Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29345759

Identifier: 29345759

GI number: 29345759

Start: 419336

End: 421744

Strand: Reverse

Name: 29345759

Synonym: BT_0349

Alternate gene names: NA

Gene position: 421744-419336 (Counterclockwise)

Preceding gene: 29345760

Following gene: 29345758

Centisome position: 6.74

GC content: 46.49

Gene sequence:

>2409_bases
ATGAAAACCACCTCGTTCATACTTGCCCTTATTATATCCATCTCCATCGGAAAAGCCCAGACGAACCATCAGGTCTCTTA
CTTTTCCCTTCAAGATGTGAAGTTATTAAGCAGTCCTTTTCTGCAAGCTCAACAGACTGATTTACATTATATCTTAGCTC
TCGACCCGGACAGATTATCAGCTCCTTTCCTTCGCGAAGCCGGACTGACACCCAAAGCCCCAAGCTATACCAACTGGGAG
AATACAGGACTGGACGGTCACATCGGCGGACATTACCTTTCCGCACTTTCCATGATGTATGCCGCCACCGGAGATACGGC
GATATACCACCGTCTCAACTATATGCTCAACGAACTACACCGTGCACAGCAAGCTGTCGGCACAGGATTTATCGGAGGAA
CACCCGGTAGCCTCCAACTTTGGAAAGAAATCAAAGCAGGTGACATTCGTGCCGGAGGCTTCAGCTTAAACGGCAAATGG
GTACCCCTCTATAATATACACAAAACGTATGCCGGACTGCGGGACGCTTACCTGTATGCTCACAGCGATCTGGCACGTCA
GATGCTGATTGATCTTACCGACTGGATGATTGATATTACTTCCGGTCTTAGCGACAACCAAATGCAGGATATGCTCCGCA
GTGAACACGGCGGCTTAAATGAAACGTTTGCGGATGTAGCGGAAATAACAGGCGATAAGAAATACCTGAAACTGGCACGC
CGTTTCTCTCATAAAGTCATTCTCGACCCGCTTATCAAAAACGAAGACAGGTTAAACGGAATGCATGCCAACACACAAAT
TCCTAAAGTAATCGGATACAAACGGGTAGCCGAAGTTTCAAAGAATGACAAAGACTGGAATCATGCAGCAGAATGGGATC
ATGCAGCCCGTTTTTTCTGGAATACCGTAGTCAATCACCGTTCCGTGTGTATCGGCGGGAACAGCGTACGCGAACATTTT
CATCCATCGGACAACTTTACGTCTATGCTGAATGACGTTCAGGGACCGGAGACTTGCAATACTTACAACATGCTCCGGCT
GACCAAAATGCTTTATCAGAACTCCGGAGACGTTGACAACTCCAACAAACCGGACCCACGTTATGTAGATTATTATGAAC
GTGCACTCTACAATCATATCCTGTCATCACAAGAACCGGATAAAGGCGGATTCGTCTACTTTACTCCGATGCGTCCCGGA
CATTATCGGGTATACTCGCAACCGGAAACATCGATGTGGTGCTGTGTCGGTTCAGGCTTGGAAAATCATACCAAGTATGG
TGAATTTATTTATGCGCATCAACAAGATACGCTTTACGTCAATCTTTTTATTCCTTCACAACTGAACTGGAAAGAACAAG
GCGTTACATTAACGCAGGAAACTCTCTTCCCCGATGATGAAAAAGTTACCTTACGAATAGACAAAGCCGCTAAGAAGAAC
CTGACATTAATGATTCGTATACCGGAATGGGCAGGAAACTCAAAAGGGTATGAAATCACCATCAACGGTAAGAAACACCT
ATCTGACATACAGACGGGAGCCAGTACGTACCTCCCAATCCGGCGTAAGTGGAAAAAAGGAGATATGATCACCTTCCATC
TGCCTATGAAGGTCAGCCTGGAGCAGATTCCCGACAAGAAAGATTACTATGCTTTCTTATACGGTCCCATCGTTCTTGCA
ACTTCTACAGGAACAGAAAACCTTGACGGAATCTATGCAGACGACAGCCGCGGCGGTCACATTGCCCACGGTCGGCAAAC
ACCTTTGCAGGAGATCCCGATGCTGATCGGGAATCCCGATTCTATCCGCCATTCTCTTCACAAACTGAGCGGAAGCAAAC
TAGCTTTTAGTTATGATGGAAACGTTTATCCGACACAAAAGAGTAAATCACTGGAGCTTATTCCGTTTTTCCGCCTGCAT
AATTCCCGTTATGCCGTTTACTTCCGCCAAGCCAGTGAAGAACAGTTCAAAACGATTCAGGAAGAAATGGCTACAGCCGA
ACGGAAAGCGACCGAACTGGCGAACCGGACAGTTGACCTGATCTTCCCCGGTGAACAGCAACCGGAATCTGATCATAGCA
TTCAATATGAAGCTTCCGAAACCGGAACCCACAAAGACCGTCATTTCCGCCGGGCTAAAGGTTGGTTCAGCTATAACCTG
AAAATAAAAGAAGAAGCAAGCCAGCTTATGATCACCGTACGGCAAGAAGACCGTAACAAAGCAGTGATCCTGCTGAATAA
CGAAAAACTGACCGTTCATCCCACTGTGAGCAAAGCCGACAAAGACGGTTTTATCAGACTCTGTTATCTCCTGCCCCGTA
AATTAAAAGTAGGAAGCTGCGAGATTCTTTTTAAGCCGGACGGAACAGAATGGACCTCTGCCGTTTATGAAGTACGCTTA
CTGAAGTAA

Upstream 100 bases:

>100_bases
CTTCACGGAGACCTTTCTCCCCCTTTCCCTGAATTTAGTATTAACATAAATATCCTCATTCCCTCTCCTTTTTGGAGGGG
GTCAGGGGGAAGCTATTATC

Downstream 100 bases:

>100_bases
CCGTAAGAACAAGAGAATGATCATCGTAAAAATCAAACTTCTATATAATCATTTAAACAAATTCCATTTATGAAAGCAAA
ACTATTAGTCAGCACGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 802; Mature: 802

Protein sequence:

>802_residues
MKTTSFILALIISISIGKAQTNHQVSYFSLQDVKLLSSPFLQAQQTDLHYILALDPDRLSAPFLREAGLTPKAPSYTNWE
NTGLDGHIGGHYLSALSMMYAATGDTAIYHRLNYMLNELHRAQQAVGTGFIGGTPGSLQLWKEIKAGDIRAGGFSLNGKW
VPLYNIHKTYAGLRDAYLYAHSDLARQMLIDLTDWMIDITSGLSDNQMQDMLRSEHGGLNETFADVAEITGDKKYLKLAR
RFSHKVILDPLIKNEDRLNGMHANTQIPKVIGYKRVAEVSKNDKDWNHAAEWDHAARFFWNTVVNHRSVCIGGNSVREHF
HPSDNFTSMLNDVQGPETCNTYNMLRLTKMLYQNSGDVDNSNKPDPRYVDYYERALYNHILSSQEPDKGGFVYFTPMRPG
HYRVYSQPETSMWCCVGSGLENHTKYGEFIYAHQQDTLYVNLFIPSQLNWKEQGVTLTQETLFPDDEKVTLRIDKAAKKN
LTLMIRIPEWAGNSKGYEITINGKKHLSDIQTGASTYLPIRRKWKKGDMITFHLPMKVSLEQIPDKKDYYAFLYGPIVLA
TSTGTENLDGIYADDSRGGHIAHGRQTPLQEIPMLIGNPDSIRHSLHKLSGSKLAFSYDGNVYPTQKSKSLELIPFFRLH
NSRYAVYFRQASEEQFKTIQEEMATAERKATELANRTVDLIFPGEQQPESDHSIQYEASETGTHKDRHFRRAKGWFSYNL
KIKEEASQLMITVRQEDRNKAVILLNNEKLTVHPTVSKADKDGFIRLCYLLPRKLKVGSCEILFKPDGTEWTSAVYEVRL
LK

Sequences:

>Translated_802_residues
MKTTSFILALIISISIGKAQTNHQVSYFSLQDVKLLSSPFLQAQQTDLHYILALDPDRLSAPFLREAGLTPKAPSYTNWE
NTGLDGHIGGHYLSALSMMYAATGDTAIYHRLNYMLNELHRAQQAVGTGFIGGTPGSLQLWKEIKAGDIRAGGFSLNGKW
VPLYNIHKTYAGLRDAYLYAHSDLARQMLIDLTDWMIDITSGLSDNQMQDMLRSEHGGLNETFADVAEITGDKKYLKLAR
RFSHKVILDPLIKNEDRLNGMHANTQIPKVIGYKRVAEVSKNDKDWNHAAEWDHAARFFWNTVVNHRSVCIGGNSVREHF
HPSDNFTSMLNDVQGPETCNTYNMLRLTKMLYQNSGDVDNSNKPDPRYVDYYERALYNHILSSQEPDKGGFVYFTPMRPG
HYRVYSQPETSMWCCVGSGLENHTKYGEFIYAHQQDTLYVNLFIPSQLNWKEQGVTLTQETLFPDDEKVTLRIDKAAKKN
LTLMIRIPEWAGNSKGYEITINGKKHLSDIQTGASTYLPIRRKWKKGDMITFHLPMKVSLEQIPDKKDYYAFLYGPIVLA
TSTGTENLDGIYADDSRGGHIAHGRQTPLQEIPMLIGNPDSIRHSLHKLSGSKLAFSYDGNVYPTQKSKSLELIPFFRLH
NSRYAVYFRQASEEQFKTIQEEMATAERKATELANRTVDLIFPGEQQPESDHSIQYEASETGTHKDRHFRRAKGWFSYNL
KIKEEASQLMITVRQEDRNKAVILLNNEKLTVHPTVSKADKDGFIRLCYLLPRKLKVGSCEILFKPDGTEWTSAVYEVRL
LK
>Mature_802_residues
MKTTSFILALIISISIGKAQTNHQVSYFSLQDVKLLSSPFLQAQQTDLHYILALDPDRLSAPFLREAGLTPKAPSYTNWE
NTGLDGHIGGHYLSALSMMYAATGDTAIYHRLNYMLNELHRAQQAVGTGFIGGTPGSLQLWKEIKAGDIRAGGFSLNGKW
VPLYNIHKTYAGLRDAYLYAHSDLARQMLIDLTDWMIDITSGLSDNQMQDMLRSEHGGLNETFADVAEITGDKKYLKLAR
RFSHKVILDPLIKNEDRLNGMHANTQIPKVIGYKRVAEVSKNDKDWNHAAEWDHAARFFWNTVVNHRSVCIGGNSVREHF
HPSDNFTSMLNDVQGPETCNTYNMLRLTKMLYQNSGDVDNSNKPDPRYVDYYERALYNHILSSQEPDKGGFVYFTPMRPG
HYRVYSQPETSMWCCVGSGLENHTKYGEFIYAHQQDTLYVNLFIPSQLNWKEQGVTLTQETLFPDDEKVTLRIDKAAKKN
LTLMIRIPEWAGNSKGYEITINGKKHLSDIQTGASTYLPIRRKWKKGDMITFHLPMKVSLEQIPDKKDYYAFLYGPIVLA
TSTGTENLDGIYADDSRGGHIAHGRQTPLQEIPMLIGNPDSIRHSLHKLSGSKLAFSYDGNVYPTQKSKSLELIPFFRLH
NSRYAVYFRQASEEQFKTIQEEMATAERKATELANRTVDLIFPGEQQPESDHSIQYEASETGTHKDRHFRRAKGWFSYNL
KIKEEASQLMITVRQEDRNKAVILLNNEKLTVHPTVSKADKDGFIRLCYLLPRKLKVGSCEILFKPDGTEWTSAVYEVRL
LK

Specific function: Unknown

COG id: COG3533

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91340; Mature: 91340

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTSFILALIISISIGKAQTNHQVSYFSLQDVKLLSSPFLQAQQTDLHYILALDPDRLS
CCHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHCCCCCCCCCCEEEEEEECCCCCC
APFLREAGLTPKAPSYTNWENTGLDGHIGGHYLSALSMMYAATGDTAIYHRLNYMLNELH
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RAQQAVGTGFIGGTPGSLQLWKEIKAGDIRAGGFSLNGKWVPLYNIHKTYAGLRDAYLYA
HHHHHHCCCCCCCCCCHHHHHHHHCCCCEEECCEECCCEEEEEEEHHHHHHHHHHHHEEH
HSDLARQMLIDLTDWMIDITSGLSDNQMQDMLRSEHGGLNETFADVAEITGDKKYLKLAR
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHH
RFSHKVILDPLIKNEDRLNGMHANTQIPKVIGYKRVAEVSKNDKDWNHAAEWDHAARFFW
HHCCCEEECHHHCCCHHCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
NTVVNHRSVCIGGNSVREHFHPSDNFTSMLNDVQGPETCNTYNMLRLTKMLYQNSGDVDN
HHHHCCCEEEECCCHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCC
SNKPDPRYVDYYERALYNHILSSQEPDKGGFVYFTPMRPGHYRVYSQPETSMWCCVGSGL
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEECCCCCCEEEEECCCC
ENHTKYGEFIYAHQQDTLYVNLFIPSQLNWKEQGVTLTQETLFPDDEKVTLRIDKAAKKN
CCCCCCCCEEEEECCCEEEEEEEECCCCCCHHCCCEEEHHHCCCCCCEEEEEEECCCCCC
LTLMIRIPEWAGNSKGYEITINGKKHLSDIQTGASTYLPIRRKWKKGDMITFHLPMKVSL
CEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCHHHCCCCCCEEEEEECCEEEH
EQIPDKKDYYAFLYGPIVLATSTGTENLDGIYADDSRGGHIAHGRQTPLQEIPMLIGNPD
HHCCCCCCEEEEEEEEEEEEECCCCCCCCCEEECCCCCCEECCCCCCCHHHCCHHCCCHH
SIRHSLHKLSGSKLAFSYDGNVYPTQKSKSLELIPFFRLHNSRYAVYFRQASEEQFKTIQ
HHHHHHHHCCCCEEEEEECCCEECCCCCCCEEEEEEEEECCCEEEEEEECCCHHHHHHHH
EEMATAERKATELANRTVDLIFPGEQQPESDHSIQYEASETGTHKDRHFRRAKGWFSYNL
HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCEEEEEE
KIKEEASQLMITVRQEDRNKAVILLNNEKLTVHPTVSKADKDGFIRLCYLLPRKLKVGSC
EECCCCCEEEEEEEECCCCCEEEEECCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCE
EILFKPDGTEWTSAVYEVRLLK
EEEECCCCCHHHHEEEEEEECC
>Mature Secondary Structure
MKTTSFILALIISISIGKAQTNHQVSYFSLQDVKLLSSPFLQAQQTDLHYILALDPDRLS
CCHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHCCCCCCCCCCEEEEEEECCCCCC
APFLREAGLTPKAPSYTNWENTGLDGHIGGHYLSALSMMYAATGDTAIYHRLNYMLNELH
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RAQQAVGTGFIGGTPGSLQLWKEIKAGDIRAGGFSLNGKWVPLYNIHKTYAGLRDAYLYA
HHHHHHCCCCCCCCCCHHHHHHHHCCCCEEECCEECCCEEEEEEEHHHHHHHHHHHHEEH
HSDLARQMLIDLTDWMIDITSGLSDNQMQDMLRSEHGGLNETFADVAEITGDKKYLKLAR
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHH
RFSHKVILDPLIKNEDRLNGMHANTQIPKVIGYKRVAEVSKNDKDWNHAAEWDHAARFFW
HHCCCEEECHHHCCCHHCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
NTVVNHRSVCIGGNSVREHFHPSDNFTSMLNDVQGPETCNTYNMLRLTKMLYQNSGDVDN
HHHHCCCEEEECCCHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCC
SNKPDPRYVDYYERALYNHILSSQEPDKGGFVYFTPMRPGHYRVYSQPETSMWCCVGSGL
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEECCCCCCEEEEECCCC
ENHTKYGEFIYAHQQDTLYVNLFIPSQLNWKEQGVTLTQETLFPDDEKVTLRIDKAAKKN
CCCCCCCCEEEEECCCEEEEEEEECCCCCCHHCCCEEEHHHCCCCCCEEEEEEECCCCCC
LTLMIRIPEWAGNSKGYEITINGKKHLSDIQTGASTYLPIRRKWKKGDMITFHLPMKVSL
CEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCHHHCCCCCCEEEEEECCEEEH
EQIPDKKDYYAFLYGPIVLATSTGTENLDGIYADDSRGGHIAHGRQTPLQEIPMLIGNPD
HHCCCCCCEEEEEEEEEEEEECCCCCCCCCEEECCCCCCEECCCCCCCHHHCCHHCCCHH
SIRHSLHKLSGSKLAFSYDGNVYPTQKSKSLELIPFFRLHNSRYAVYFRQASEEQFKTIQ
HHHHHHHHCCCCEEEEEECCCEECCCCCCCEEEEEEEEECCCEEEEEEECCCHHHHHHHH
EEMATAERKATELANRTVDLIFPGEQQPESDHSIQYEASETGTHKDRHFRRAKGWFSYNL
HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCEEEEEE
KIKEEASQLMITVRQEDRNKAVILLNNEKLTVHPTVSKADKDGFIRLCYLLPRKLKVGSC
EECCCCCEEEEEEEECCCCCEEEEECCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCE
EILFKPDGTEWTSAVYEVRLLK
EEEECCCCCHHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA