Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33863129

Identifier: 33863129

GI number: 33863129

Start: 938489

End: 939121

Strand: Direct

Name: 33863129

Synonym: PMT0857

Alternate gene names: NA

Gene position: 938489-939121 (Clockwise)

Preceding gene: 33863125

Following gene: 33863130

Centisome position: 38.93

GC content: 39.02

Gene sequence:

>633_bases
GTGACACGAAAGAGAAGATATGCGGCCAAAATAATACCCTTATCCGATACATTTCATGTTAATACGTTGTTTTTTTACTT
CTCCGGTGCTAGCATTAAGGAATATCAGCCTTCCAGTCATCAACATCAAAACGTGCTTAGAGAGCTGATTATTAGACCTA
ATCAAAATTGCCTTGCATCCTTTTTGAAGAGGTGTACAAACCTGAATTCCACGAGTTGGATTGAAACGTCCATTTTAGTG
ATTGGCACCTTTGGTTTCGCTGTCCTGATGCATATAGCGCCTGTAAGGGCAACTCCACTCAAGCTCATGTGCTCTTACAT
CTATGAAGGCAAAGCATATAAGGAAATATACATTGTCGACCCCGAGAAATTATTAGTAGAGATAAGTTATCCATTTGCAC
CATCTGAAGAAGATAGAAATATCATCGAGAGACTTATCGTTGAATCAATCTCACCAGTTATTGTTGTTGCTAGACTTCAA
ACAAGCAACAGTCATTACTTCAAATATGAGATCAACAAAGTAAACCTTGAGATCAAAACATTTTCAGTAAGCCTTGTCGC
CGGAGTTCAGGCGATGACAACCCGTACTTGCAAGAGAATTAAAGATGCTCCTAGCCATCAGATCAAGATTTAA

Upstream 100 bases:

>100_bases
ATGAGATTTCTATACGATATGTTTAGAAAAGTACAGATTAAGTACGCCAATATCTATCCAAAATATTAAATTATCAATAG
ATAAGTAAGCAAATCTGTCC

Downstream 100 bases:

>100_bases
AACTCTAATAGTGGCTTCAATTCACTTAGTTAAGGCTAGGCCAACCTAATGCAGAAAAGCTATACACAATGAGTAAGTTT
GAAGGAATATAACCATTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MTRKRRYAAKIIPLSDTFHVNTLFFYFSGASIKEYQPSSHQHQNVLRELIIRPNQNCLASFLKRCTNLNSTSWIETSILV
IGTFGFAVLMHIAPVRATPLKLMCSYIYEGKAYKEIYIVDPEKLLVEISYPFAPSEEDRNIIERLIVESISPVIVVARLQ
TSNSHYFKYEINKVNLEIKTFSVSLVAGVQAMTTRTCKRIKDAPSHQIKI

Sequences:

>Translated_210_residues
MTRKRRYAAKIIPLSDTFHVNTLFFYFSGASIKEYQPSSHQHQNVLRELIIRPNQNCLASFLKRCTNLNSTSWIETSILV
IGTFGFAVLMHIAPVRATPLKLMCSYIYEGKAYKEIYIVDPEKLLVEISYPFAPSEEDRNIIERLIVESISPVIVVARLQ
TSNSHYFKYEINKVNLEIKTFSVSLVAGVQAMTTRTCKRIKDAPSHQIKI
>Mature_209_residues
TRKRRYAAKIIPLSDTFHVNTLFFYFSGASIKEYQPSSHQHQNVLRELIIRPNQNCLASFLKRCTNLNSTSWIETSILVI
GTFGFAVLMHIAPVRATPLKLMCSYIYEGKAYKEIYIVDPEKLLVEISYPFAPSEEDRNIIERLIVESISPVIVVARLQT
SNSHYFKYEINKVNLEIKTFSVSLVAGVQAMTTRTCKRIKDAPSHQIKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24076; Mature: 23945

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRKRRYAAKIIPLSDTFHVNTLFFYFSGASIKEYQPSSHQHQNVLRELIIRPNQNCLAS
CCCCCCCEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHH
FLKRCTNLNSTSWIETSILVIGTFGFAVLMHIAPVRATPLKLMCSYIYEGKAYKEIYIVD
HHHHHCCCCCCCEEEEEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEC
PEKLLVEISYPFAPSEEDRNIIERLIVESISPVIVVARLQTSNSHYFKYEINKVNLEIKT
HHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEEEEEEEEEE
FSVSLVAGVQAMTTRTCKRIKDAPSHQIKI
EEEEEHHHHHHHHHHHHHHHHCCCCCEECC
>Mature Secondary Structure 
TRKRRYAAKIIPLSDTFHVNTLFFYFSGASIKEYQPSSHQHQNVLRELIIRPNQNCLAS
CCCCCCEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHH
FLKRCTNLNSTSWIETSILVIGTFGFAVLMHIAPVRATPLKLMCSYIYEGKAYKEIYIVD
HHHHHCCCCCCCEEEEEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEC
PEKLLVEISYPFAPSEEDRNIIERLIVESISPVIVVARLQTSNSHYFKYEINKVNLEIKT
HHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEEEEEEEEEE
FSVSLVAGVQAMTTRTCKRIKDAPSHQIKI
EEEEEHHHHHHHHHHHHHHHHCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA