| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025491
Identifier: 238025491
GI number: 238025491
Start: 2711840
End: 2712274
Strand: Direct
Name: 238025491
Synonym: bglu_2g21860
Alternate gene names: NA
Gene position: 2711840-2712274 (Clockwise)
Preceding gene: 238025490
Following gene: 238025492
Centisome position: 95.92
GC content: 60.92
Gene sequence:
>435_bases ATGAACGGGGTGTCGGTGCAATGGGACTTCGCTGGCGATGATGCGCTGTGTCGGCACCTCGCAGCGATCGGTGGTGCAAC GTTCACGGGCGGGCACGAGGAAATCGGTGAATACATGCTCGGCCACATTCAGGATCGATTCGACCAGCAGATGCTCTGGG ATGGCAGTCCGATGCCGCAATCGGCCGCTGCGCTCGAGCGTCAAGGCCCGACGCTGATCGACTCGCGCGCCCTGTATGAC AGCTATGTGTACAACGTGATTCCTGACGGCCTGGAATTTGGAAACGGCGAGGAATGCGAGCGCATTCACCATTTCGGCGG TGACACTGGGCGTGACCGTTCCGTCCATATCGAGGCGCGACCTGTGCTCGGCGTCAACGATCACGATGGCGCGTTGACCG GCCAAATGCCGCTCGACGCAGTGAGGATGAGGTGA
Upstream 100 bases:
>100_bases GGACCGGAAAAGTCGGGGTGCTGCCACCGCCTGCAGCGAGCGGTCGTCGCGTGCTGTGGGGCAAGGTGCCGATCACCTAC AACTGGGACAGGTACGGGAA
Downstream 100 bases:
>100_bases TGGACACGAACGTCATGAGCACGGCGTTGCTCAATGCGCTCAACGTCGTGCTGCGCGAGAAGGCCGGCAAGCTCTTCAAA ACGATTGATCTGTACGGCGG
Product: virion morphogenesis protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MNGVSVQWDFAGDDALCRHLAAIGGATFTGGHEEIGEYMLGHIQDRFDQQMLWDGSPMPQSAAALERQGPTLIDSRALYD SYVYNVIPDGLEFGNGEECERIHHFGGDTGRDRSVHIEARPVLGVNDHDGALTGQMPLDAVRMR
Sequences:
>Translated_144_residues MNGVSVQWDFAGDDALCRHLAAIGGATFTGGHEEIGEYMLGHIQDRFDQQMLWDGSPMPQSAAALERQGPTLIDSRALYD SYVYNVIPDGLEFGNGEECERIHHFGGDTGRDRSVHIEARPVLGVNDHDGALTGQMPLDAVRMR >Mature_144_residues MNGVSVQWDFAGDDALCRHLAAIGGATFTGGHEEIGEYMLGHIQDRFDQQMLWDGSPMPQSAAALERQGPTLIDSRALYD SYVYNVIPDGLEFGNGEECERIHHFGGDTGRDRSVHIEARPVLGVNDHDGALTGQMPLDAVRMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15799; Mature: 15799
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGVSVQWDFAGDDALCRHLAAIGGATFTGGHEEIGEYMLGHIQDRFDQQMLWDGSPMPQ CCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCH SAAALERQGPTLIDSRALYDSYVYNVIPDGLEFGNGEECERIHHFGGDTGRDRSVHIEAR HHHHHHHCCCCEECHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEC PVLGVNDHDGALTGQMPLDAVRMR CEECCCCCCCEEECCCCHHHHCCC >Mature Secondary Structure MNGVSVQWDFAGDDALCRHLAAIGGATFTGGHEEIGEYMLGHIQDRFDQQMLWDGSPMPQ CCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCH SAAALERQGPTLIDSRALYDSYVYNVIPDGLEFGNGEECERIHHFGGDTGRDRSVHIEAR HHHHHHHCCCCEECHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEC PVLGVNDHDGALTGQMPLDAVRMR CEECCCCCCCEEECCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA