Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028102

Identifier: 238028102

GI number: 238028102

Start: 2910970

End: 2911521

Strand: Reverse

Name: 238028102

Synonym: bglu_1g25530

Alternate gene names: NA

Gene position: 2911521-2910970 (Counterclockwise)

Preceding gene: 238028103

Following gene: 238028101

Centisome position: 74.53

GC content: 61.59

Gene sequence:

>552_bases
ATGTTCGCTTCATCCTTCACCCGTAGCGGGATTGCCGTGGCGGCGGCGCTTGTCGCGATGTCGGCATCGGCGGCGGAGTA
TCCGATCGGCAAGCAGCAGATCCAGGGTGGCATGGAAGTCGGCGTCGTGTATCTGCAGCCGATCACGATGGAACCGGAAG
GCATGATGCGCAAGGCATCGGATTCCGACATTCATCTCGAGACCGACATTCATGCGGTGAAGAACAACCCGACGGGCTTC
GCCGAGGGCGACTGGATGCCGTATCTGCAGGTCGAGTACAAGCTGACCAAGCAGGGTGACGCGAAGTGGAAGGCGGAAGG
CAACCTGATGGGCATGGTCGCGAACGACGGCCCGCACTATGGCGACAACGTCAAGCTCGACGGCCCGGGCAAGTACCATC
TGTCGATGACGGTGAAGCCGCCGATGCAGACGGGCCACCTGGCCTTCGGCCGCCACGTCGACAAGGAAACGGGCGTGGGC
CCGTGGTTCAAGCCGTTTACGCTCGAATACGATTTCCCGTTCGCGGGTATCGGCAAGAAGGGCGGTTACTGA

Upstream 100 bases:

>100_bases
TTAACTTTCGTAGTTACCCGCATCGCCAATTGCGTCACGAGCGTTCGTGAGCATTCGCGAGGTGTTTCAGTTCACCAGAC
GATAAAAACAAGGAGTTTCA

Downstream 100 bases:

>100_bases
TCGCGCTGCGTATCGCGCGTCGCCGTCCGGCACGGCCTGGCGGCGTCGCACGGTGCCGCCCTCAACGAGAAACATAATGA
GATTCCCCAGGATTTTCGCC

Product: high-affinity Fe2 transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MFASSFTRSGIAVAAALVAMSASAAEYPIGKQQIQGGMEVGVVYLQPITMEPEGMMRKASDSDIHLETDIHAVKNNPTGF
AEGDWMPYLQVEYKLTKQGDAKWKAEGNLMGMVANDGPHYGDNVKLDGPGKYHLSMTVKPPMQTGHLAFGRHVDKETGVG
PWFKPFTLEYDFPFAGIGKKGGY

Sequences:

>Translated_183_residues
MFASSFTRSGIAVAAALVAMSASAAEYPIGKQQIQGGMEVGVVYLQPITMEPEGMMRKASDSDIHLETDIHAVKNNPTGF
AEGDWMPYLQVEYKLTKQGDAKWKAEGNLMGMVANDGPHYGDNVKLDGPGKYHLSMTVKPPMQTGHLAFGRHVDKETGVG
PWFKPFTLEYDFPFAGIGKKGGY
>Mature_183_residues
MFASSFTRSGIAVAAALVAMSASAAEYPIGKQQIQGGMEVGVVYLQPITMEPEGMMRKASDSDIHLETDIHAVKNNPTGF
AEGDWMPYLQVEYKLTKQGDAKWKAEGNLMGMVANDGPHYGDNVKLDGPGKYHLSMTVKPPMQTGHLAFGRHVDKETGVG
PWFKPFTLEYDFPFAGIGKKGGY

Specific function: Unknown

COG id: COG3470

COG function: function code P; Uncharacterized protein probably involved in high-affinity Fe2+ transport

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0423 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018470 [H]

Pfam domain/function: PF10634 Iron_transport [H]

EC number: NA

Molecular weight: Translated: 19904; Mature: 19904

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFASSFTRSGIAVAAALVAMSASAAEYPIGKQQIQGGMEVGVVYLQPITMEPEGMMRKAS
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEEEEEEEECCHHHHCCCC
DSDIHLETDIHAVKNNPTGFAEGDWMPYLQVEYKLTKQGDAKWKAEGNLMGMVANDGPHY
CCCEEEEECEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCEEEEEECCCCCC
GDNVKLDGPGKYHLSMTVKPPMQTGHLAFGRHVDKETGVGPWFKPFTLEYDFPFAGIGKK
CCCEEECCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
GGY
CCC
>Mature Secondary Structure
MFASSFTRSGIAVAAALVAMSASAAEYPIGKQQIQGGMEVGVVYLQPITMEPEGMMRKAS
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEEEEEEEECCHHHHCCCC
DSDIHLETDIHAVKNNPTGFAEGDWMPYLQVEYKLTKQGDAKWKAEGNLMGMVANDGPHY
CCCEEEEECEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCEEEEEECCCCCC
GDNVKLDGPGKYHLSMTVKPPMQTGHLAFGRHVDKETGVGPWFKPFTLEYDFPFAGIGKK
CCCEEECCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
GGY
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]