Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346776

Identifier: 29346776

GI number: 29346776

Start: 1694426

End: 1696003

Strand: Reverse

Name: 29346776

Synonym: BT_1366

Alternate gene names: NA

Gene position: 1696003-1694426 (Counterclockwise)

Preceding gene: 29346777

Following gene: 29346774

Centisome position: 27.09

GC content: 46.7

Gene sequence:

>1578_bases
ATGAAACTTCGTACGATAGTGAAAATAGCGATCACTTCTTCTGTTGTACTTTTGTGCTCAGGTTTTGCGTTGTACTCTTT
TTTTAGGTTGTCGGCTGCCGAAGATCAGAAAGATTTTGATCTCTATACCTTGGTTCCGTCCTCTGTTTCAGCAGTGTTTG
CGACGGAAGATGTAGCCGAATTTGTAATGGAAGTGGATGAGCTGACCTGTAGTCGGGATCACCAGTATCTTTATGTTTCC
AAACTCTTTTCTTATCTGAAACAATATCTTTATTCTCTTCTCGAAGATGCTCCTCACGGTCTGAGCAGGCAAATGAATCA
GATGCTGATCAGTTTCCATGAGCCGGACAATGATCGTAATCAGGTGCTTTACTGCCGGTTGGGGAATGGAGACCGTGCGC
TGATCGACCGTTTTGTGCAGAAATATGTTTCGTCGGGCTATCCTCCGAAAACATTCGATTATAAGGGTGAAGATATCATT
ATCTATCCGATGGCGGACGGTGATTTTCTCGCCTGCTATCTGACGGAAGACTTTCTGGTGCTCAGTTGTCAGAAAAAGCT
GATAGAGGAGGTGATAGATATCCGCAAAACCGGCAAGTCGCTGGCTGCCGACTCTGCTTTTAAAGAAGTGCGGGCGCCGA
AGAAAAGTCCGACTGTTGCTACCGTCTACACTCGTCTGGCAGGAATGATGGGATGGACGGAGTTTGATATGAAGCTGAAG
GATGATTTCATTTATTTCTCCGGAGTCAGCCATTATGTAGATACTTGTTTTAACTTTATAAATGTAATCCGCCAGCAGGA
ATCTGTCAAAGGATTTCCGGGCGAGACACTGCCTTCCACTGCTTTTTATTTCAGTAAACAGGGCATTACGGACTGGGCAT
CCCTGCTTTCCTATGGCGGTACGCAGGAATATGCGACGGCAGGCAGAACGAGTGAAGTGCTGAATCGGGATCGGGAATTG
TCACGTTATCTGGCAGAGAATACGGGGCAGGATTTGGTGGCTTGTCTTTTCCAGCGGGAAGACTCTCTGATGGGGCCTGC
GGCTGTTTTAAGTCTCTCGGTGATGGATGTGGCTGAGGCGGAAAGGATGTTGCGCTCTTTGGTAAATACGGCTCCGGCAG
AGGAAGGAACAGGCCGGAATTCACGTATAACTTTTTGTTATACTCCCTCTAAAGCATACCCTGTGTACAGGTTGCCTCAA
ACAACGTTGTTTACGCAACTAACCAGTTTTGTAGAGCCGTCCTTGCATGTTTTCGCTACATTTTATGGCGGACGTTTACT
GCTTGCCCCCGATGAAGATAGTTTGTCACGATATATCCGCCAGCTGGATAATGACGAAGTGCTTGACGGCGCTTTGGCTT
ATCGGGCGGGGACGGACGGATTGTCCGATTCGTATCATTTCATGTTGATGGCGGACTTTGGACACGTACTCGAACAGTCC
GGACATCAGGTTCATTATGTGCCGGAATTCTTTCTCCGCAACTCCGAATTTTTCCGTAATTTCATTCTTTTTGCGCAGTT
TACTTGTGCGGACGGGGTGGTTTATCCCAACATTGTTTTGAAGTATAAATCCGAATAG

Upstream 100 bases:

>100_bases
TGGAAATCATTTTCTGATTATTGGTGATTTTTTTAGCAAAAGTTTTGTTTTCTTTGTAGAAATTATTATTTTTGCCCCTA
GCCGATAAACAGCAAATATT

Downstream 100 bases:

>100_bases
AATTCGATGAAAAAAACAGGCGAAAAATAGAGGGGAAAAACAACTCTTAATTTGTGAAACTAAAAGCTCTGAAACGCCTT
CTGGCAGGGCGCGAAAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MKLRTIVKIAITSSVVLLCSGFALYSFFRLSAAEDQKDFDLYTLVPSSVSAVFATEDVAEFVMEVDELTCSRDHQYLYVS
KLFSYLKQYLYSLLEDAPHGLSRQMNQMLISFHEPDNDRNQVLYCRLGNGDRALIDRFVQKYVSSGYPPKTFDYKGEDII
IYPMADGDFLACYLTEDFLVLSCQKKLIEEVIDIRKTGKSLAADSAFKEVRAPKKSPTVATVYTRLAGMMGWTEFDMKLK
DDFIYFSGVSHYVDTCFNFINVIRQQESVKGFPGETLPSTAFYFSKQGITDWASLLSYGGTQEYATAGRTSEVLNRDREL
SRYLAENTGQDLVACLFQREDSLMGPAAVLSLSVMDVAEAERMLRSLVNTAPAEEGTGRNSRITFCYTPSKAYPVYRLPQ
TTLFTQLTSFVEPSLHVFATFYGGRLLLAPDEDSLSRYIRQLDNDEVLDGALAYRAGTDGLSDSYHFMLMADFGHVLEQS
GHQVHYVPEFFLRNSEFFRNFILFAQFTCADGVVYPNIVLKYKSE

Sequences:

>Translated_525_residues
MKLRTIVKIAITSSVVLLCSGFALYSFFRLSAAEDQKDFDLYTLVPSSVSAVFATEDVAEFVMEVDELTCSRDHQYLYVS
KLFSYLKQYLYSLLEDAPHGLSRQMNQMLISFHEPDNDRNQVLYCRLGNGDRALIDRFVQKYVSSGYPPKTFDYKGEDII
IYPMADGDFLACYLTEDFLVLSCQKKLIEEVIDIRKTGKSLAADSAFKEVRAPKKSPTVATVYTRLAGMMGWTEFDMKLK
DDFIYFSGVSHYVDTCFNFINVIRQQESVKGFPGETLPSTAFYFSKQGITDWASLLSYGGTQEYATAGRTSEVLNRDREL
SRYLAENTGQDLVACLFQREDSLMGPAAVLSLSVMDVAEAERMLRSLVNTAPAEEGTGRNSRITFCYTPSKAYPVYRLPQ
TTLFTQLTSFVEPSLHVFATFYGGRLLLAPDEDSLSRYIRQLDNDEVLDGALAYRAGTDGLSDSYHFMLMADFGHVLEQS
GHQVHYVPEFFLRNSEFFRNFILFAQFTCADGVVYPNIVLKYKSE
>Mature_525_residues
MKLRTIVKIAITSSVVLLCSGFALYSFFRLSAAEDQKDFDLYTLVPSSVSAVFATEDVAEFVMEVDELTCSRDHQYLYVS
KLFSYLKQYLYSLLEDAPHGLSRQMNQMLISFHEPDNDRNQVLYCRLGNGDRALIDRFVQKYVSSGYPPKTFDYKGEDII
IYPMADGDFLACYLTEDFLVLSCQKKLIEEVIDIRKTGKSLAADSAFKEVRAPKKSPTVATVYTRLAGMMGWTEFDMKLK
DDFIYFSGVSHYVDTCFNFINVIRQQESVKGFPGETLPSTAFYFSKQGITDWASLLSYGGTQEYATAGRTSEVLNRDREL
SRYLAENTGQDLVACLFQREDSLMGPAAVLSLSVMDVAEAERMLRSLVNTAPAEEGTGRNSRITFCYTPSKAYPVYRLPQ
TTLFTQLTSFVEPSLHVFATFYGGRLLLAPDEDSLSRYIRQLDNDEVLDGALAYRAGTDGLSDSYHFMLMADFGHVLEQS
GHQVHYVPEFFLRNSEFFRNFILFAQFTCADGVVYPNIVLKYKSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59485; Mature: 59485

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRTIVKIAITSSVVLLCSGFALYSFFRLSAAEDQKDFDLYTLVPSSVSAVFATEDVAE
CCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHH
FVMEVDELTCSRDHQYLYVSKLFSYLKQYLYSLLEDAPHGLSRQMNQMLISFHEPDNDRN
HHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCCCC
QVLYCRLGNGDRALIDRFVQKYVSSGYPPKTFDYKGEDIIIYPMADGDFLACYLTEDFLV
EEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCHHH
LSCQKKLIEEVIDIRKTGKSLAADSAFKEVRAPKKSPTVATVYTRLAGMMGWTEFDMKLK
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHCCCEEC
DDFIYFSGVSHYVDTCFNFINVIRQQESVKGFPGETLPSTAFYFSKQGITDWASLLSYGG
CCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEECCCHHHHHHHHHCCC
TQEYATAGRTSEVLNRDRELSRYLAENTGQDLVACLFQREDSLMGPAAVLSLSVMDVAEA
CHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ERMLRSLVNTAPAEEGTGRNSRITFCYTPSKAYPVYRLPQTTLFTQLTSFVEPSLHVFAT
HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHHCCCHHEEEE
FYGGRLLLAPDEDSLSRYIRQLDNDEVLDGALAYRAGTDGLSDSYHFMLMADFGHVLEQS
EECCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHC
GHQVHYVPEFFLRNSEFFRNFILFAQFTCADGVVYPNIVLKYKSE
CCEEEECHHHHHCCHHHHHHHHHHHEEHHCCCEEECCEEEEECCC
>Mature Secondary Structure
MKLRTIVKIAITSSVVLLCSGFALYSFFRLSAAEDQKDFDLYTLVPSSVSAVFATEDVAE
CCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHH
FVMEVDELTCSRDHQYLYVSKLFSYLKQYLYSLLEDAPHGLSRQMNQMLISFHEPDNDRN
HHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCCCC
QVLYCRLGNGDRALIDRFVQKYVSSGYPPKTFDYKGEDIIIYPMADGDFLACYLTEDFLV
EEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCHHH
LSCQKKLIEEVIDIRKTGKSLAADSAFKEVRAPKKSPTVATVYTRLAGMMGWTEFDMKLK
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHCCCEEC
DDFIYFSGVSHYVDTCFNFINVIRQQESVKGFPGETLPSTAFYFSKQGITDWASLLSYGG
CCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEECCCHHHHHHHHHCCC
TQEYATAGRTSEVLNRDRELSRYLAENTGQDLVACLFQREDSLMGPAAVLSLSVMDVAEA
CHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ERMLRSLVNTAPAEEGTGRNSRITFCYTPSKAYPVYRLPQTTLFTQLTSFVEPSLHVFAT
HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHHCCCHHEEEE
FYGGRLLLAPDEDSLSRYIRQLDNDEVLDGALAYRAGTDGLSDSYHFMLMADFGHVLEQS
EECCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHC
GHQVHYVPEFFLRNSEFFRNFILFAQFTCADGVVYPNIVLKYKSE
CCEEEECHHHHHCCHHHHHHHHHHHEEHHCCCEEECCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA