| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is cotS [H]
Identifier: 28210034
GI number: 28210034
Start: 247225
End: 248241
Strand: Direct
Name: cotS [H]
Synonym: CTC00271
Alternate gene names: 28210034
Gene position: 247225-248241 (Clockwise)
Preceding gene: 28210033
Following gene: 28210036
Centisome position: 8.83
GC content: 25.76
Gene sequence:
>1017_bases ATGAAAGGAATATATTCTACTAGGAATTACTTGGCACAATATGACTTAGATTCAACATTGTTTGAAAATTTTAAGGTAAA GCCTAAGGAAGTTTTACCTTTAAGAAGTGTTTTTATAATAAGTGATGAAACTGGAGAAAAAATTCTAAAGAAAGTAAATT ATACTGTGGATGAGTTAGAGTTTATAAAAAAGGGATTAAATTATGTAAACAGAAGTTTTAATAGAACCATAAACTTCTTA GAAACAAAAGATAATAAACCATATGTTATTTGGAATGATTCCATATATTGTATGATGAACTTAGTAGAAGGAAGAGAAAG TGATTATAGTAATCCTATGGATTTAATCGTAGCTACAGAAGCTTTGGCAGAATTACATTATGCAGGAAAAGGATTTTATA GCGATATACAATCTAAAAATAATCTAGGAAAGATTATTAAAAATTTCAAAAGAAAAGAAAGGGAAATGGAACTTTTTAGA GAGTTAGCTTTAATTTATAATAATAAGAGTAAATTTAATAATATATTTATAGAGAATGCAGATTATTTAATAGATAAAAT AAAAAAGAGTATAAAAATATTAGAAAACTCATGCTACTATAAATTATGTAGCATGGAGGAAAAAAGAGTGTTTTGTCATC ATGATTTAGCCTATCATAATATTATAATTAATAAGGATAAGGGATATTTTGTAGATTTTGACTATGCTATAGTAGATTTG AGAGTACATGATTTATGTAATTTCATAACTAAATGGGTAAAGAGCTCTGCTTATGATATAGAAAAATGTTCTAAAATATT AGAAGTATATAACAAAATGAACCCTCTAAATGGCAAGGAAATAGAGGTGTTATATGGCATGCTTACTTTCCCACAGGAAA TATTTAGTATAGTAAAAGGTTATTACACTGAAAATAAAAATTGGTCTGAAGAAAGCTCCATAGATAAATTAAAAAAGAAA ATCGATTTAGAAGAATTTAAAGAGGATTTCTTGAAAGATTTTCAAGGCTTTATATGA
Upstream 100 bases:
>100_bases TATAGATATGACAGAAAAAGTTTAAGTGATTATGAGTACTTAGTAATATTGGAAAAATTAATTGAACAAAAAGATTTGAT TTCAATATAGGGGTGGTGGA
Downstream 100 bases:
>100_bases TAAAAGAGGTATCTAAAAGGTAATTTTAAAATTACCTTTTAGATACCTTCTACTTGTTTACTATATTCATTATTTATAAT TTGAGAGTATGCACTTATAG
Product: spore coat protein S
Products: NA
Alternate protein names: Coat protein 40 kDa component 2; COT40-2 [H]
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MKGIYSTRNYLAQYDLDSTLFENFKVKPKEVLPLRSVFIISDETGEKILKKVNYTVDELEFIKKGLNYVNRSFNRTINFL ETKDNKPYVIWNDSIYCMMNLVEGRESDYSNPMDLIVATEALAELHYAGKGFYSDIQSKNNLGKIIKNFKRKEREMELFR ELALIYNNKSKFNNIFIENADYLIDKIKKSIKILENSCYYKLCSMEEKRVFCHHDLAYHNIIINKDKGYFVDFDYAIVDL RVHDLCNFITKWVKSSAYDIEKCSKILEVYNKMNPLNGKEIEVLYGMLTFPQEIFSIVKGYYTENKNWSEESSIDKLKKK IDLEEFKEDFLKDFQGFI
Sequences:
>Translated_338_residues MKGIYSTRNYLAQYDLDSTLFENFKVKPKEVLPLRSVFIISDETGEKILKKVNYTVDELEFIKKGLNYVNRSFNRTINFL ETKDNKPYVIWNDSIYCMMNLVEGRESDYSNPMDLIVATEALAELHYAGKGFYSDIQSKNNLGKIIKNFKRKEREMELFR ELALIYNNKSKFNNIFIENADYLIDKIKKSIKILENSCYYKLCSMEEKRVFCHHDLAYHNIIINKDKGYFVDFDYAIVDL RVHDLCNFITKWVKSSAYDIEKCSKILEVYNKMNPLNGKEIEVLYGMLTFPQEIFSIVKGYYTENKNWSEESSIDKLKKK IDLEEFKEDFLKDFQGFI >Mature_338_residues MKGIYSTRNYLAQYDLDSTLFENFKVKPKEVLPLRSVFIISDETGEKILKKVNYTVDELEFIKKGLNYVNRSFNRTINFL ETKDNKPYVIWNDSIYCMMNLVEGRESDYSNPMDLIVATEALAELHYAGKGFYSDIQSKNNLGKIIKNFKRKEREMELFR ELALIYNNKSKFNNIFIENADYLIDKIKKSIKILENSCYYKLCSMEEKRVFCHHDLAYHNIIINKDKGYFVDFDYAIVDL RVHDLCNFITKWVKSSAYDIEKCSKILEVYNKMNPLNGKEIEVLYGMLTFPQEIFSIVKGYYTENKNWSEESSIDKLKKK IDLEEFKEDFLKDFQGFI
Specific function: Seems to be required for the assembly of the CotSA protein in spores [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Spore wall, spore coat [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CotS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014255 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40061; Mature: 40061
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGIYSTRNYLAQYDLDSTLFENFKVKPKEVLPLRSVFIISDETGEKILKKVNYTVDELE CCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHCCCEEEEEEECCHHHHHHHHHCCCHHHHH FIKKGLNYVNRSFNRTINFLETKDNKPYVIWNDSIYCMMNLVEGRESDYSNPMDLIVATE HHHHHHHHHHHHHHHHEEEEEECCCCCEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHH ALAELHYAGKGFYSDIQSKNNLGKIIKNFKRKEREMELFRELALIYNNKSKFNNIFIENA HHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEECCH DYLIDKIKKSIKILENSCYYKLCSMEEKRVFCHHDLAYHNIIINKDKGYFVDFDYAIVDL HHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHCCHHEEEEEEECCCCEEEEECCEEEHH RVHDLCNFITKWVKSSAYDIEKCSKILEVYNKMNPLNGKEIEVLYGMLTFPQEIFSIVKG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH YYTENKNWSEESSIDKLKKKIDLEEFKEDFLKDFQGFI HHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKGIYSTRNYLAQYDLDSTLFENFKVKPKEVLPLRSVFIISDETGEKILKKVNYTVDELE CCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHCCCEEEEEEECCHHHHHHHHHCCCHHHHH FIKKGLNYVNRSFNRTINFLETKDNKPYVIWNDSIYCMMNLVEGRESDYSNPMDLIVATE HHHHHHHHHHHHHHHHEEEEEECCCCCEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHH ALAELHYAGKGFYSDIQSKNNLGKIIKNFKRKEREMELFRELALIYNNKSKFNNIFIENA HHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEECCH DYLIDKIKKSIKILENSCYYKLCSMEEKRVFCHHDLAYHNIIINKDKGYFVDFDYAIVDL HHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHCCHHEEEEEEECCCCEEEEECCEEEHH RVHDLCNFITKWVKSSAYDIEKCSKILEVYNKMNPLNGKEIEVLYGMLTFPQEIFSIVKG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH YYTENKNWSEESSIDKLKKKIDLEEFKEDFLKDFQGFI HHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7545510; 9387221; 9384377; 8289687 [H]