Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29348004

Identifier: 29348004

GI number: 29348004

Start: 3235241

End: 3235828

Strand: Reverse

Name: 29348004

Synonym: BT_2594

Alternate gene names: NA

Gene position: 3235828-3235241 (Counterclockwise)

Preceding gene: 29348005

Following gene: 29348003

Centisome position: 51.69

GC content: 47.11

Gene sequence:

>588_bases
ATGAGAATGACCGGAAAATTTGTGTTGCTGCTTGCGGCTATGCTTGCCCTGTTTCTGGGGCAGGCGCAGGCCCAACGCTG
CCTGCCGGGTATGAAAGGTGTGCAGCTAATGGCGGATATGGTTGACGGTTTTTATTGCGGGAAGGAACGTAATGATACGG
GATTCGCTTTCGGACTTGCCGTTTCTACCTATGCTAAGGGAGGAAATAAATGGGCATCGGGTATTGAAATCATGCGGCGG
TATTATCCCTACCGTAATACACGTATCCCTTTGGAGCAGTATACTGCGGAAGGCGGCTACTATTACAATTTCTTTTCCGA
CCCAGGGAAAAATGTATTTCTGAATATTGGTGCTTCAGGATTGATGGGGTATGAAACTGTAAACGGTGGAAAGGGATTGC
TCTTTGACGGTGCCGTCCTGAAAAAACATGAATCGTTCATTTATGGCGGTGCAGTGACACTGGAAGCGGAAACTTATCTT
TCAGACAAGGTCGTCCTGTTACTGCGTCTTCGTGAACGTGTTCTTTGGGGGAGTGCCGCAAAGCACTTCTATACCCAATA
TGGCTTGGGCATCAAATACATTTTATAA

Upstream 100 bases:

>100_bases
TGGTGGAGATGTATGAGAAACAGGGAGGACGCCACCAGATGTTTGAGGTGGATAATGAGTCCCTTGTGCGTGCTGAACCC
GTCAACGAATTGAAGGTACG

Downstream 100 bases:

>100_bases
TGACTAAATCCATACGAAAAATGAAAAAGATACTTGATCAGATAATGATATTGTGCTGCATGGCAGCCGCCTTGTTTTGT
TTTACCTTTTGTAGTGATGA

Product: conjugate transposon protein

Products: NA

Alternate protein names: Conserved Protein Found In Conjugate Transposon TraO; Transfer Complex Protein TraO; Conjugate Transposon Protein; Conjugative Transposon Protein Trao

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MRMTGKFVLLLAAMLALFLGQAQAQRCLPGMKGVQLMADMVDGFYCGKERNDTGFAFGLAVSTYAKGGNKWASGIEIMRR
YYPYRNTRIPLEQYTAEGGYYYNFFSDPGKNVFLNIGASGLMGYETVNGGKGLLFDGAVLKKHESFIYGGAVTLEAETYL
SDKVVLLLRLRERVLWGSAAKHFYTQYGLGIKYIL

Sequences:

>Translated_195_residues
MRMTGKFVLLLAAMLALFLGQAQAQRCLPGMKGVQLMADMVDGFYCGKERNDTGFAFGLAVSTYAKGGNKWASGIEIMRR
YYPYRNTRIPLEQYTAEGGYYYNFFSDPGKNVFLNIGASGLMGYETVNGGKGLLFDGAVLKKHESFIYGGAVTLEAETYL
SDKVVLLLRLRERVLWGSAAKHFYTQYGLGIKYIL
>Mature_195_residues
MRMTGKFVLLLAAMLALFLGQAQAQRCLPGMKGVQLMADMVDGFYCGKERNDTGFAFGLAVSTYAKGGNKWASGIEIMRR
YYPYRNTRIPLEQYTAEGGYYYNFFSDPGKNVFLNIGASGLMGYETVNGGKGLLFDGAVLKKHESFIYGGAVTLEAETYL
SDKVVLLLRLRERVLWGSAAKHFYTQYGLGIKYIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21706; Mature: 21706

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMTGKFVLLLAAMLALFLGQAQAQRCLPGMKGVQLMADMVDGFYCGKERNDTGFAFGLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCCCCEEEHHH
VSTYAKGGNKWASGIEIMRRYYPYRNTRIPLEQYTAEGGYYYNFFSDPGKNVFLNIGASG
HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEEECCCCCEEEEEECCCC
LMGYETVNGGKGLLFDGAVLKKHESFIYGGAVTLEAETYLSDKVVLLLRLRERVLWGSAA
CCCEEECCCCCCEEECCHHHHHCCCEEECCEEEEEHHHHHCHHHHHHHHHHHHHHHHHHH
KHFYTQYGLGIKYIL
HHHHHHHCCCEEEEC
>Mature Secondary Structure
MRMTGKFVLLLAAMLALFLGQAQAQRCLPGMKGVQLMADMVDGFYCGKERNDTGFAFGLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCCCCEEEHHH
VSTYAKGGNKWASGIEIMRRYYPYRNTRIPLEQYTAEGGYYYNFFSDPGKNVFLNIGASG
HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEEECCCCCEEEEEECCCC
LMGYETVNGGKGLLFDGAVLKKHESFIYGGAVTLEAETYLSDKVVLLLRLRERVLWGSAA
CCCEEECCCCCCEEECCHHHHHCCCEEECCEEEEEHHHHHCHHHHHHHHHHHHHHHHHHH
KHFYTQYGLGIKYIL
HHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA