| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347170
Identifier: 29347170
GI number: 29347170
Start: 2174963
End: 2176534
Strand: Reverse
Name: 29347170
Synonym: BT_1760
Alternate gene names: NA
Gene position: 2176534-2174963 (Counterclockwise)
Preceding gene: 29347171
Following gene: 29347169
Centisome position: 34.77
GC content: 46.88
Gene sequence:
>1572_bases ATGATGAAAAATATGATCTTACCTATAGCATTTACCGCACTGATAGCTTCGATGACTGCTTGCAGTGACGAGACTGACCC CATCTTGACTCAGAAAAACTGGGACGGTACAGCCACATACTTCCAATCGAGTGATGAGCATGGCTTCTCGATGTACTATA AGCCACAGGTCGGCTTTGTAGGTGACCCGATGCCATTCTATGATCCGGTTGCCAAGGACTTTAAAGTGATGTACCTGCAA GATTACCGTCCGAACCCCGAAGCTACGTACCATCCCATTTTCGGGGTGGCTACCAAAGACGGTGCTACTTACGAATCTCT CGGCGAACTGATTTCCTGCGGAGGGCGTGACGAACAGGATGCTGCCATCGGCACAGGAGGAACGATCTATAACCCTGCCG ACAAACTGTATTATACCTTCTACACCGGTAATAAGTTCAAGCCTTCTTCCGACCAGAATGCTCAGGTAGTGATGGTAGCT ACTTCTCCCGATTTCAAGACATGGACCAAGAACCGTACCTTCTACCTGAAAGGAGATACGTATGGTTATGACAAGAATGA CTTCCGTGACCCGTTCCTGTTCCAGACCGAAGACGGTGTGTATCACATGCTGATCGCTACCCGCAAGAACGGAAAAGGGC ATATCGCCGAATTTACCTCTGCCGACCTGAAAGAGTGGGAATCTGCCGGAACCTTTATGACCATGATGTGGGATCGTTTC TACGAATGTCCGGATGTATTCAAGATGGGGGACTGGTGGTATCTGATTTATTCGGAACAGGCTTCCTTCATGCGTAAAGT ACAATATTTCAAAGGCAGAACGCTGGAAGATTTGAAAGCAACTACCGCCAATGATGCCGGAATATGGCCGGACAATCGTG AAGGAATGCTGGACAGCCGCGCATTCTATGCCGGAAAGACCGCTTCCGACGGAACAAACCGCTACATTTGGGGTTGGTGT CCCACACGTGCCGGAAATGATAATGGAAATGTTGGTGATGTAGAACCCGAATGGGCAGGCAATCTGGTAGCACAACGTCT GATTCAACACGAAGACGGTACTTTAACCCTCGGAGTACCCGATGCAATCGACCGTAAATACACTTCCGCACAAGAAGTGA AAGTAATGGCAAAAGATGGTAACATGATCGAAAGCGGTAAAACCTATACTTTGGGCGAAGGTGCCTCCGTCATCTTCAAC CGTCTGAAAGTACATAACAAGATTTCTTTCACCGTAAAGACCGCTTCGAATACGGACCGTTTCGGAATCTCTTTTGTACG TGGAACGGATTCCGCTTCCTGGTATAGTATCCATGTCAATGCCGATGAAGGCAAAGCGAATTTTGAGAAAGACGGTGACG ATGCCAAATACTTATTCGATAATAAATTCAATATTCCGGCAGATAATGAATATCGTGTGACGATTTACAGTGACCAGTCC GTCTGCGTGACTTATATCAACGACCAGTTATCTTTCACCAACCGTATCTACCAAATGCAGAAGAACCCGTGGTCACTCTG CTGTTATAAAGGTGAAATAACTGTATCAGACGTTCAGGTAAGCACTTATTGA
Upstream 100 bases:
>100_bases CAAGGGAGTAGACGCTTCTGCCGACTACTATCACTACAACGTAGAGCAAATGACTCTCAATGCAATCAACTACTTGTGTA AATAAAAAGAATAAGCAACA
Downstream 100 bases:
>100_bases TGAAAACTACACCGGCAAGTAACATCTTTTACAGCGTTTGAAACAAAAGTGATAGGCGCTAACCTTGGAAGCGCCTATCT TTGCACTGTAACAACTATCA
Product: glycosylhydrolase
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Glycoside Hydrolase; Glycosyl Hydrolase; Family; Beta-Fructofuranosidase Protein; Glycoside Hydrolase Family Protein
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MMKNMILPIAFTALIASMTACSDETDPILTQKNWDGTATYFQSSDEHGFSMYYKPQVGFVGDPMPFYDPVAKDFKVMYLQ DYRPNPEATYHPIFGVATKDGATYESLGELISCGGRDEQDAAIGTGGTIYNPADKLYYTFYTGNKFKPSSDQNAQVVMVA TSPDFKTWTKNRTFYLKGDTYGYDKNDFRDPFLFQTEDGVYHMLIATRKNGKGHIAEFTSADLKEWESAGTFMTMMWDRF YECPDVFKMGDWWYLIYSEQASFMRKVQYFKGRTLEDLKATTANDAGIWPDNREGMLDSRAFYAGKTASDGTNRYIWGWC PTRAGNDNGNVGDVEPEWAGNLVAQRLIQHEDGTLTLGVPDAIDRKYTSAQEVKVMAKDGNMIESGKTYTLGEGASVIFN RLKVHNKISFTVKTASNTDRFGISFVRGTDSASWYSIHVNADEGKANFEKDGDDAKYLFDNKFNIPADNEYRVTIYSDQS VCVTYINDQLSFTNRIYQMQKNPWSLCCYKGEITVSDVQVSTY
Sequences:
>Translated_523_residues MMKNMILPIAFTALIASMTACSDETDPILTQKNWDGTATYFQSSDEHGFSMYYKPQVGFVGDPMPFYDPVAKDFKVMYLQ DYRPNPEATYHPIFGVATKDGATYESLGELISCGGRDEQDAAIGTGGTIYNPADKLYYTFYTGNKFKPSSDQNAQVVMVA TSPDFKTWTKNRTFYLKGDTYGYDKNDFRDPFLFQTEDGVYHMLIATRKNGKGHIAEFTSADLKEWESAGTFMTMMWDRF YECPDVFKMGDWWYLIYSEQASFMRKVQYFKGRTLEDLKATTANDAGIWPDNREGMLDSRAFYAGKTASDGTNRYIWGWC PTRAGNDNGNVGDVEPEWAGNLVAQRLIQHEDGTLTLGVPDAIDRKYTSAQEVKVMAKDGNMIESGKTYTLGEGASVIFN RLKVHNKISFTVKTASNTDRFGISFVRGTDSASWYSIHVNADEGKANFEKDGDDAKYLFDNKFNIPADNEYRVTIYSDQS VCVTYINDQLSFTNRIYQMQKNPWSLCCYKGEITVSDVQVSTY >Mature_523_residues MMKNMILPIAFTALIASMTACSDETDPILTQKNWDGTATYFQSSDEHGFSMYYKPQVGFVGDPMPFYDPVAKDFKVMYLQ DYRPNPEATYHPIFGVATKDGATYESLGELISCGGRDEQDAAIGTGGTIYNPADKLYYTFYTGNKFKPSSDQNAQVVMVA TSPDFKTWTKNRTFYLKGDTYGYDKNDFRDPFLFQTEDGVYHMLIATRKNGKGHIAEFTSADLKEWESAGTFMTMMWDRF YECPDVFKMGDWWYLIYSEQASFMRKVQYFKGRTLEDLKATTANDAGIWPDNREGMLDSRAFYAGKTASDGTNRYIWGWC PTRAGNDNGNVGDVEPEWAGNLVAQRLIQHEDGTLTLGVPDAIDRKYTSAQEVKVMAKDGNMIESGKTYTLGEGASVIFN RLKVHNKISFTVKTASNTDRFGISFVRGTDSASWYSIHVNADEGKANFEKDGDDAKYLFDNKFNIPADNEYRVTIYSDQS VCVTYINDQLSFTNRIYQMQKNPWSLCCYKGEITVSDVQVSTY
Specific function: Unknown
COG id: COG1621
COG function: function code G; Beta-fructosidases (levanase/invertase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59241; Mature: 59241
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKNMILPIAFTALIASMTACSDETDPILTQKNWDGTATYFQSSDEHGFSMYYKPQVGFV CCCCEEHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEECCCCCCCEEEEECCCCCCC GDPMPFYDPVAKDFKVMYLQDYRPNPEATYHPIFGVATKDGATYESLGELISCGGRDEQD CCCCCCCCCCCCCEEEEEEEECCCCCCCEECCEEEEEECCCCCHHHHHHHHHCCCCCCCC AAIGTGGTIYNPADKLYYTFYTGNKFKPSSDQNAQVVMVATSPDFKTWTKNRTFYLKGDT CEEECCCCEECCCCCEEEEEEECCEECCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCC YGYDKNDFRDPFLFQTEDGVYHMLIATRKNGKGHIAEFTSADLKEWESAGTFMTMMWDRF CCCCCCCCCCCCEEEECCCEEEEEEEEECCCCCCEEECCHHHHHHHHHCCCCHHHHHHHH YECPDVFKMGDWWYLIYSEQASFMRKVQYFKGRTLEDLKATTANDAGIWPDNREGMLDSR CCCCCCEECCCEEEEEECCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC AFYAGKTASDGTNRYIWGWCPTRAGNDNGNVGDVEPEWAGNLVAQRLIQHEDGTLTLGVP EEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC DAIDRKYTSAQEVKVMAKDGNMIESGKTYTLGEGASVIFNRLKVHNKISFTVKTASNTDR HHHHHCCCCCHHEEEEECCCCEEECCCEEEECCCHHHHHHHHHHCCEEEEEEEECCCCCC FGISFVRGTDSASWYSIHVNADEGKANFEKDGDDAKYLFDNKFNIPADNEYRVTIYSDQS CEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCC VCVTYINDQLSFTNRIYQMQKNPWSLCCYKGEITVSDVQVSTY EEEEEECCCHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEECC >Mature Secondary Structure MMKNMILPIAFTALIASMTACSDETDPILTQKNWDGTATYFQSSDEHGFSMYYKPQVGFV CCCCEEHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEECCCCCCCEEEEECCCCCCC GDPMPFYDPVAKDFKVMYLQDYRPNPEATYHPIFGVATKDGATYESLGELISCGGRDEQD CCCCCCCCCCCCCEEEEEEEECCCCCCCEECCEEEEEECCCCCHHHHHHHHHCCCCCCCC AAIGTGGTIYNPADKLYYTFYTGNKFKPSSDQNAQVVMVATSPDFKTWTKNRTFYLKGDT CEEECCCCEECCCCCEEEEEEECCEECCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCC YGYDKNDFRDPFLFQTEDGVYHMLIATRKNGKGHIAEFTSADLKEWESAGTFMTMMWDRF CCCCCCCCCCCCEEEECCCEEEEEEEEECCCCCCEEECCHHHHHHHHHCCCCHHHHHHHH YECPDVFKMGDWWYLIYSEQASFMRKVQYFKGRTLEDLKATTANDAGIWPDNREGMLDSR CCCCCCEECCCEEEEEECCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC AFYAGKTASDGTNRYIWGWCPTRAGNDNGNVGDVEPEWAGNLVAQRLIQHEDGTLTLGVP EEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC DAIDRKYTSAQEVKVMAKDGNMIESGKTYTLGEGASVIFNRLKVHNKISFTVKTASNTDR HHHHHCCCCCHHEEEEECCCCEEECCCEEEECCCHHHHHHHHHHCCEEEEEEEECCCCCC FGISFVRGTDSASWYSIHVNADEGKANFEKDGDDAKYLFDNKFNIPADNEYRVTIYSDQS CEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCC VCVTYINDQLSFTNRIYQMQKNPWSLCCYKGEITVSDVQVSTY EEEEEECCCHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA