| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is phoR [H]
Identifier: 238919114
GI number: 238919114
Start: 1178135
End: 1179046
Strand: Direct
Name: phoR [H]
Synonym: NT01EI_1185
Alternate gene names: 238919114
Gene position: 1178135-1179046 (Clockwise)
Preceding gene: 238919113
Following gene: 238919115
Centisome position: 30.9
GC content: 61.4
Gene sequence:
>912_bases GTGTTGGATAAACTCTCCTGGAAGACGCTGCTGTCTGAGCTGCTGTTGTGCTGCGTGCCGGCGCTGCTGCTCGGCACGCT GTTCGGCTATTTACCCTGGTTCTTACTGTCGGCGCTGTGCCTGCTGCTGATGTGGCACGGCTGGAATCAGCTGCGGCTCT CCCACTGGCTGTGGGTGGATCGCAGCATGACGCCGCCCAGCGGACGCGGCAGCTGGGAGCCGCTGTTTTACGGGTTGTAT CAGATGCAGCAGCGTAATCGGCGGCGACGGCGTGAGCTGGCCTTGCTGATCAAACGGTTCCGCAGTGGGGCAGAGTCGCT GCCCGATGCCATTGTGATGCTGACCGATGAGGGCAATATCTTTTGGTGCAACCGTCTGGCGCAGCACCTGCTGGGGTTTC GCTGGCCCGAGGACAATGGACAGAATATCCGTAATCTGCTGCGTTATCCCGAATTTAGCCGCTATCTGGGCGACGCCGAT TATACCCGGCCGCTGACACTGCACCTTAACAGCGGGCGCCATATGGAGTTTCGCCTGATGCCCTACAGCGAGGGGCAGAT GCTGATGGTCGCGTGCGATGTGACCCAAAAGCGCCAGCTTGAGGGCGCGCGGCGCAACTTTTTTGCCAACGTCAGCCATG AGCTGCGTACGCCGCTGACGGTACTGCAGGGCTATCTGGAGATGTTTGGCGACGATGCGATGCCGGCGCCGCAGCGGGAG AAGGCGCTGTTGACCATGCAGGCACAGGCGCAGCGTATGGATGGACTGGTCCGGCAGCTGCTGGTGCTGTCGCGGATTGA GGCGGCGCCAGACATCGATCTCGGCGCGGTGGTTGATGTCCCGGCGATGCTGCATATGCTGGATCGGGAGGCCAACGCGT TGAGCGATGGTCAGCACAGGCTGCGTTTTTAG
Upstream 100 bases:
>100_bases AGGCGCTGGAGGGCAGCGGTCACGATCGCATGGTGCAGACCGTGCGTGGTACCGGCTACCGTTTCTCCGCCCGCTACTGA TCGGCGATGGAGTGCTGACT
Downstream 100 bases:
>100_bases CATTGATGACACCCTGCGGGTGCGCGGCAATGAGGAGCAGCTGCGCAGCGCTGTCTCCAATCTGGTGTATAACGCGATCA ACCACACACCGGCGGGAACG
Product: phosphate regulon sensor protein PhoR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MLDKLSWKTLLSELLLCCVPALLLGTLFGYLPWFLLSALCLLLMWHGWNQLRLSHWLWVDRSMTPPSGRGSWEPLFYGLY QMQQRNRRRRRELALLIKRFRSGAESLPDAIVMLTDEGNIFWCNRLAQHLLGFRWPEDNGQNIRNLLRYPEFSRYLGDAD YTRPLTLHLNSGRHMEFRLMPYSEGQMLMVACDVTQKRQLEGARRNFFANVSHELRTPLTVLQGYLEMFGDDAMPAPQRE KALLTMQAQAQRMDGLVRQLLVLSRIEAAPDIDLGAVVDVPAMLHMLDREANALSDGQHRLRF
Sequences:
>Translated_303_residues MLDKLSWKTLLSELLLCCVPALLLGTLFGYLPWFLLSALCLLLMWHGWNQLRLSHWLWVDRSMTPPSGRGSWEPLFYGLY QMQQRNRRRRRELALLIKRFRSGAESLPDAIVMLTDEGNIFWCNRLAQHLLGFRWPEDNGQNIRNLLRYPEFSRYLGDAD YTRPLTLHLNSGRHMEFRLMPYSEGQMLMVACDVTQKRQLEGARRNFFANVSHELRTPLTVLQGYLEMFGDDAMPAPQRE KALLTMQAQAQRMDGLVRQLLVLSRIEAAPDIDLGAVVDVPAMLHMLDREANALSDGQHRLRF >Mature_303_residues MLDKLSWKTLLSELLLCCVPALLLGTLFGYLPWFLLSALCLLLMWHGWNQLRLSHWLWVDRSMTPPSGRGSWEPLFYGLY QMQQRNRRRRRELALLIKRFRSGAESLPDAIVMLTDEGNIFWCNRLAQHLLGFRWPEDNGQNIRNLLRYPEFSRYLGDAD YTRPLTLHLNSGRHMEFRLMPYSEGQMLMVACDVTQKRQLEGARRNFFANVSHELRTPLTVLQGYLEMFGDDAMPAPQRE KALLTMQAQAQRMDGLVRQLLVLSRIEAAPDIDLGAVVDVPAMLHMLDREANALSDGQHRLRF
Specific function: Member of the two-component regulatory system phoR/phoB involved in the phosphate regulon genes expression. PhoR may function as a membrane-associated protein kinase that phosphorylates phoB in response to environmental signals [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=303, Percent_Identity=68.6468646864686, Blast_Score=415, Evalue=1e-117,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR021766 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR014310 [H]
Pfam domain/function: PF11808 DUF3329; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 35200; Mature: 35200
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: PS50112 PAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDKLSWKTLLSELLLCCVPALLLGTLFGYLPWFLLSALCLLLMWHGWNQLRLSHWLWVD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEC RSMTPPSGRGSWEPLFYGLYQMQQRNRRRRRELALLIKRFRSGAESLPDAIVMLTDEGNI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCE FWCNRLAQHLLGFRWPEDNGQNIRNLLRYPEFSRYLGDADYTRPLTLHLNSGRHMEFRLM EEHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCEEEEECCCCEEEEEEE PYSEGQMLMVACDVTQKRQLEGARRNFFANVSHELRTPLTVLQGYLEMFGDDAMPAPQRE ECCCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHCCCCCCCCCHH KALLTMQAQAQRMDGLVRQLLVLSRIEAAPDIDLGAVVDVPAMLHMLDREANALSDGQHR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH LRF CCC >Mature Secondary Structure MLDKLSWKTLLSELLLCCVPALLLGTLFGYLPWFLLSALCLLLMWHGWNQLRLSHWLWVD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEC RSMTPPSGRGSWEPLFYGLYQMQQRNRRRRRELALLIKRFRSGAESLPDAIVMLTDEGNI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCE FWCNRLAQHLLGFRWPEDNGQNIRNLLRYPEFSRYLGDADYTRPLTLHLNSGRHMEFRLM EEHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCEEEEECCCCEEEEEEE PYSEGQMLMVACDVTQKRQLEGARRNFFANVSHELRTPLTVLQGYLEMFGDDAMPAPQRE ECCCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHCCCCCCCCCHH KALLTMQAQAQRMDGLVRQLLVLSRIEAAPDIDLGAVVDVPAMLHMLDREANALSDGQHR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH LRF CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2556368 [H]