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The map label for this gene is glpQ4 [H]

Identifier: 28379112

GI number: 28379112

Start: 2300909

End: 2302702

Strand: Direct

Name: glpQ4 [H]

Synonym: lp_2582

Alternate gene names: 28379112

Gene position: 2300909-2302702 (Clockwise)

Preceding gene: 28379111

Following gene: 28379115

Centisome position: 69.55

GC content: 43.65

Gene sequence:

>1794_bases
ATGGGCGCTTGGCGTTTTTGGTGGGATAGTACCCGCCGTTTTTATAAGAACTGGGGCAGTTACGTTGCCCTGATATTTAG
TACCAATTTGGTCATTAGTTACCTAGCAATTCCTTTTTTTAATTGGGTGCTAGAAATGTTACTCAAGTGGCAACGGGTCA
GTTATGTCTCGTACACGAATATCGGTAGTATTATTATTCACCAACCACTGGCCGCACTCGGTATGGTGGCGATCTTATTA
GCCATTATTATTTTAGTTTATTGGCAATTTGCCTTTCTGCTACTGGGTATTATGAATATCTTTCGTGGCCGACCACAAAC
TGTGCGCGCGGTCTTGCGGTCAACGGTCACTAGTCTGACTGGCACCTCACCCAGCACTTTCTTATTCTTTATCGGCTACT
TTATTGTGATTTTGCCATTTGGAAGTTTCATCTTTACAACACCATTACTCAACAAGGCCAAAATTCCAGCCTTCATTGTC
AGCTATCTCATGGAAAACCCTTGGATGACGCTCGGCTTGGGGTGCTTCTACTTACTGGCTGGTTACCTTGGAATTCGCCT
AATTAGCCTATTACCGCTAATGATTGTCGATCGGCTTCCATGGAAAACGGCCGTTACTCGTAGTTGGCAACAAACGCGCC
ACCATCTTTGGCGCTACTTATGGACCATGATTGTGACCTTATTTATGATTTTTCTGATTGTCACGACCATTTATACGTTG
ATTTACGTAGCCCAGCTTCAATTCGATAAAACAAGTTTTGCCATGGCCGCTGCCACTGTTAATCTCTTTATCATGGAAGC
AATCACCGAAATTATTATTTGTTATACCACGGCCATCTTCATGATGTTAATTATTGTTTGCTATCGTCAAGACTTTACAC
TCCTCCGCCAACAACCGCAATACTTTAACGAGGCACCACGGTTGCGCAAATTGACCCGGGCGAGTGTTGCAATTGGCTTG
CTGTTAGCGACAAGTTTGCTAGTTGCCGTTAATTTAGTCTACTTAAATGGACTAGTGATTACCAAGCCAATCATGATTTC
CCACCGCGGCGTCGATAACGGTAACGGCGTGCAAAACACAATTCCTGCACTGATCAAGACCAGCAAGGAACATCCGGATT
ACGTTGAGATGGACATCCAAGTCACCAAGGACCATCAATTCGTTGTCATGCATGATCCAACCTTAAAAGCCTTAGCTGGC
GTTAAGAAAAAGCCATCTCAATTAACATTAAAACAACTAGAAAAAATTACTGTTCGTGAAAATGGCTATCAGGCAAAGAT
TCCAAGTTTCGATGCTTACCTGAAAGCGGCTCACAAGCATCATCAAAAACTATTAGTCGAAATCAAGACCAGCTCGGCTT
ACACCGCCGCCGATACTAAACGGTTCATCGATCGTTATGGTGCGACCCTACTGGCTCATCATGACCAAGTCCATACGCTT
AGTTTCAAAGTCATGCGTGATTTGAAACGCTTAGATCAAAAACAATTCGTTAGTTACATCTTGCCTTATAATCTCACGTT
CCCGCATACAGTCGCGAACGGCTACACCATGGAGGTCACCACATTAAACGACCAATTCGTTGACAAGGCTGACCGCAATC
ACAAGACGGTTTACGCCTGGGACATTGATAATACGGACCAAATGGATCAAATGATGTTCATGGGCGTCACCGGCGTAGTC
ACTGATAATCTAACGGAAATGCAGCAAGAAGTTAAGAGCAACACCGACCATCCCAGCTATGCCAAACTCTTATTGACTTT
TATGAATGAATTAAGTCTAACTAGCAACGAGTAA

Upstream 100 bases:

>100_bases
AGCAATTATTTAGATAAAAATAACTAACACAATGCGTGTTACAATAAAATTAATAATGACTTGATTCGTCAATGCCGGAT
CAAGGGAGGAGGCACCACGC

Downstream 100 bases:

>100_bases
TCCACATTATTTCAAAGTTGCTGTCACAGCGAGTGCATAAATCATTCAGCAACCACGAAAATTCTGAATGATGTCGTTGC
TGAAAAAGTGACTTCCAGCT

Product: glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 597; Mature: 596

