSPIAPEGRVFIHG
EYWDAWSDEPLAEGDRVMVVAVDGMRVKVKKLS
>Mature_432_residues
GGSRRGIRIGALIAWCLMICTGAALLASTGGDVRVVGLRGAVNPVTASFLKRNLDDAARKGDRLVLVEMDTPGGLDTAMR
EIVKDILASPVPVAVYVAPAGARAASAGAIITLAADIAAMAPGTNIGAAHPVAIGEKQDKVMEQKVLNDAEAYVDGIASR
RGRNAEVARRMVRESLSLPAEKALEEKMIDLIAADRSALFAQLEGRPVSRPGGDTVLRLAGAPVREAEMTTRERILDAIG
NPNVAYVLMMLGFLGLFFELSNPGVILPGVIGGIALILAFFAFQTLPVNYAGVLLILLALILFIAEIKVVSGGMLTVGGV
IAMVLGSILLFESPEPYLRVSWQVIAVTVAAVSAFSIFAVTMAVRAHRRKPTTGGEGLVGETGKALSPIAPEGRVFIHGE
YWDAWSDEPLAEGDRVMVVAVDGMRVKVKKLS

Specific function: Unknown

COG id: COG1030

COG function: function code O; Membrane-bound serine protease (ClpP class)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002810
- InterPro:   IPR002825 [H]

Pfam domain/function: PF01972 DUF114; PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 45539; Mature: 45408

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGSRRGIRIGALIAWCLMICTGAALLASTGGDVRVVGLRGAVNPVTASFLKRNLDDAAR
CCCCCCCCHHHHHHHHHHHHHHCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCHHHHHC
KGDRLVLVEMDTPGGLDTAMREIVKDILASPVPVAVYVAPAGARAASAGAIITLAADIAA
CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEHHHHHH
MAPGTNIGAAHPVAIGEKQDKVMEQKVLNDAEAYVDGIASRRGRNAEVARRMVRESLSLP
HCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
AEKALEEKMIDLIAADRSALFAQLEGRPVSRPGGDTVLRLAGAPVREAEMTTRERILDAI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
GNPNVAYVLMMLGFLGLFFELSNPGVILPGVIGGIALILAFFAFQTLPVNYAGVLLILLA
CCCCHHHHHHHHHHHHHHEECCCCCEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LILFIAEIKVVSGGMLTVGGVIAMVLGSILLFESPEPYLRVSWQVIAVTVAAVSAFSIFA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
VTMAVRAHRRKPTTGGEGLVGETGKALSPIAPEGRVFIHGEYWDAWSDEPLAEGDRVMVV
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEE
AVDGMRVKVKKLS
EECCCEEEEEECC
>Mature Secondary Structure 
GGSRRGIRIGALIAWCLMICTGAALLASTGGDVRVVGLRGAVNPVTASFLKRNLDDAAR
CCCCCCCHHHHHHHHHHHHHHCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCHHHHHC
KGDRLVLVEMDTPGGLDTAMREIVKDILASPVPVAVYVAPAGARAASAGAIITLAADIAA
CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEHHHHHH
MAPGTNIGAAHPVAIGEKQDKVMEQKVLNDAEAYVDGIASRRGRNAEVARRMVRESLSLP
HCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
AEKALEEKMIDLIAADRSALFAQLEGRPVSRPGGDTVLRLAGAPVREAEMTTRERILDAI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
GNPNVAYVLMMLGFLGLFFELSNPGVILPGVIGGIALILAFFAFQTLPVNYAGVLLILLA
CCCCHHHHHHHHHHHHHHEECCCCCEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LILFIAEIKVVSGGMLTVGGVIAMVLGSILLFESPEPYLRVSWQVIAVTVAAVSAFSIFA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
VTMAVRAHRRKPTTGGEGLVGETGKALSPIAPEGRVFIHGEYWDAWSDEPLAEGDRVMVV
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEE
AVDGMRVKVKKLS
EECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]