Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238025492

Identifier: 238025492

GI number: 238025492

Start: 2713174

End: 2714652

Strand: Direct

Name: 238025492

Synonym: bglu_2g21870

Alternate gene names: NA

Gene position: 2713174-2714652 (Clockwise)

Preceding gene: 238025491

Following gene: 238025493

Centisome position: 95.96

GC content: 62.14

Gene sequence:

>1479_bases
ATGCTTACGAACTTGCTTTCATTGAACTTTCAGGTGCCCTTTGTGGCCCACAAATTCGATGCGTCGAAGGCGATTCGCGG
CCTGCGCGGTATGCCGCGCAGCGTGCTGCTGATCGGCCAGGCGAACCCGCCGATCGGCGTCGACATTAAGAAGCGCCAAC
GCGTCACCAGCGAGGCCGAAGCGATCGGCCTGCTGGGTGAAGGCTCGATGCTGCTCGCAATGTGGCGTGCGGCAAAGGCA
AACGCCGATCTTGGCATGCCGATCGATCTGGCGATCCTTGCTGACGATGCGACCGCACTGGCTGCCACGGGCAAGGTGAC
GCTGCAGGTCGATGCGAATCACGCGTCCGGCGAAGTGTCGCTGTACATCGGCGGCAAACGCGTGCGGATCGGGATCGCGG
TCAACGACACTGCGACGACTGCAGCCACGAAGCTCCTCAACGCAATCCAGGCGACACCGAGTCTTCCCGTTACTGCTGTC
GCGGGCACCGCAGCCGGAGAAGTGAAGCTGACCTGCCGCTGGAAAGGCGCGACGGGCAACAGCATCGATCTGCGCAGCAC
GTACTACGCGGATGATCGGCTGCCGCAGGGCGTGACGGTGACGATCACGTCGATGGCTGGCGGTGCCGTCAATCCCGACA
TCACGCCGGTCATCTCGGCGATCAAAGGCTTTCGTGCGACCGAATACGCGATGCCGTACACCGACAGCGCGAACATGGGT
GTGCTGGAGGCCGAGCTGGAACGGCGTTGGAACTTCGACAACATGCAGGATGGCCAGGCCGTGACGGTCATGCGCGGAAG
CGAGGGGGAAGTTGTCGCCTGGCTCGGCCCCCGCAACAGTCCGGCGGTGCACACGATCTGCGTGACCCGTGACCTTACCA
ATCCGTGGGAGACAGCCGCAATGGCCGCCGCCGCGATCGAGAGCCACGTGGCGATCGACCCGGCAGTCCCGTTCACGGGT
GTGGCGCTGAGCGGCTATGTCGCAGCGCGCCTGGAAGACGACTGGGAAATCGACCAGCGCAACAACATGCTGACGGCGGG
CGGCTCAGTGCTCGAGACGATGGAGGACGGCACCGCGCACATGCTGCGCGTGGTGACGAACTACACGACGCATCCGACCG
GTGCCATAGACCCGTCGTGGCGAAACCTGAACTGGGTGAAAACGCTGTCGTATTACCGCTGGTTCACGGTGACGGAAATC
CAGACCAAGTATCGCGGCTACAAGCTGGCCGAGTACGTCACCGAGCCGATTCCAGGCCAGAAGATCATGACCGTCCCGCT
TGGCACCGACATCATGCTGAACAACTACGAGCAGTTTATGACGGCCGGCCTGTTCCAGAACATGGACCATTACAAGAAGA
CGTTGCGAGTCGAAGTCGACGGGCCGAACGGCAAGCTGAAGATCCTCGACCAGCCGGTGCTCATCACGCAGCACTACCAA
ACCGAGATCACCAGCGAGTTCATCGCAGGTCACGTTTGA

Upstream 100 bases:

>100_bases
TTCTCCGGCTGCTCGAAGACGGCGATCTGATCCGCCAACGTCCCGAGTAACGGAAGGTCGCTTAAACCCGCTTCAAACCT
CATTCACAGGGCAATAGAAG

Downstream 100 bases:

>100_bases
TCGGCCCCGAAACACACACATTTCTCTGACTTTAATGGAGGGCTTAAATGGCCTGCGATAGCGAAATTTTCCGTGTGGAC
AGCCTCACCGTGGACGGTGA

Product: bacteriophage Mu tail sheath protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MLTNLLSLNFQVPFVAHKFDASKAIRGLRGMPRSVLLIGQANPPIGVDIKKRQRVTSEAEAIGLLGEGSMLLAMWRAAKA
NADLGMPIDLAILADDATALAATGKVTLQVDANHASGEVSLYIGGKRVRIGIAVNDTATTAATKLLNAIQATPSLPVTAV
AGTAAGEVKLTCRWKGATGNSIDLRSTYYADDRLPQGVTVTITSMAGGAVNPDITPVISAIKGFRATEYAMPYTDSANMG
VLEAELERRWNFDNMQDGQAVTVMRGSEGEVVAWLGPRNSPAVHTICVTRDLTNPWETAAMAAAAIESHVAIDPAVPFTG
VALSGYVAARLEDDWEIDQRNNMLTAGGSVLETMEDGTAHMLRVVTNYTTHPTGAIDPSWRNLNWVKTLSYYRWFTVTEI
QTKYRGYKLAEYVTEPIPGQKIMTVPLGTDIMLNNYEQFMTAGLFQNMDHYKKTLRVEVDGPNGKLKILDQPVLITQHYQ
TEITSEFIAGHV

Sequences:

>Translated_492_residues
MLTNLLSLNFQVPFVAHKFDASKAIRGLRGMPRSVLLIGQANPPIGVDIKKRQRVTSEAEAIGLLGEGSMLLAMWRAAKA
NADLGMPIDLAILADDATALAATGKVTLQVDANHASGEVSLYIGGKRVRIGIAVNDTATTAATKLLNAIQATPSLPVTAV
AGTAAGEVKLTCRWKGATGNSIDLRSTYYADDRLPQGVTVTITSMAGGAVNPDITPVISAIKGFRATEYAMPYTDSANMG
VLEAELERRWNFDNMQDGQAVTVMRGSEGEVVAWLGPRNSPAVHTICVTRDLTNPWETAAMAAAAIESHVAIDPAVPFTG
VALSGYVAARLEDDWEIDQRNNMLTAGGSVLETMEDGTAHMLRVVTNYTTHPTGAIDPSWRNLNWVKTLSYYRWFTVTEI
QTKYRGYKLAEYVTEPIPGQKIMTVPLGTDIMLNNYEQFMTAGLFQNMDHYKKTLRVEVDGPNGKLKILDQPVLITQHYQ
TEITSEFIAGHV
>Mature_492_residues
MLTNLLSLNFQVPFVAHKFDASKAIRGLRGMPRSVLLIGQANPPIGVDIKKRQRVTSEAEAIGLLGEGSMLLAMWRAAKA
NADLGMPIDLAILADDATALAATGKVTLQVDANHASGEVSLYIGGKRVRIGIAVNDTATTAATKLLNAIQATPSLPVTAV
AGTAAGEVKLTCRWKGATGNSIDLRSTYYADDRLPQGVTVTITSMAGGAVNPDITPVISAIKGFRATEYAMPYTDSANMG
VLEAELERRWNFDNMQDGQAVTVMRGSEGEVVAWLGPRNSPAVHTICVTRDLTNPWETAAMAAAAIESHVAIDPAVPFTG
VALSGYVAARLEDDWEIDQRNNMLTAGGSVLETMEDGTAHMLRVVTNYTTHPTGAIDPSWRNLNWVKTLSYYRWFTVTEI
QTKYRGYKLAEYVTEPIPGQKIMTVPLGTDIMLNNYEQFMTAGLFQNMDHYKKTLRVEVDGPNGKLKILDQPVLITQHYQ
TEITSEFIAGHV

Specific function: Major component of the tail [H]

COG id: COG4386

COG function: function code R; Mu-like prophage tail sheath protein gpL

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein L [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007067 [H]

Pfam domain/function: PF04984 Phage_sheath_1 [H]

EC number: NA

Molecular weight: Translated: 53327; Mature: 53327

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS00889 CNMP_BINDING_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTNLLSLNFQVPFVAHKFDASKAIRGLRGMPRSVLLIGQANPPIGVDIKKRQRVTSEAE
CCCCEEEEEEECCEEEEECCHHHHHHHHCCCCCEEEEEECCCCCCCCEEHHHHHHHCHHH
AIGLLGEGSMLLAMWRAAKANADLGMPIDLAILADDATALAATGKVTLQVDANHASGEVS
HEEEECCCCCEEEEHHHHCCCCCCCCCEEEEEEECCCEEEEECCEEEEEEECCCCCCEEE
LYIGGKRVRIGIAVNDTATTAATKLLNAIQATPSLPVTAVAGTAAGEVKLTCRWKGATGN
EEECCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEECCCCCC
SIDLRSTYYADDRLPQGVTVTITSMAGGAVNPDITPVISAIKGFRATEYAMPYTDSANMG
EEEECEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCC
VLEAELERRWNFDNMQDGQAVTVMRGSEGEVVAWLGPRNSPAVHTICVTRDLTNPWETAA
EEEHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCHHHHH
MAAAAIESHVAIDPAVPFTGVALSGYVAARLEDDWEIDQRNNMLTAGGSVLETMEDGTAH
HHHHHHHHCEEECCCCCCCCEEECCEEEEEECCCCCCCCCCCEEECCCHHHHHHCCCHHH
MLRVVTNYTTHPTGAIDPSWRNLNWVKTLSYYRWFTVTEIQTKYRGYKLAEYVTEPIPGQ
HHHHHHCCCCCCCCCCCCCCCCCCHHEEEEEEEEEEEEEEHHHHCCEEHHHHHCCCCCCC
KIMTVPLGTDIMLNNYEQFMTAGLFQNMDHYKKTLRVEVDGPNGKLKILDQPVLITQHYQ
EEEEEECCCCEEECCHHHHHHHHHHHCHHHHCEEEEEEEECCCCEEEEECCCEEEEEHHH
TEITSEFIAGHV
HHHHHHHHCCCC
>Mature Secondary Structure
MLTNLLSLNFQVPFVAHKFDASKAIRGLRGMPRSVLLIGQANPPIGVDIKKRQRVTSEAE
CCCCEEEEEEECCEEEEECCHHHHHHHHCCCCCEEEEEECCCCCCCCEEHHHHHHHCHHH
AIGLLGEGSMLLAMWRAAKANADLGMPIDLAILADDATALAATGKVTLQVDANHASGEVS
HEEEECCCCCEEEEHHHHCCCCCCCCCEEEEEEECCCEEEEECCEEEEEEECCCCCCEEE
LYIGGKRVRIGIAVNDTATTAATKLLNAIQATPSLPVTAVAGTAAGEVKLTCRWKGATGN
EEECCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEECCCCCC
SIDLRSTYYADDRLPQGVTVTITSMAGGAVNPDITPVISAIKGFRATEYAMPYTDSANMG
EEEECEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCC
VLEAELERRWNFDNMQDGQAVTVMRGSEGEVVAWLGPRNSPAVHTICVTRDLTNPWETAA
EEEHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCHHHHH
MAAAAIESHVAIDPAVPFTGVALSGYVAARLEDDWEIDQRNNMLTAGGSVLETMEDGTAH
HHHHHHHHCEEECCCCCCCCEEECCEEEEEECCCCCCCCCCCEEECCCHHHHHHCCCHHH
MLRVVTNYTTHPTGAIDPSWRNLNWVKTLSYYRWFTVTEIQTKYRGYKLAEYVTEPIPGQ
HHHHHHCCCCCCCCCCCCCCCCCCHHEEEEEEEEEEEEEEHHHHCCEEHHHHHCCCCCCC
KIMTVPLGTDIMLNNYEQFMTAGLFQNMDHYKKTLRVEVDGPNGKLKILDQPVLITQHYQ
EEEEEECCCCEEECCHHHHHHHHHHHCHHHHCEEEEEEEECCCCEEEEECCCEEEEEHHH
TEITSEFIAGHV
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]