Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is rseA [C]

Identifier: 34497514

GI number: 34497514

Start: 2247096

End: 2247578

Strand: Direct

Name: rseA [C]

Synonym: CV_2059

Alternate gene names: 34497514

Gene position: 2247096-2247578 (Clockwise)

Preceding gene: 34497513

Following gene: 34497515

Centisome position: 47.3

GC content: 67.7

Gene sequence:

>483_bases
ATGAAAGAAACGATATCCGCACTGATGGACGGCGAACTGGACGGGCCCGATGCCGACAAGGCAATCGCCGCCATCGCCGG
AGACAAGGACCTGGATGATGCCTGGGAACAGTATCATCTGATCGGCGACGCCATGCGCGCCAACCGCCTGTCCTCGCTCA
ATGTGAGGGCCAAGGTGGCGGCGCGGCTGGCGGAGGAGCCGACGGTCCTGGCGCCGCGTCGCTGGACGCGTCCGCGCAAG
GCGCGCGCCGCGAGCGCGGTGGCGCTGGCCGCGAGCGTCAGCTTCGCAGCCGTAGTGGGTTGGCAGCAGCTGTCCCACCG
CAACGCTCCGCCGTCGGCGATCGCCGATCGCGGCGTGCCGGTGCAGATCGCGAACCCCGCGGCGGTGATGGACCAGGATG
ATCCCTATGTGCTGGCGCACCAGGAGGTGACCGCAGACCAGAGCGTGATGCGAGTGTCCTATGGAAACGGAGCTCGCCAC
TGA

Upstream 100 bases:

>100_bases
CGATAGGTACCGTGCGTTCGCGGATTTTCCGCGCACGCGAGGCGATTGCTGCTGAGCTCAGGCCTTTGCTGGATACGGCC
AAGAACAGAAGGTGGTAAGT

Downstream 100 bases:

>100_bases
TGCGTGTCGTTCCTCTGATTGGTGTTTTGATGTTCGGGGCCGCGTGCGCGGCCCATGCGGAGGATGACATGCAGCTGCTG
CGCAATGTCGGCAACGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MKETISALMDGELDGPDADKAIAAIAGDKDLDDAWEQYHLIGDAMRANRLSSLNVRAKVAARLAEEPTVLAPRRWTRPRK
ARAASAVALAASVSFAAVVGWQQLSHRNAPPSAIADRGVPVQIANPAAVMDQDDPYVLAHQEVTADQSVMRVSYGNGARH

Sequences:

>Translated_160_residues
MKETISALMDGELDGPDADKAIAAIAGDKDLDDAWEQYHLIGDAMRANRLSSLNVRAKVAARLAEEPTVLAPRRWTRPRK
ARAASAVALAASVSFAAVVGWQQLSHRNAPPSAIADRGVPVQIANPAAVMDQDDPYVLAHQEVTADQSVMRVSYGNGARH
>Mature_160_residues
MKETISALMDGELDGPDADKAIAAIAGDKDLDDAWEQYHLIGDAMRANRLSSLNVRAKVAARLAEEPTVLAPRRWTRPRK
ARAASAVALAASVSFAAVVGWQQLSHRNAPPSAIADRGVPVQIANPAAVMDQDDPYVLAHQEVTADQSVMRVSYGNGARH

Specific function: Negative Regulator Of Rpoe. [C]

COG id: COG3073

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17134; Mature: 17134

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKETISALMDGELDGPDADKAIAAIAGDKDLDDAWEQYHLIGDAMRANRLSSLNVRAKVA
CHHHHHHHHCCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ARLAEEPTVLAPRRWTRPRKARAASAVALAASVSFAAVVGWQQLSHRNAPPSAIADRGVP
HHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC
VQIANPAAVMDQDDPYVLAHQEVTADQSVMRVSYGNGARH
EEECCCCEECCCCCCEEEECCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MKETISALMDGELDGPDADKAIAAIAGDKDLDDAWEQYHLIGDAMRANRLSSLNVRAKVA
CHHHHHHHHCCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ARLAEEPTVLAPRRWTRPRKARAASAVALAASVSFAAVVGWQQLSHRNAPPSAIADRGVP
HHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC
VQIANPAAVMDQDDPYVLAHQEVTADQSVMRVSYGNGARH
EEECCCCEECCCCCCEEEECCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA