| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266121
Identifier: 32266121
GI number: 32266121
Start: 600012
End: 600998
Strand: Direct
Name: 32266121
Synonym: HH0622
Alternate gene names: NA
Gene position: 600012-600998 (Clockwise)
Preceding gene: 32266120
Following gene: 32266122
Centisome position: 33.35
GC content: 30.6
Gene sequence:
>987_bases ATGAATGAACCTAGAGATTTAAAATCCGTTAAGGCATTTTTACTGCGACACGGACATACCAAAGAAGAAATAGAGCGTCT TGATAAAGAAAGCGTTATAAATCTATATGAAAAGGATACTCGCAAAAATACGCTTAATTTTTTACACTATATGAACGAAG ATACTTTCTCAGTAATAAGCACGCTTGATGAAGCTGATATTGGTGAATTTAAACTCAAAGTGCAAGAAAATTTAGATAAT ATGGCTATTCTTGTTGATATTATTAGAGATGGTTTTAATGATTTTAGTTATGCCGATATTGCTGATACTTTGACTTTAAA TATTAAAAATATCTCTATCCACAAACTTCAAAGAATCTTGCGTATTGCTTATCGCGAGTTCCAAGAAATTCTCCTTGATA AAATCGCCACACAGCTTAAAGAATTGCCCATTGAAGAATATAAAACAATAATGAATCATTATGAAAGCATTCGCGGTGAT ACTGCTCGTCTTAGAAGCACTATTCAGGAGCTTTCTGATGAAAAAAAGCGACAGCAAATTCTAGATATGGCACGTTTTAA ACTTCTTATTGTAAAAGATTTTATGTCAAAAAATACTTTTAATGATGTTTATAAAGAGTATCTTAATAATACTCCTGAAA AGCTTAAGCTTGTGGAAGATATCCTCATTCTTACAGGTATGTATTCCAAAAATTATCTCAAAAACGTTCCTATGGAAGAA CTTGAAGATATGAAAGCAAAACTTCTTGAACATAAACGACAAGATGAAAGAGACCATAAAATATTTACTCAATACACTCA AATGCTTGATGAATCTATGTATGGCTCTAATGAACAAGAATTTAGCGATGTGTGTGTAAAAATTATTACAGGACTTAATC AAAAACAGATTCTAATGATAAGTGATTATTTAAGCGCAAAAAATCCAGTCTTTGTCAATCGTTTTAACACACTTTTGCGA GATTTTAAAAATAGCCTAAAAAATTAA
Upstream 100 bases:
>100_bases TTGCGCTACATCTTTTTGCCTTACAAAATGGAGCAAGTATTTTGCGCATACACGATGAAGATGAGCATATTGATATGCTT AAAATGTATAAGGCGATGCA
Downstream 100 bases:
>100_bases AATATAAATCATAAAAAAATGAAAAATACACTATAATAAACCCTCACAAAATCAAACAAGGATTGTAAATAATGAAGTAT CTGTGCGCTTTTCTGCTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MNEPRDLKSVKAFLLRHGHTKEEIERLDKESVINLYEKDTRKNTLNFLHYMNEDTFSVISTLDEADIGEFKLKVQENLDN MAILVDIIRDGFNDFSYADIADTLTLNIKNISIHKLQRILRIAYREFQEILLDKIATQLKELPIEEYKTIMNHYESIRGD TARLRSTIQELSDEKKRQQILDMARFKLLIVKDFMSKNTFNDVYKEYLNNTPEKLKLVEDILILTGMYSKNYLKNVPMEE LEDMKAKLLEHKRQDERDHKIFTQYTQMLDESMYGSNEQEFSDVCVKIITGLNQKQILMISDYLSAKNPVFVNRFNTLLR DFKNSLKN
Sequences:
>Translated_328_residues MNEPRDLKSVKAFLLRHGHTKEEIERLDKESVINLYEKDTRKNTLNFLHYMNEDTFSVISTLDEADIGEFKLKVQENLDN MAILVDIIRDGFNDFSYADIADTLTLNIKNISIHKLQRILRIAYREFQEILLDKIATQLKELPIEEYKTIMNHYESIRGD TARLRSTIQELSDEKKRQQILDMARFKLLIVKDFMSKNTFNDVYKEYLNNTPEKLKLVEDILILTGMYSKNYLKNVPMEE LEDMKAKLLEHKRQDERDHKIFTQYTQMLDESMYGSNEQEFSDVCVKIITGLNQKQILMISDYLSAKNPVFVNRFNTLLR DFKNSLKN >Mature_328_residues MNEPRDLKSVKAFLLRHGHTKEEIERLDKESVINLYEKDTRKNTLNFLHYMNEDTFSVISTLDEADIGEFKLKVQENLDN MAILVDIIRDGFNDFSYADIADTLTLNIKNISIHKLQRILRIAYREFQEILLDKIATQLKELPIEEYKTIMNHYESIRGD TARLRSTIQELSDEKKRQQILDMARFKLLIVKDFMSKNTFNDVYKEYLNNTPEKLKLVEDILILTGMYSKNYLKNVPMEE LEDMKAKLLEHKRQDERDHKIFTQYTQMLDESMYGSNEQEFSDVCVKIITGLNQKQILMISDYLSAKNPVFVNRFNTLLR DFKNSLKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38833; Mature: 38833
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEPRDLKSVKAFLLRHGHTKEEIERLDKESVINLYEKDTRKNTLNFLHYMNEDTFSVIS CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH TLDEADIGEFKLKVQENLDNMAILVDIIRDGFNDFSYADIADTLTLNIKNISIHKLQRIL HHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCHHHHHHHHH RIAYREFQEILLDKIATQLKELPIEEYKTIMNHYESIRGDTARLRSTIQELSDEKKRQQI HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LDMARFKLLIVKDFMSKNTFNDVYKEYLNNTPEKLKLVEDILILTGMYSKNYLKNVPMEE HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LEDMKAKLLEHKRQDERDHKIFTQYTQMLDESMYGSNEQEFSDVCVKIITGLNQKQILMI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEE SDYLSAKNPVFVNRFNTLLRDFKNSLKN HHHHCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNEPRDLKSVKAFLLRHGHTKEEIERLDKESVINLYEKDTRKNTLNFLHYMNEDTFSVIS CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH TLDEADIGEFKLKVQENLDNMAILVDIIRDGFNDFSYADIADTLTLNIKNISIHKLQRIL HHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCHHHHHHHHH RIAYREFQEILLDKIATQLKELPIEEYKTIMNHYESIRGDTARLRSTIQELSDEKKRQQI HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LDMARFKLLIVKDFMSKNTFNDVYKEYLNNTPEKLKLVEDILILTGMYSKNYLKNVPMEE HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LEDMKAKLLEHKRQDERDHKIFTQYTQMLDESMYGSNEQEFSDVCVKIITGLNQKQILMI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEE SDYLSAKNPVFVNRFNTLLRDFKNSLKN HHHHCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA