Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is 37679199

Identifier: 37679199

GI number: 37679199

Start: 1014703

End: 1015200

Strand: Direct

Name: 37679199

Synonym: VV1015

Alternate gene names: NA

Gene position: 1014703-1015200 (Clockwise)

Preceding gene: 37679197

Following gene: 37679203

Centisome position: 30.25

GC content: 43.37

Gene sequence:

>498_bases
ATGAACAAGCAACTCGCGAAGATCTACAAACCGGGAATGGTTAAGTTTGCTTTAAACATTTGGCCGCCATTTTGGGGGGC
AGGAATTCGCATTTTACGCATAAGTGATGATTTCCGTACGGTTGAAATGAGACTGAAATTGCGCTGGTGGAACAAAAACG
CCAATCGTACTCAGTATGGCGGCAGTATTTTCTCTTTAACGGATCCAGTTTACTCATTAATGCTGATGGGGATTTTGGGG
GAGGAGTACTATGTCTGGGACAAGGAAGCGAGCATTAACTTTATTCAACCTGGGAAAAGTGATCTCTTTGCTAAGTTTGA
GATTTGCCAATCGGTGTTAGATGAGATTTACTCCGTGACCAAGAGAGGGGAGAAGTGCTTTCCTGAATTTGTCATCCATG
TCAAAGATGCACAAGGGAATGTGGTTTCGGAAGTTCAGCGTAAGCTGTATGTACGCAAAAAGCCGCAATATCGAGAAGAA
GTCATCGTGACAAACTAA

Upstream 100 bases:

>100_bases
GGGTTACTATATTCTTTTTGTAAATTCGCGTTAGGTCGCTTATATTGCTCATCTGACCAGTTACAATTTAATAACAATTT
GCAAAGAGAGCAAGGAAGGC

Downstream 100 bases:

>100_bases
AAAAACCTCCCGAAGGAGGTTTTTCATCATTAGTCTTCAAGCTCTGCGAGGCACATTTCTTCGTAGATCTGTTCAACCCA
GTTTTTCACACGTTCTTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MNKQLAKIYKPGMVKFALNIWPPFWGAGIRILRISDDFRTVEMRLKLRWWNKNANRTQYGGSIFSLTDPVYSLMLMGILG
EEYYVWDKEASINFIQPGKSDLFAKFEICQSVLDEIYSVTKRGEKCFPEFVIHVKDAQGNVVSEVQRKLYVRKKPQYREE
VIVTN

Sequences:

>Translated_165_residues
MNKQLAKIYKPGMVKFALNIWPPFWGAGIRILRISDDFRTVEMRLKLRWWNKNANRTQYGGSIFSLTDPVYSLMLMGILG
EEYYVWDKEASINFIQPGKSDLFAKFEICQSVLDEIYSVTKRGEKCFPEFVIHVKDAQGNVVSEVQRKLYVRKKPQYREE
VIVTN
>Mature_165_residues
MNKQLAKIYKPGMVKFALNIWPPFWGAGIRILRISDDFRTVEMRLKLRWWNKNANRTQYGGSIFSLTDPVYSLMLMGILG
EEYYVWDKEASINFIQPGKSDLFAKFEICQSVLDEIYSVTKRGEKCFPEFVIHVKDAQGNVVSEVQRKLYVRKKPQYREE
VIVTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19353; Mature: 19353

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKQLAKIYKPGMVKFALNIWPPFWGAGIRILRISDDFRTVEMRLKLRWWNKNANRTQYG
CCCHHHHHHCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCCCEECC
GSIFSLTDPVYSLMLMGILGEEYYVWDKEASINFIQPGKSDLFAKFEICQSVLDEIYSVT
CEEEEHHHHHHHHHHHHHHCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH
KRGEKCFPEFVIHVKDAQGNVVSEVQRKLYVRKKPQYREEVIVTN
HCCHHCCHHHEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEECC
>Mature Secondary Structure
MNKQLAKIYKPGMVKFALNIWPPFWGAGIRILRISDDFRTVEMRLKLRWWNKNANRTQYG
CCCHHHHHHCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCCCEECC
GSIFSLTDPVYSLMLMGILGEEYYVWDKEASINFIQPGKSDLFAKFEICQSVLDEIYSVT
CEEEEHHHHHHHHHHHHHHCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH
KRGEKCFPEFVIHVKDAQGNVVSEVQRKLYVRKKPQYREEVIVTN
HCCHHCCHHHEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA