| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is ydiE [C]
Identifier: 238919806
GI number: 238919806
Start: 1839711
End: 1839941
Strand: Reverse
Name: ydiE [C]
Synonym: NT01EI_1910
Alternate gene names: 238919806
Gene position: 1839941-1839711 (Counterclockwise)
Preceding gene: 238919807
Following gene: 238919805
Centisome position: 48.26
GC content: 51.95
Gene sequence:
>231_bases ATGATTATCATTAAGATGAAGAGCGGAATTTTATCCTGCGTAATGACTATGGAAAAAGCGACTCCCGATTCACCACGTAC CAAGCTGACGCAAGAACGTACTTCAGCGCCGGGCAGTACCATCGCCAGTCACACCCTGCTCGGCCAGGCAGGCCGGGTCA CCATTACCCATAAGGGAGAGTACTACCAGCTACGTCAGACCCGGGCGGGTAAACTTATCCTGACCAAATAG
Upstream 100 bases:
>100_bases CTCTGGGGGCAGATCCACACGCTGATAGACCGCCATCTGACGCTGCCAGAATACCCCATATGTTAAAAACTGCTTGCCGT CATCGGCAGCTTATACGATA
Downstream 100 bases:
>100_bases ATCCCATAACACCCTGATATTGTTTCGCCAGCCACCCAGTCCTCCGCATACCCGCGGTGTGGCAAGGCAGCCAGCAGTCC CAATGCCATATTACATTTGG
Product: hemin uptake protein HemP
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MIIIKMKSGILSCVMTMEKATPDSPRTKLTQERTSAPGSTIASHTLLGQAGRVTITHKGEYYQLRQTRAGKLILTK
Sequences:
>Translated_76_residues MIIIKMKSGILSCVMTMEKATPDSPRTKLTQERTSAPGSTIASHTLLGQAGRVTITHKGEYYQLRQTRAGKLILTK >Mature_76_residues MIIIKMKSGILSCVMTMEKATPDSPRTKLTQERTSAPGSTIASHTLLGQAGRVTITHKGEYYQLRQTRAGKLILTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8346; Mature: 8346
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIIKMKSGILSCVMTMEKATPDSPRTKLTQERTSAPGSTIASHTLLGQAGRVTITHKGE CEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHCCCCCCEEEEEECCC YYQLRQTRAGKLILTK EEEEECCCCCEEEEEC >Mature Secondary Structure MIIIKMKSGILSCVMTMEKATPDSPRTKLTQERTSAPGSTIASHTLLGQAGRVTITHKGE CEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHCCCCCCEEEEEECCC YYQLRQTRAGKLILTK EEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA