| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is gspK [H]
Identifier: 34499262
GI number: 34499262
Start: 4106115
End: 4107104
Strand: Reverse
Name: gspK [H]
Synonym: CV_3807
Alternate gene names: 34499262
Gene position: 4107104-4106115 (Counterclockwise)
Preceding gene: 34499263
Following gene: 34499261
Centisome position: 86.45
GC content: 65.86
Gene sequence:
>990_bases ATGAGGCGGCGCCAATCCGGCATGGCGGTGATCATGGCGCTGCTGATCGTCGCGCTGGCCACCACCGCCGCCAGCCTGGT GTTGTGGCAGCAGGGGCTTTGGTGGCACCAGTTGGAGAACGACAAGAGCCGCGCCCAACTGCGCCTGGTGGCCGACGCCG GCCTGGGCTGGGCGATGGAGATACTGCGCTTCAACAACGGCCCGGCCGGCAACGGCGTGGTGGCGCTGTCCCAGCTGTGG GCGCAACCGTTGCCGCAGACCGAGGCGCAGGGCGTGAAGGTGAGCGGGGCGCTGACCGATTTGCAGGGCCGCTTCAACGT CAATTCGCTGGTGCTCAACGGCCAGACCAACGTCAAGCAGCTGAAATTCTACAAGCGGCTGCTCAGTTCGCTGGGTCTGC CGAGCAAGCTGTCCGAGCCCTTGCTCAAGGAGCTGCGCGGCGGCAAGGACGAGGACGACAAGCCGTCGGCGGATGGCGCG GTCGCCGCGCCGCAGCCCAACCGCCCGCTGGCGCGGGTGGAGATGCTGCGCTGGCTGCCAGGCTACACGCCGGAGGTGAT GGAGAAGCTGCTGCCGCACATCGCGGCCTTGCCGCCGTCGGTGACGCAGATCAACGTCAACACCGCGACCGGCGAGGTGC TGAAGGCGATGGTTCTCGGCCTGGGCGACGGCAACATGATGGTGTTGATGAAGCAGCGGCAGACCAATTATTTCAAGGAC GCCAACGATTTCAAGGCCCGGCTGCCGGGCGGCGGCGTGTCCTTGCAGGATGTGGACATCGGCGCCGCGTCCAGCTATTT CCAGCTCGACAGCCGCGCCAGCTACGACAAGGCCAGGCTGTCGATGCGGGCGATGATCTACAGCAATCAGAACGTCGTCA AACTGGTTTGGCGACAGGAAGGCAATGACGGCCGCAGCCCGCAGGCGCGGTCCGGTGGAGACAAACATGACGACGCTGCG ACTTTATCTGCGTCCGGGCTGGCCCGATAG
Upstream 100 bases:
>100_bases GGCCGATGGGCGACGCGGCCCAGGGACGGGTGCCGAGAGCGCTGGAGATGCGGGTGCAAATGCCGGGCAAGCGGCAGGCG CGGCGGATATGGGTGTTGCC
Downstream 100 bases:
>100_bases CGAGCCCGGCCTGCCCTGGGCCTTGCTGGGCGCCCGCGGCGAGCTCTCCGCCCAGGGCGACAGCGCGCCGGGCGGCTGGC CCAAGGCCGAGCAGTGCGAG
Product: general secretory pathway protein K
Products: NA
Alternate protein names: Pectic enzymes secretion protein OUTK [H]
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MRRRQSGMAVIMALLIVALATTAASLVLWQQGLWWHQLENDKSRAQLRLVADAGLGWAMEILRFNNGPAGNGVVALSQLW AQPLPQTEAQGVKVSGALTDLQGRFNVNSLVLNGQTNVKQLKFYKRLLSSLGLPSKLSEPLLKELRGGKDEDDKPSADGA VAAPQPNRPLARVEMLRWLPGYTPEVMEKLLPHIAALPPSVTQINVNTATGEVLKAMVLGLGDGNMMVLMKQRQTNYFKD ANDFKARLPGGGVSLQDVDIGAASSYFQLDSRASYDKARLSMRAMIYSNQNVVKLVWRQEGNDGRSPQARSGGDKHDDAA TLSASGLAR
Sequences:
>Translated_329_residues MRRRQSGMAVIMALLIVALATTAASLVLWQQGLWWHQLENDKSRAQLRLVADAGLGWAMEILRFNNGPAGNGVVALSQLW AQPLPQTEAQGVKVSGALTDLQGRFNVNSLVLNGQTNVKQLKFYKRLLSSLGLPSKLSEPLLKELRGGKDEDDKPSADGA VAAPQPNRPLARVEMLRWLPGYTPEVMEKLLPHIAALPPSVTQINVNTATGEVLKAMVLGLGDGNMMVLMKQRQTNYFKD ANDFKARLPGGGVSLQDVDIGAASSYFQLDSRASYDKARLSMRAMIYSNQNVVKLVWRQEGNDGRSPQARSGGDKHDDAA TLSASGLAR >Mature_329_residues MRRRQSGMAVIMALLIVALATTAASLVLWQQGLWWHQLENDKSRAQLRLVADAGLGWAMEILRFNNGPAGNGVVALSQLW AQPLPQTEAQGVKVSGALTDLQGRFNVNSLVLNGQTNVKQLKFYKRLLSSLGLPSKLSEPLLKELRGGKDEDDKPSADGA VAAPQPNRPLARVEMLRWLPGYTPEVMEKLLPHIAALPPSVTQINVNTATGEVLKAMVLGLGDGNMMVLMKQRQTNYFKD ANDFKARLPGGGVSLQDVDIGAASSYFQLDSRASYDKARLSMRAMIYSNQNVVKLVWRQEGNDGRSPQARSGGDKHDDAA TLSASGLAR
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of the multiple pectic enzymes [H]
COG id: COG3156
COG function: function code U; Type II secretory pathway, component PulK
Gene ontology:
Cell location: Cell inner membrane (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP K family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005628 [H]
Pfam domain/function: PF03934 GspK [H]
EC number: NA
Molecular weight: Translated: 35784; Mature: 35784
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRQSGMAVIMALLIVALATTAASLVLWQQGLWWHQLENDKSRAQLRLVADAGLGWAME CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEEECCCCHHHHH ILRFNNGPAGNGVVALSQLWAQPLPQTEAQGVKVSGALTDLQGRFNVNSLVLNGQTNVKQ HHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCHHHCCCCCCCEEEEECCCCCHHH LKFYKRLLSSLGLPSKLSEPLLKELRGGKDEDDKPSADGAVAAPQPNRPLARVEMLRWLP HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHCC GYTPEVMEKLLPHIAALPPSVTQINVNTATGEVLKAMVLGLGDGNMMVLMKQRQTNYFKD CCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC ANDFKARLPGGGVSLQDVDIGAASSYFQLDSRASYDKARLSMRAMIYSNQNVVKLVWRQE CCHHHEECCCCCCEEEEECCCCCCCCEEECCCCCHHHHHHHHHHEEECCCCEEEEEEEEC GNDGRSPQARSGGDKHDDAATLSASGLAR CCCCCCCCCCCCCCCCCCHHHCCCCCCCC >Mature Secondary Structure MRRRQSGMAVIMALLIVALATTAASLVLWQQGLWWHQLENDKSRAQLRLVADAGLGWAME CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEEECCCCHHHHH ILRFNNGPAGNGVVALSQLWAQPLPQTEAQGVKVSGALTDLQGRFNVNSLVLNGQTNVKQ HHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCHHHCCCCCCCEEEEECCCCCHHH LKFYKRLLSSLGLPSKLSEPLLKELRGGKDEDDKPSADGAVAAPQPNRPLARVEMLRWLP HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHCC GYTPEVMEKLLPHIAALPPSVTQINVNTATGEVLKAMVLGLGDGNMMVLMKQRQTNYFKD CCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC ANDFKARLPGGGVSLQDVDIGAASSYFQLDSRASYDKARLSMRAMIYSNQNVVKLVWRQE CCHHHEECCCCCCEEEEECCCCCCCCEEECCCCCHHHHHHHHHHEEECCCCEEEEEEEEC GNDGRSPQARSGGDKHDDAATLSASGLAR CCCCCCCCCCCCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8326859 [H]