| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is mgtE [H]
Identifier: 28572397
GI number: 28572397
Start: 261095
End: 262342
Strand: Reverse
Name: mgtE [H]
Synonym: TW237
Alternate gene names: 28572397
Gene position: 262342-261095 (Counterclockwise)
Preceding gene: 28572398
Following gene: 28572396
Centisome position: 28.33
GC content: 46.47
Gene sequence:
>1248_bases ATGAGTAAAAGTGTTTATATCTCAAGGGTCTGTGGCAGTTCGGTCCTCGGGCCAACAGGTGACAGATTGGGAAAGGTCAA AGATGTGTTGGGCACTCCGAGGCTTAGAAAATCCCCTCGAATAATCGGTATGGTCCTTGAAATCGTGGGAAAGCGCTACA TATTTGTTTCGATCAACCGAGTCACCGCAATAGACAACGGATACGTCGCAACTCGTGGGGTAATCAATATTCAGAGGTTC AGGCGTAGATCGGGTGAGATATGCCTTTCCCAAGACATCGTCGGTAAAAAAGTCAGTATTGGAAATAACACAACTGCAAG GGCTGAAGATATAGAGATACTTGCAGACCCGGCAGGCGAATGGTATGTCGGAAAGATATTTGTTAGAACCTCGGGAAATA GGCTATTTTCCAGGGGAAATACCTGCTTTATGCACTGGCAGGATATCTCGGGACTTGATCAAGTACCCGACTATATATCT AACCCAGAAATAAAGGCTGCTGACTTGGCGGCAGATATTGTAGACATGCCTTCAACTGATGCTGCCAGGATTGTTGAAGA TCTTCCGGATGAGCGACTTGCCGACGTTCTGGAAGAGATGGAAGAGCCGGAGCAGGCAAAGATTATAGACGCCCTTGACG ATAATCGCACAGCAGATATTTTGGAAGAGATGCAGCCTGATGATGCTGTGGACCTAATAGGCTATATGTCAAACAAAAGA AAAGAAGGCCTCTTACAACTCATGGAGCCGGAAGAGGCAAGAAAACTTAGGCTTCTTCTCGGTTTTGCGCATAATACAGC AGGCGGCATGATGACCTCTGATTTTGTAATCGTCTCACCGGACACAACGGTTGCCGAAGCCCTAGCCTTGATAAGGCGCC AAGAGATCGCACCAGCCCTTGCATCAACAGTCTGTGTGGCATTACCACCCTATGACCCACCGACCGGGAGGTTCATAGGG GTTGTCCACTTCCAGGCCTTACTGAGACAGCCACCGTATCAGAAACTCTCTCATATAATTGACACGTCTATCGAGCCCGT TCTGCCAACAATTGATGCAGAAAAGGTAAGTAGGATTTTGGCGACCTATAACCTGCTCTCGCTTCCGGTAATCGATGACC GCAAAAGGTTGCTCGGAATAATAACCATTGATGATGTTCTGGACTACGTGTTACCAAAAAATTGGCGTAAAAATGAAATC GACAGTACCAACAATAAAGAGAATATGGTTCACAATGAAAAAGAGTAG
Upstream 100 bases:
>100_bases TCGAAGATAACATACTCATAGCCTCAGATGGCCCTGTAAATATGTCGCGTGATATACCAAGGGCCCGAATTGATGTGGAA CAGTGGATTCAACAAGCATC
Downstream 100 bases:
>100_bases CAAGTTACACACTCCGCTTTTAACATCGCGCATGAGGTTGAGGTATAACCCTGGTGTTTTTGAAATGCGAACCGAGAGGA TTGCGCTCTATATGGGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MSKSVYISRVCGSSVLGPTGDRLGKVKDVLGTPRLRKSPRIIGMVLEIVGKRYIFVSINRVTAIDNGYVATRGVINIQRF RRRSGEICLSQDIVGKKVSIGNNTTARAEDIEILADPAGEWYVGKIFVRTSGNRLFSRGNTCFMHWQDISGLDQVPDYIS NPEIKAADLAADIVDMPSTDAARIVEDLPDERLADVLEEMEEPEQAKIIDALDDNRTADILEEMQPDDAVDLIGYMSNKR KEGLLQLMEPEEARKLRLLLGFAHNTAGGMMTSDFVIVSPDTTVAEALALIRRQEIAPALASTVCVALPPYDPPTGRFIG VVHFQALLRQPPYQKLSHIIDTSIEPVLPTIDAEKVSRILATYNLLSLPVIDDRKRLLGIITIDDVLDYVLPKNWRKNEI DSTNNKENMVHNEKE
Sequences:
>Translated_415_residues MSKSVYISRVCGSSVLGPTGDRLGKVKDVLGTPRLRKSPRIIGMVLEIVGKRYIFVSINRVTAIDNGYVATRGVINIQRF RRRSGEICLSQDIVGKKVSIGNNTTARAEDIEILADPAGEWYVGKIFVRTSGNRLFSRGNTCFMHWQDISGLDQVPDYIS NPEIKAADLAADIVDMPSTDAARIVEDLPDERLADVLEEMEEPEQAKIIDALDDNRTADILEEMQPDDAVDLIGYMSNKR KEGLLQLMEPEEARKLRLLLGFAHNTAGGMMTSDFVIVSPDTTVAEALALIRRQEIAPALASTVCVALPPYDPPTGRFIG VVHFQALLRQPPYQKLSHIIDTSIEPVLPTIDAEKVSRILATYNLLSLPVIDDRKRLLGIITIDDVLDYVLPKNWRKNEI DSTNNKENMVHNEKE >Mature_414_residues SKSVYISRVCGSSVLGPTGDRLGKVKDVLGTPRLRKSPRIIGMVLEIVGKRYIFVSINRVTAIDNGYVATRGVINIQRFR RRSGEICLSQDIVGKKVSIGNNTTARAEDIEILADPAGEWYVGKIFVRTSGNRLFSRGNTCFMHWQDISGLDQVPDYISN PEIKAADLAADIVDMPSTDAARIVEDLPDERLADVLEEMEEPEQAKIIDALDDNRTADILEEMQPDDAVDLIGYMSNKRK EGLLQLMEPEEARKLRLLLGFAHNTAGGMMTSDFVIVSPDTTVAEALALIRRQEIAPALASTVCVALPPYDPPTGRFIGV VHFQALLRQPPYQKLSHIIDTSIEPVLPTIDAEKVSRILATYNLLSLPVIDDRKRLLGIITIDDVLDYVLPKNWRKNEID STNNKENMVHNEKE
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 46177; Mature: 46045
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSVYISRVCGSSVLGPTGDRLGKVKDVLGTPRLRKSPRIIGMVLEIVGKRYIFVSINR CCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEEEEE VTAIDNGYVATRGVINIQRFRRRSGEICLSQDIVGKKVSIGNNTTARAEDIEILADPAGE EEEECCCEEEECCHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCCCCCEEEEECCCCC WYVGKIFVRTSGNRLFSRGNTCFMHWQDISGLDQVPDYISNPEIKAADLAADIVDMPSTD EEEEEEEEEECCCEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCC AARIVEDLPDERLADVLEEMEEPEQAKIIDALDDNRTADILEEMQPDDAVDLIGYMSNKR HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHCCH KEGLLQLMEPEEARKLRLLLGFAHNTAGGMMTSDFVIVSPDTTVAEALALIRRQEIAPAL HHHHHHHCCCHHHHHEEHHEEEHHCCCCCCEECCEEEECCCHHHHHHHHHHHHHHHHHHH ASTVCVALPPYDPPTGRFIGVVHFQALLRQPPYQKLSHIIDTSIEPVLPTIDAEKVSRIL HHCEEEEECCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHH ATYNLLSLPVIDDRKRLLGIITIDDVLDYVLPKNWRKNEIDSTNNKENMVHNEKE HHHHHHCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure SKSVYISRVCGSSVLGPTGDRLGKVKDVLGTPRLRKSPRIIGMVLEIVGKRYIFVSINR CCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEEEEE VTAIDNGYVATRGVINIQRFRRRSGEICLSQDIVGKKVSIGNNTTARAEDIEILADPAGE EEEECCCEEEECCHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCCCCCEEEEECCCCC WYVGKIFVRTSGNRLFSRGNTCFMHWQDISGLDQVPDYISNPEIKAADLAADIVDMPSTD EEEEEEEEEECCCEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCC AARIVEDLPDERLADVLEEMEEPEQAKIIDALDDNRTADILEEMQPDDAVDLIGYMSNKR HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHCCH KEGLLQLMEPEEARKLRLLLGFAHNTAGGMMTSDFVIVSPDTTVAEALALIRRQEIAPAL HHHHHHHCCCHHHHHEEHHEEEHHCCCCCCEECCEEEECCCHHHHHHHHHHHHHHHHHHH ASTVCVALPPYDPPTGRFIGVVHFQALLRQPPYQKLSHIIDTSIEPVLPTIDAEKVSRIL HHCEEEEECCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHH ATYNLLSLPVIDDRKRLLGIITIDDVLDYVLPKNWRKNEIDSTNNKENMVHNEKE HHHHHHCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]