| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is glcK [H]
Identifier: 28209997
GI number: 28209997
Start: 197483
End: 198436
Strand: Direct
Name: glcK [H]
Synonym: CTC00230
Alternate gene names: 28209997
Gene position: 197483-198436 (Clockwise)
Preceding gene: 161486852
Following gene: 28209998
Centisome position: 7.05
GC content: 30.19
Gene sequence:
>954_bases GTGAATAAAAAGTATGTAGTAGGAATAGACTTAGGTGGTACAACTATAAGCGGAGGAGTATTAGATTATGAAGGAAATAT AGTTTTTAGACATACTATAGATACTAAGTCTGAACTTGGAGAGAAAATTGTACTAGAAAGAATCATAAAAGTTATAGATT ATGTAATAAAAAAATCAAAGATTCCTAAGAATAATATAAAAGCAATAGGAATTGGATCACCAGGACCTTTAGATATAGAA AAAGGAATTATTATAACTAGTCCCAATTTACCATTTAAAAATTTTAATATAGTTAATCCAATAAAAAATCATTTTAAAAT CTCTGTTTATTTAGATAATGATGCCAATGCGGCAGCAGTAGGAGAGTATAAATTTGGATCTGGAAAAGGAAGCAGAAACA TGATATTTATAACTGTTTCTACAGGAATAGGTGGAGGAGCAATATTAAATGGGAACATATATAGAGGTAGTAGTTCCAAT GCTTTAGAAATAGGGCATATGACTTTAAAAGAAGATGGAGCCATATGTAATTGTGGAAATTTTGGATGTGCAGAAGCATT GGCATCGGGCACAGCTATAGCTAAAAAAGCAAGAATGGAATTGAATAGAGGAAAAGAAAGCTCATTGAAAAAACTAAAGA AGATTTCAGCATATAATGTTTTTCAAGAAGCTAAAAATGGAGATAAATTAGCACAAGAAATTGTAGACGAGGCTTTGGAG TATTTAGGTATATGTGTTTCAAACATAATTATAACCTTTGATCCAGATACTATAGTTATAGGTGGAGGGGTATCAAAAGC TGGAGATATAATATTTAATAAAATAAACCAAGTTGTAAAAGAAAGGTGCTTTGAAGCTATGTGGAAAAATACTAAAATAA TAAAAGCTTTGTTATTAGAGGATGCAGGTATTATTGGGGCAGCTTCATTAGCTATATTTGAAGAAAGTAAATAA
Upstream 100 bases:
>100_bases TAGCATTAAAATATACAATTTATTTTAAATATGTTTGAATTATTGACAAAAAATTAGTGAATGATAGTATTTAATTATAA TATGTTTAGGAGGGGGTCTA
Downstream 100 bases:
>100_bases ATTTATATAATAATTTTACAAATTCTTTTAAGAATTTTCTTAACATTTGGGATATTTCATGATATTATATTAATATAGAC AAAACATAAAATATTTTAGA
Product: transcriptional repressor
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MNKKYVVGIDLGGTTISGGVLDYEGNIVFRHTIDTKSELGEKIVLERIIKVIDYVIKKSKIPKNNIKAIGIGSPGPLDIE KGIIITSPNLPFKNFNIVNPIKNHFKISVYLDNDANAAAVGEYKFGSGKGSRNMIFITVSTGIGGGAILNGNIYRGSSSN ALEIGHMTLKEDGAICNCGNFGCAEALASGTAIAKKARMELNRGKESSLKKLKKISAYNVFQEAKNGDKLAQEIVDEALE YLGICVSNIIITFDPDTIVIGGGVSKAGDIIFNKINQVVKERCFEAMWKNTKIIKALLLEDAGIIGAASLAIFEESK
Sequences:
>Translated_317_residues MNKKYVVGIDLGGTTISGGVLDYEGNIVFRHTIDTKSELGEKIVLERIIKVIDYVIKKSKIPKNNIKAIGIGSPGPLDIE KGIIITSPNLPFKNFNIVNPIKNHFKISVYLDNDANAAAVGEYKFGSGKGSRNMIFITVSTGIGGGAILNGNIYRGSSSN ALEIGHMTLKEDGAICNCGNFGCAEALASGTAIAKKARMELNRGKESSLKKLKKISAYNVFQEAKNGDKLAQEIVDEALE YLGICVSNIIITFDPDTIVIGGGVSKAGDIIFNKINQVVKERCFEAMWKNTKIIKALLLEDAGIIGAASLAIFEESK >Mature_317_residues MNKKYVVGIDLGGTTISGGVLDYEGNIVFRHTIDTKSELGEKIVLERIIKVIDYVIKKSKIPKNNIKAIGIGSPGPLDIE KGIIITSPNLPFKNFNIVNPIKNHFKISVYLDNDANAAAVGEYKFGSGKGSRNMIFITVSTGIGGGAILNGNIYRGSSSN ALEIGHMTLKEDGAICNCGNFGCAEALASGTAIAKKARMELNRGKESSLKKLKKISAYNVFQEAKNGDKLAQEIVDEALE YLGICVSNIIITFDPDTIVIGGGVSKAGDIIFNKINQVVKERCFEAMWKNTKIIKALLLEDAGIIGAASLAIFEESK
Specific function: May Be A Regulator In Specific Sugar Metabolism. May Influence The Rate Of Glucose Uptake Or Glycolysis In Cells In The Rich Medium. [C]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI298566325, Length=265, Percent_Identity=32.4528301886792, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI298566315, Length=265, Percent_Identity=32.4528301886792, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI4885285, Length=265, Percent_Identity=32.4528301886792, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI190014632, Length=265, Percent_Identity=32.4528301886792, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI298566312, Length=114, Percent_Identity=35.9649122807018, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1787878, Length=271, Percent_Identity=28.7822878228782, Blast_Score=135, Evalue=2e-33, Organism=Escherichia coli, GI1786891, Length=309, Percent_Identity=26.537216828479, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI87081733, Length=313, Percent_Identity=25.5591054313099, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87082127, Length=229, Percent_Identity=25.3275109170306, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1787363, Length=316, Percent_Identity=26.2658227848101, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI87082230, Length=263, Percent_Identity=28.1368821292776, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790522, Length=272, Percent_Identity=24.6323529411765, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 34047; Mature: 34047
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKYVVGIDLGGTTISGGVLDYEGNIVFRHTIDTKSELGEKIVLERIIKVIDYVIKKSK CCCCEEEEEECCCCEEECCEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC IPKNNIKAIGIGSPGPLDIEKGIIITSPNLPFKNFNIVNPIKNHFKISVYLDNDANAAAV CCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCEEEEEEECCCCCEEEE GEYKFGSGKGSRNMIFITVSTGIGGGAILNGNIYRGSSSNALEIGHMTLKEDGAICNCGN ECEECCCCCCCCEEEEEEEECCCCCCEEEECEEEECCCCCEEEEEEEEEECCCCEEECCC FGCAEALASGTAIAKKARMELNRGKESSLKKLKKISAYNVFQEAKNGDKLAQEIVDEALE CCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH YLGICVSNIIITFDPDTIVIGGGVSKAGDIIFNKINQVVKERCFEAMWKNTKIIKALLLE HHHHHHHCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH DAGIIGAASLAIFEESK CCCCEEEEEEEEEECCC >Mature Secondary Structure MNKKYVVGIDLGGTTISGGVLDYEGNIVFRHTIDTKSELGEKIVLERIIKVIDYVIKKSK CCCCEEEEEECCCCEEECCEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC IPKNNIKAIGIGSPGPLDIEKGIIITSPNLPFKNFNIVNPIKNHFKISVYLDNDANAAAV CCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCEEEEEEECCCCCEEEE GEYKFGSGKGSRNMIFITVSTGIGGGAILNGNIYRGSSSNALEIGHMTLKEDGAICNCGN ECEECCCCCCCCEEEEEEEECCCCCCEEEECEEEECCCCCEEEEEEEEEECCCCEEECCC FGCAEALASGTAIAKKARMELNRGKESSLKKLKKISAYNVFQEAKNGDKLAQEIVDEALE CCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH YLGICVSNIIITFDPDTIVIGGGVSKAGDIIFNKINQVVKERCFEAMWKNTKIIKALLLE HHHHHHHCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH DAGIIGAASLAIFEESK CCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]