Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

Click here to switch to the map view.

The map label for this gene is 238024693

Identifier: 238024693

GI number: 238024693

Start: 1704807

End: 1706051

Strand: Reverse

Name: 238024693

Synonym: bglu_2g13280

Alternate gene names: NA

Gene position: 1706051-1704807 (Counterclockwise)

Preceding gene: 238024696

Following gene: 238024692

Centisome position: 60.34

GC content: 61.93

Gene sequence:

>1245_bases
ATGATCCAGCTTCTCCTCCATTTGCTCGGCGCGCGCTATCTTGGCCGTCATGTTACGAAACTGCTGATTCTCGGCGCGAT
CTGGCTTGGCGTCGGAGCATTCGTGGTAGTCGATGCGCTGGACGGCGCACTGTGGTTTCCGCTGCAAACCTTCGGCGTGC
TGCTGGCAACGGAAGGCGCCGCTGCGATCGTGCTGGCGAAGAGCGGCTTGTCTATACAGACCCGCTTTCGCGTTATAAAA
GGTCTGATCGGCGTGCTGATTGGCATACTCATCATCATCCGCCACCGCTATTCCGACTTTCTCCTCGCCATGACTTTCGG
TGCGGGCTTCGCGCTAGAGGGGGCTCTCCTTATCGCGGCGGCATGGGTGGTGCGGTACCGCCATTGGCGCTCCACCATGG
CGCTCGGCGCGATGAGCCTGGCGCTGGCGATCTTTTTCTTCCAACCGTACCCGACGCACTATCGCGGCACGGTGCCGTAC
TGCATCGGCCTGTGGATGGCCGTCAGCGGCTGCCGCATGATCTGGCTGTATCTCCGTGTGCGCAAGGGGGTGCTGGCGGA
AGTCGCGGACACGCCATTGAACGTGACTTCCAATGCGGTGCCGATGATCGTGCACGTATGGACACCTGTAGGTTCGGCAA
AGAGTAAGGCGCTCAACCGCCCGGTGATGGATCGCTATATCGCCGCAGTCGACGCCGACGGTGTGATTTCCACCGGTCAT
GCGGCGCTGGAGGCTGGCGATCTTTACTTGAGCCTCTACCCCGCAGTGGAGATCGACCGTTCTCCTGAAGAGTTCGCACG
TTTGCTGCGGGCCGATGCCTTCAACAACGTGGCTGGACGTTATCTGCCGAGCTATCCGGAAGAAGCGGCCAACTGGTGCG
AATCGACCGCGCGCATTACTTTCCGCCGTTTCGATTTTGCCCGTCTTCGCGACTTCGTGCGTGGCTATCAATCAACCGCG
ATCTACAACCTTACCAATCGAAACTGTTCGAGCACCGTCGCGGAAGGCCTCGAAGCCGCGCTCGCGGGCACGGCGTATCG
CGACGGTGGCTGGGCGGATGCGCTGCGCCCGATCGCGACGCCCGAATTGTGGATCGCCGCGCAGTTGCGCCATCGCGCCC
GCACCATGGCATGGACGCCGGGACTGGTGCTCGATTACGCACGCGCGCTACGCGTGGTGACCGATCCACCAGCGCTCGGT
TGGCTTGCACTGGCGACGCGGGTTTTCAGACATGCGCGCCGCTAG

Upstream 100 bases:

>100_bases
GCTAAAGATGTGTCTGCGTCGCACGATGCTCGATGCTCGATGATACGTCCGACGAGCAGGGCGTTCCGCCTCATGCTTTA
GCCGATAGCGTTACAAGAAA

Downstream 100 bases:

>100_bases
CCGCGCCGGATCGCCTCATGGAAAAGTTCACGCACGTGCGCATTGTCATGGGCATGATCGTCAGCCTTGGGCTGACACAT
ATGCTCAAGGGACTGAGTTT

Product: putative Zn-dependent protease

Products: NA

Alternate protein names: Zn-Dependent Proteases; Conserved Protein

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MIQLLLHLLGARYLGRHVTKLLILGAIWLGVGAFVVVDALDGALWFPLQTFGVLLATEGAAAIVLAKSGLSIQTRFRVIK
GLIGVLIGILIIIRHRYSDFLLAMTFGAGFALEGALLIAAAWVVRYRHWRSTMALGAMSLALAIFFFQPYPTHYRGTVPY
CIGLWMAVSGCRMIWLYLRVRKGVLAEVADTPLNVTSNAVPMIVHVWTPVGSAKSKALNRPVMDRYIAAVDADGVISTGH
AALEAGDLYLSLYPAVEIDRSPEEFARLLRADAFNNVAGRYLPSYPEEAANWCESTARITFRRFDFARLRDFVRGYQSTA
IYNLTNRNCSSTVAEGLEAALAGTAYRDGGWADALRPIATPELWIAAQLRHRARTMAWTPGLVLDYARALRVVTDPPALG
WLALATRVFRHARR

Sequences:

>Translated_414_residues
MIQLLLHLLGARYLGRHVTKLLILGAIWLGVGAFVVVDALDGALWFPLQTFGVLLATEGAAAIVLAKSGLSIQTRFRVIK
GLIGVLIGILIIIRHRYSDFLLAMTFGAGFALEGALLIAAAWVVRYRHWRSTMALGAMSLALAIFFFQPYPTHYRGTVPY
CIGLWMAVSGCRMIWLYLRVRKGVLAEVADTPLNVTSNAVPMIVHVWTPVGSAKSKALNRPVMDRYIAAVDADGVISTGH
AALEAGDLYLSLYPAVEIDRSPEEFARLLRADAFNNVAGRYLPSYPEEAANWCESTARITFRRFDFARLRDFVRGYQSTA
IYNLTNRNCSSTVAEGLEAALAGTAYRDGGWADALRPIATPELWIAAQLRHRARTMAWTPGLVLDYARALRVVTDPPALG
WLALATRVFRHARR
>Mature_414_residues
MIQLLLHLLGARYLGRHVTKLLILGAIWLGVGAFVVVDALDGALWFPLQTFGVLLATEGAAAIVLAKSGLSIQTRFRVIK
GLIGVLIGILIIIRHRYSDFLLAMTFGAGFALEGALLIAAAWVVRYRHWRSTMALGAMSLALAIFFFQPYPTHYRGTVPY
CIGLWMAVSGCRMIWLYLRVRKGVLAEVADTPLNVTSNAVPMIVHVWTPVGSAKSKALNRPVMDRYIAAVDADGVISTGH
AALEAGDLYLSLYPAVEIDRSPEEFARLLRADAFNNVAGRYLPSYPEEAANWCESTARITFRRFDFARLRDFVRGYQSTA
IYNLTNRNCSSTVAEGLEAALAGTAYRDGGWADALRPIATPELWIAAQLRHRARTMAWTPGLVLDYARALRVVTDPPALG
WLALATRVFRHARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45674; Mature: 45674

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQLLLHLLGARYLGRHVTKLLILGAIWLGVGAFVVVDALDGALWFPLQTFGVLLATEGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
AAIVLAKSGLSIQTRFRVIKGLIGVLIGILIIIRHRYSDFLLAMTFGAGFALEGALLIAA
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AWVVRYRHWRSTMALGAMSLALAIFFFQPYPTHYRGTVPYCIGLWMAVSGCRMIWLYLRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RKGVLAEVADTPLNVTSNAVPMIVHVWTPVGSAKSKALNRPVMDRYIAAVDADGVISTGH
HHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHCCCCCCEECCC
AALEAGDLYLSLYPAVEIDRSPEEFARLLRADAFNNVAGRYLPSYPEEAANWCESTARIT
HHHCCCCEEEEEECCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
FRRFDFARLRDFVRGYQSTAIYNLTNRNCSSTVAEGLEAALAGTAYRDGGWADALRPIAT
HHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCC
PELWIAAQLRHRARTMAWTPGLVLDYARALRVVTDPPALGWLALATRVFRHARR
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIQLLLHLLGARYLGRHVTKLLILGAIWLGVGAFVVVDALDGALWFPLQTFGVLLATEGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
AAIVLAKSGLSIQTRFRVIKGLIGVLIGILIIIRHRYSDFLLAMTFGAGFALEGALLIAA
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AWVVRYRHWRSTMALGAMSLALAIFFFQPYPTHYRGTVPYCIGLWMAVSGCRMIWLYLRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RKGVLAEVADTPLNVTSNAVPMIVHVWTPVGSAKSKALNRPVMDRYIAAVDADGVISTGH
HHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHCCCCCCEECCC
AALEAGDLYLSLYPAVEIDRSPEEFARLLRADAFNNVAGRYLPSYPEEAANWCESTARIT
HHHCCCCEEEEEECCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
FRRFDFARLRDFVRGYQSTAIYNLTNRNCSSTVAEGLEAALAGTAYRDGGWADALRPIAT
HHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCC
PELWIAAQLRHRARTMAWTPGLVLDYARALRVVTDPPALGWLALATRVFRHARR
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA