| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is ycdQ [C]
Identifier: 37523287
GI number: 37523287
Start: 3930005
End: 3931063
Strand: Reverse
Name: ycdQ [C]
Synonym: gll3718
Alternate gene names: 37523287
Gene position: 3931063-3930005 (Counterclockwise)
Preceding gene: 37523288
Following gene: 37523286
Centisome position: 84.38
GC content: 64.49
Gene sequence:
>1059_bases ATGACGATATTTAGGCAAGCGCGCTTTCCGGTAGTCCATCGGCCACCTTCCAGTGGCGGCGAACCGCTGGTCAGCGTGCT CATCTGCAATTACAACTACGGCCGCTTCGTCGGTGAAGCGATCGACAGCGTCCTGGAGCAGACCTATCGCAACATCGAAC TCATCGTGGTAGACGATGGTTCCACCGACGACTCCCGCCAAGTCATCGGTGCGTACAGCGGCAGGCTGAGGGCCGTCTTT CAGCAAAACGGCGGCCAAGGCGCAGCCTTCAACAGCGGACTGGCCGAGGCCCGCGGCGAGATTGTCTGCTTTTTGGACGC GGACGATTACTTTCACCGCGAAAAAGTTGCCCGGGTCGTGCGGGCTTTTGCCGAGCACCCCGAATGGGTGCAGCTTGCCC ACAACTGGATTTCCGTCGACATCGACGGCCGGCCGATGGGCCGCAACCCGGTGCGGCGCTTCACCCGCGGCGATATCCGC ACGCTGCTGTTGCGCTGGGGCCGCTACGGTTGGGGGATCACCTCCGGACTGAGCTATCGGCGGGTGGTGCTCGAACAGGT GCTGCCCATCCCCAAGCGTCCGCGCGCCGCGGATACCTATCTGACGGCGACGGTGCCTTTTTATGGCCAGGTGGGCGGGA TCGCCGACCAGCTGATGTACTACCGGGTGCACGGCAAGAACCGGCGCGCCCGCAGCGACAACCTGCCCTACCTGCTCCAG CAGCGCGAGGACACCTGCGTCTGCATCAACACCGCTGCCCGCGACTCGGGATTGGCGGAGCGCTTCGACATCCGCTGCGA CGGAGATTATCGGGGCTTCAAGGCCCTCGAAAGCGGCGGCGGCTCCTGGAGCGATGCCTTCGGAATTTGCTGGTTGTCGC TGCAGGAATTTGCCGCACTGCGGCGCAAGCCGGCCGAAGCACTCGCCAGACTCGCCCAGCGCCTCGGTTGTGTGCTGTTG CCGCCCGAGCAGTCCCGGGGGCTGTTGCGCCTCGGGTTGCAGGGCTATGTGCGCTCGCGGCTGTTCGGTGCGCAGGCGTC TTCGGGAAAAAGCTCCTGA
Upstream 100 bases:
>100_bases TCGACGCGCGCAACTGCCTCGACCCGCAGCAGGTGGTACAGGCGGGTATGCGTTACTCGGGCGTCGGTCGCTAGCCACAG GCATCAAGGGAGCGAAATCC
Downstream 100 bases:
>100_bases ACTTTCCGCCAGGACGAACCACCCAACCGCTTCATTTATTCATGAGGAACAGTCATGGTCAAACGCTTTGCTGCCGCTCT GCTCGCCGGTGTGCTGGGCG
Product: glucosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MTIFRQARFPVVHRPPSSGGEPLVSVLICNYNYGRFVGEAIDSVLEQTYRNIELIVVDDGSTDDSRQVIGAYSGRLRAVF QQNGGQGAAFNSGLAEARGEIVCFLDADDYFHREKVARVVRAFAEHPEWVQLAHNWISVDIDGRPMGRNPVRRFTRGDIR TLLLRWGRYGWGITSGLSYRRVVLEQVLPIPKRPRAADTYLTATVPFYGQVGGIADQLMYYRVHGKNRRARSDNLPYLLQ QREDTCVCINTAARDSGLAERFDIRCDGDYRGFKALESGGGSWSDAFGICWLSLQEFAALRRKPAEALARLAQRLGCVLL PPEQSRGLLRLGLQGYVRSRLFGAQASSGKSS
Sequences:
>Translated_352_residues MTIFRQARFPVVHRPPSSGGEPLVSVLICNYNYGRFVGEAIDSVLEQTYRNIELIVVDDGSTDDSRQVIGAYSGRLRAVF QQNGGQGAAFNSGLAEARGEIVCFLDADDYFHREKVARVVRAFAEHPEWVQLAHNWISVDIDGRPMGRNPVRRFTRGDIR TLLLRWGRYGWGITSGLSYRRVVLEQVLPIPKRPRAADTYLTATVPFYGQVGGIADQLMYYRVHGKNRRARSDNLPYLLQ QREDTCVCINTAARDSGLAERFDIRCDGDYRGFKALESGGGSWSDAFGICWLSLQEFAALRRKPAEALARLAQRLGCVLL PPEQSRGLLRLGLQGYVRSRLFGAQASSGKSS >Mature_351_residues TIFRQARFPVVHRPPSSGGEPLVSVLICNYNYGRFVGEAIDSVLEQTYRNIELIVVDDGSTDDSRQVIGAYSGRLRAVFQ QNGGQGAAFNSGLAEARGEIVCFLDADDYFHREKVARVVRAFAEHPEWVQLAHNWISVDIDGRPMGRNPVRRFTRGDIRT LLLRWGRYGWGITSGLSYRRVVLEQVLPIPKRPRAADTYLTATVPFYGQVGGIADQLMYYRVHGKNRRARSDNLPYLLQQ REDTCVCINTAARDSGLAERFDIRCDGDYRGFKALESGGGSWSDAFGICWLSLQEFAALRRKPAEALARLAQRLGCVLLP PEQSRGLLRLGLQGYVRSRLFGAQASSGKSS
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787259, Length=131, Percent_Identity=31.2977099236641, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1790044, Length=89, Percent_Identity=37.0786516853933, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 39353; Mature: 39222
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIFRQARFPVVHRPPSSGGEPLVSVLICNYNYGRFVGEAIDSVLEQTYRNIELIVVDDG CCCCCCCCCCEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEECC STDDSRQVIGAYSGRLRAVFQQNGGQGAAFNSGLAEARGEIVCFLDADDYFHREKVARVV CCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHCCCCEEEEECCCHHHHHHHHHHHH RAFAEHPEWVQLAHNWISVDIDGRPMGRNPVRRFTRGDIRTLLLRWGRYGWGITSGLSYR HHHHCCCHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHH RVVLEQVLPIPKRPRAADTYLTATVPFYGQVGGIADQLMYYRVHGKNRRARSDNLPYLLQ HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHEEEEECCCCCCCCCCCCHHEE QREDTCVCINTAARDSGLAERFDIRCDGDYRGFKALESGGGSWSDAFGICWLSLQEFAAL CCCCCEEEEECCCCCCCCHHHEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHH RRKPAEALARLAQRLGCVLLPPEQSRGLLRLGLQGYVRSRLFGAQASSGKSS HCCHHHHHHHHHHHCCEEEECCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TIFRQARFPVVHRPPSSGGEPLVSVLICNYNYGRFVGEAIDSVLEQTYRNIELIVVDDG CCCCCCCCCEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEECC STDDSRQVIGAYSGRLRAVFQQNGGQGAAFNSGLAEARGEIVCFLDADDYFHREKVARVV CCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHCCCCEEEEECCCHHHHHHHHHHHH RAFAEHPEWVQLAHNWISVDIDGRPMGRNPVRRFTRGDIRTLLLRWGRYGWGITSGLSYR HHHHCCCHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHH RVVLEQVLPIPKRPRAADTYLTATVPFYGQVGGIADQLMYYRVHGKNRRARSDNLPYLLQ HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHEEEEECCCCCCCCCCCCHHEE QREDTCVCINTAARDSGLAERFDIRCDGDYRGFKALESGGGSWSDAFGICWLSLQEFAAL CCCCCEEEEECCCCCCCCHHHEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHH RRKPAEALARLAQRLGCVLLPPEQSRGLLRLGLQGYVRSRLFGAQASSGKSS HCCHHHHHHHHHHHCCEEEECCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11759840; 2111805 [H]