Protein sequence:

>597_residues
MGAWRFWWDSTRRFYKNWGSYVALIFSTNLVISYLAIPFFNWVLEMLLKWQRVSYVSYTNIGSIIIHQPLAALGMVAILL
AIIILVYWQFAFLLLGIMNIFRGRPQTVRAVLRSTVTSLTGTSPSTFLFFIGYFIVILPFGSFIFTTPLLNKAKIPAFIV
SYLMENPWMTLGLGCFYLLAGYLGIRLISLLPLMIVDRLPWKTAVTRSWQQTRHHLWRYLWTMIVTLFMIFLIVTTIYTL
IYVAQLQFDKTSFAMAAATVNLFIMEAITEIIICYTTAIFMMLIIVCYRQDFTLLRQQPQYFNEAPRLRKLTRASVAIGL
LLATSLLVAVNLVYLNGLVITKPIMISHRGVDNGNGVQNTIPALIKTSKEHPDYVEMDIQVTKDHQFVVMHDPTLKALAG
VKKKPSQLTLKQLEKITVRENGYQAKIPSFDAYLKAAHKHHQKLLVEIKTSSAYTAADTKRFIDRYGATLLAHHDQVHTL
SFKVMRDLKRLDQKQFVSYILPYNLTFPHTVANGYTMEVTTLNDQFVDKADRNHKTVYAWDIDNTDQMDQMMFMGVTGVV
TDNLTEMQQEVKSNTDHPSYAKLLLTFMNELSLTSNE

Sequences:

>Translated_597_residues
MGAWRFWWDSTRRFYKNWGSYVALIFSTNLVISYLAIPFFNWVLEMLLKWQRVSYVSYTNIGSIIIHQPLAALGMVAILL
AIIILVYWQFAFLLLGIMNIFRGRPQTVRAVLRSTVTSLTGTSPSTFLFFIGYFIVILPFGSFIFTTPLLNKAKIPAFIV
SYLMENPWMTLGLGCFYLLAGYLGIRLISLLPLMIVDRLPWKTAVTRSWQQTRHHLWRYLWTMIVTLFMIFLIVTTIYTL
IYVAQLQFDKTSFAMAAATVNLFIMEAITEIIICYTTAIFMMLIIVCYRQDFTLLRQQPQYFNEAPRLRKLTRASVAIGL
LLATSLLVAVNLVYLNGLVITKPIMISHRGVDNGNGVQNTIPALIKTSKEHPDYVEMDIQVTKDHQFVVMHDPTLKALAG
VKKKPSQLTLKQLEKITVRENGYQAKIPSFDAYLKAAHKHHQKLLVEIKTSSAYTAADTKRFIDRYGATLLAHHDQVHTL
SFKVMRDLKRLDQKQFVSYILPYNLTFPHTVANGYTMEVTTLNDQFVDKADRNHKTVYAWDIDNTDQMDQMMFMGVTGVV
TDNLTEMQQEVKSNTDHPSYAKLLLTFMNELSLTSNE
>Mature_596_residues
GAWRFWWDSTRRFYKNWGSYVALIFSTNLVISYLAIPFFNWVLEMLLKWQRVSYVSYTNIGSIIIHQPLAALGMVAILLA
IIILVYWQFAFLLLGIMNIFRGRPQTVRAVLRSTVTSLTGTSPSTFLFFIGYFIVILPFGSFIFTTPLLNKAKIPAFIVS
YLMENPWMTLGLGCFYLLAGYLGIRLISLLPLMIVDRLPWKTAVTRSWQQTRHHLWRYLWTMIVTLFMIFLIVTTIYTLI
YVAQLQFDKTSFAMAAATVNLFIMEAITEIIICYTTAIFMMLIIVCYRQDFTLLRQQPQYFNEAPRLRKLTRASVAIGLL
LATSLLVAVNLVYLNGLVITKPIMISHRGVDNGNGVQNTIPALIKTSKEHPDYVEMDIQVTKDHQFVVMHDPTLKALAGV
KKKPSQLTLKQLEKITVRENGYQAKIPSFDAYLKAAHKHHQKLLVEIKTSSAYTAADTKRFIDRYGATLLAHHDQVHTLS
FKVMRDLKRLDQKQFVSYILPYNLTFPHTVANGYTMEVTTLNDQFVDKADRNHKTVYAWDIDNTDQMDQMMFMGVTGVVT
DNLTEMQQEVKSNTDHPSYAKLLLTFMNELSLTSNE

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to sn-glycerol 3-phosphate (G3P) and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 68610; Mature: 68479

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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ECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GAWRFWWDSTRRFYKNWGSYVALIFSTNLVISYLAIPFFNWVLEMLLKWQRVSYVSYTN
CCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCC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ECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]