| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348076
Identifier: 29348076
GI number: 29348076
Start: 3322197
End: 3322850
Strand: Reverse
Name: 29348076
Synonym: BT_2666
Alternate gene names: NA
Gene position: 3322850-3322197 (Counterclockwise)
Preceding gene: 29348077
Following gene: 29348075
Centisome position: 53.08
GC content: 41.9
Gene sequence:
>654_bases ATGAGTGCTGAAGTACAAGAGAGCAGCGGAAAAAGAGGAAAAGGCAAGCAGAAGAAAATGACTGTCCGGGTAGACTTTAC CCCGATGGTGGATATGAACATGTTGCTGATTACTTTCTTTATGCTTTGTACCACGCTGAGCAAGCCTCAGACGATGGAAA TAAGCATGCCGAGCAATGACAAGGATATAACTGAACAACAAAAGAGTATGGTGAAAGCCTCTCAGGCAATTACATTATTG CTGGGAGCCGATAACAAGCTCTATTACTATGAGGGAGAGCCTAACTACAAGGATTACACCTCATTGAAAGAGACTAGTTA CGGGGCAAGCGGGTTACGTGCCGTACTTCTTCAGAAAAATGCTGCAGCTGTCAATCAGGTAAGAGCTTTGAAACAACAGA AGCTCGATCTGAAGATAACAGATGACGAATACAAAAAGAAGGTTTCCGAAATAAAAAGCGGAAAAAATACGCCGACCGTC ATTATCAAGGCGACGGATGATGCTTCTTATATGAATCTGATTGATGCATTGGACGAGATGCAGATATGTAATATAGGTAA ATATGTGATAACGGATATTGCCGAAGCTGATGAGTTCCTGATTAAGAATTATGATGCTAAGGGAGAACTGTCACAGAACT TGGCCGATAAATGA
Upstream 100 bases:
>100_bases AAAGAACGTAATGAACTCACTTCAGGATTTGCGGGAAAATCGGTATAATCTGATTACTTCTCTCAAAGCAGAATCTGAAA ATTAAAAGGGAGGAAAGACA
Downstream 100 bases:
>100_bases TGTAACACCTAAAAAAAGAAAGTAAAATGGCAAAATTAGATTTAGCTTCTTCGGAATGGTGTCAGCTGATTTTTGAAGGC AAGAATCAAGCGTACGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transport Energizing Protein ExbD/lR Family; Outer Membrane Transport Energization Protein Exbd; Biopolymer Transport ExbD Protein; Biopolymer Transport Protein Exbd/lr
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSAEVQESSGKRGKGKQKKMTVRVDFTPMVDMNMLLITFFMLCTTLSKPQTMEISMPSNDKDITEQQKSMVKASQAITLL LGADNKLYYYEGEPNYKDYTSLKETSYGASGLRAVLLQKNAAAVNQVRALKQQKLDLKITDDEYKKKVSEIKSGKNTPTV IIKATDDASYMNLIDALDEMQICNIGKYVITDIAEADEFLIKNYDAKGELSQNLADK
Sequences:
>Translated_217_residues MSAEVQESSGKRGKGKQKKMTVRVDFTPMVDMNMLLITFFMLCTTLSKPQTMEISMPSNDKDITEQQKSMVKASQAITLL LGADNKLYYYEGEPNYKDYTSLKETSYGASGLRAVLLQKNAAAVNQVRALKQQKLDLKITDDEYKKKVSEIKSGKNTPTV IIKATDDASYMNLIDALDEMQICNIGKYVITDIAEADEFLIKNYDAKGELSQNLADK >Mature_216_residues SAEVQESSGKRGKGKQKKMTVRVDFTPMVDMNMLLITFFMLCTTLSKPQTMEISMPSNDKDITEQQKSMVKASQAITLLL GADNKLYYYEGEPNYKDYTSLKETSYGASGLRAVLLQKNAAAVNQVRALKQQKLDLKITDDEYKKKVSEIKSGKNTPTVI IKATDDASYMNLIDALDEMQICNIGKYVITDIAEADEFLIKNYDAKGELSQNLADK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24298; Mature: 24167
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEVQESSGKRGKGKQKKMTVRVDFTPMVDMNMLLITFFMLCTTLSKPQTMEISMPSND CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC KDITEQQKSMVKASQAITLLLGADNKLYYYEGEPNYKDYTSLKETSYGASGLRAVLLQKN CHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHCC AAAVNQVRALKQQKLDLKITDDEYKKKVSEIKSGKNTPTVIIKATDDASYMNLIDALDEM HHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHH QICNIGKYVITDIAEADEFLIKNYDAKGELSQNLADK HHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC >Mature Secondary Structure SAEVQESSGKRGKGKQKKMTVRVDFTPMVDMNMLLITFFMLCTTLSKPQTMEISMPSND CCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC KDITEQQKSMVKASQAITLLLGADNKLYYYEGEPNYKDYTSLKETSYGASGLRAVLLQKN CHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHCC AAAVNQVRALKQQKLDLKITDDEYKKKVSEIKSGKNTPTVIIKATDDASYMNLIDALDEM HHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHH QICNIGKYVITDIAEADEFLIKNYDAKGELSQNLADK HHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA