| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is purP [H]
Identifier: 237813347
GI number: 237813347
Start: 3024910
End: 3026358
Strand: Direct
Name: purP [H]
Synonym: GBP346_A3116
Alternate gene names: 237813347
Gene position: 3024910-3026358 (Clockwise)
Preceding gene: 237813346
Following gene: 237813348
Centisome position: 73.8
GC content: 67.15
Gene sequence:
>1449_bases ATGCGGCGGCGCGCGAAGCGCGCGCGTTGCGACGCGTTGCGCTCGACACGAGACACTGAGGAGAGCTTAACGATGGACCT CTATCAAGGCACCGCCGCGCCCGCGAAGCGCTCGGCGCTCGAGCGCCACTTCGGCATCCGCGAGTCCGGCTCGCGGCTGC GCACCGAGATCGTCGCCGGCGTGACGACATTCCTCACCGCGATGTACATCATCGTCGTGAATCCCGGCATCCTGTCGCAG GCGGGCGTGCCGTTCGCAGCCGCGCTCACGGCGACCGTGATCGTCAGCTTCCTCGGCAGTTGCGCGATGGGCCTGTACGC GCGCAATCCGGTGCTCGTCGCGCCGGGCATGGGAATGAACGCGCTCTTCACGTTCGTGATGGTCCACGGCGGCAAGATGC CGTGGCAAACCGCGCTCGGCTGCGTGTTCTGGGCAGGCGTGCTGTTCGCGACACTCGCCGCGTTCAATGCGCGCAAGCTC GTCGTCGACGCGATTCCGGCGAACCTGCGGCATGCGGTGTCGTGCGGCATCGGCCTGTTCATCAGCCTGATCGGGCTCGT GAACGCGAAGTTCATCGTCGGCGATCCGGTGACGATCGTTCACGCGACGTCGCTCAACCCTGTGATCGTCACGTTTCTCG CCGGCCTCGCGGTCACGACCGTGCTCGTCGTGCGCCGCGTGACGGGCGCGCTGATGCTCGGCATCGTCGCGACGACGCTG CTCGCGATCCCGATCGGCCGCGTGTGGGGCGACGGCAGCGCGTACTGGCCCGCCGCGATCGCGACGAAGACGCTCGTCAA CTGGAACGGCCTCGTTGCCGCGCCGGATTTCTCCGCGCTCGGCCAGCTCGATCTGCTCGGCTCGCTGAAGGTCGCGTACT GGCCGTTCATCTTCGTGATGCTGTTCACCGCGTTCTTCGACGCGCTCTCGACGTTCATGGCGATCTCGGAGGCGGGCAAC CTGCGCGACCGCGACGGCAATCCGCGCAACATCCGCCAATCGATGATCGTCGACGCGTTCTCGGCCGTCGTGTCCGCGCC GCTCGGCACGAGCCCCGCGAACGCGTACATCGAATCGGCGGCCGGCATCTCGGCGGGCGGCCGCACGGGGCTCGTCGCGG TGGTCGCGGGCTTGTGCTTCGTGCCGTTCCTGTTCCTGTCGCCGCTGCTCTCGCTCGTGCCGGCGATCGCGACGGCGCCC GCGCTCGTGCTCGTCGGCGTATTCATGATGGAATCGATCACGAAGATCGAATGGCACCGCTTCGACGAGGCGATCCCCGC GTTTCTCGCGATGATCCTGATACCGCTCACATACTCGATCACCGAAGGCATCGCATACGGCTTTCTCGCGTTCGTCGTGC TCAAGCTCTTCACCGGCCGCCGCGGCGACGTGAAGCCCGCGATGTGGGTGGTCGCCGCGCTGTCGCTGCTGCTCGTCGCA CAACTCTGA
Upstream 100 bases:
>100_bases GAAGCGTCGTTCGTGAGCGCCGACGAACGCGCGGCGCTGATCGCGAAGCTCGACGCGCACTGGCACGCGGCCTGACGGCC GCGCAACGCGCGCGCCCCGC
Downstream 100 bases:
>100_bases TTTCAATCGATACGGATTCCCCACGATGACTCAAACCGCTTTCCGCGCCCGCCTGCTGAGGTTCGACGGCGACCCCGCGC AATCGGACGATGCGCTCGCG
Product: xanthine/uracil permease family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MRRRAKRARCDALRSTRDTEESLTMDLYQGTAAPAKRSALERHFGIRESGSRLRTEIVAGVTTFLTAMYIIVVNPGILSQ AGVPFAAALTATVIVSFLGSCAMGLYARNPVLVAPGMGMNALFTFVMVHGGKMPWQTALGCVFWAGVLFATLAAFNARKL VVDAIPANLRHAVSCGIGLFISLIGLVNAKFIVGDPVTIVHATSLNPVIVTFLAGLAVTTVLVVRRVTGALMLGIVATTL LAIPIGRVWGDGSAYWPAAIATKTLVNWNGLVAAPDFSALGQLDLLGSLKVAYWPFIFVMLFTAFFDALSTFMAISEAGN LRDRDGNPRNIRQSMIVDAFSAVVSAPLGTSPANAYIESAAGISAGGRTGLVAVVAGLCFVPFLFLSPLLSLVPAIATAP ALVLVGVFMMESITKIEWHRFDEAIPAFLAMILIPLTYSITEGIAYGFLAFVVLKLFTGRRGDVKPAMWVVAALSLLLVA QL
Sequences:
>Translated_482_residues MRRRAKRARCDALRSTRDTEESLTMDLYQGTAAPAKRSALERHFGIRESGSRLRTEIVAGVTTFLTAMYIIVVNPGILSQ AGVPFAAALTATVIVSFLGSCAMGLYARNPVLVAPGMGMNALFTFVMVHGGKMPWQTALGCVFWAGVLFATLAAFNARKL VVDAIPANLRHAVSCGIGLFISLIGLVNAKFIVGDPVTIVHATSLNPVIVTFLAGLAVTTVLVVRRVTGALMLGIVATTL LAIPIGRVWGDGSAYWPAAIATKTLVNWNGLVAAPDFSALGQLDLLGSLKVAYWPFIFVMLFTAFFDALSTFMAISEAGN LRDRDGNPRNIRQSMIVDAFSAVVSAPLGTSPANAYIESAAGISAGGRTGLVAVVAGLCFVPFLFLSPLLSLVPAIATAP ALVLVGVFMMESITKIEWHRFDEAIPAFLAMILIPLTYSITEGIAYGFLAFVVLKLFTGRRGDVKPAMWVVAALSLLLVA QL >Mature_482_residues MRRRAKRARCDALRSTRDTEESLTMDLYQGTAAPAKRSALERHFGIRESGSRLRTEIVAGVTTFLTAMYIIVVNPGILSQ AGVPFAAALTATVIVSFLGSCAMGLYARNPVLVAPGMGMNALFTFVMVHGGKMPWQTALGCVFWAGVLFATLAAFNARKL VVDAIPANLRHAVSCGIGLFISLIGLVNAKFIVGDPVTIVHATSLNPVIVTFLAGLAVTTVLVVRRVTGALMLGIVATTL LAIPIGRVWGDGSAYWPAAIATKTLVNWNGLVAAPDFSALGQLDLLGSLKVAYWPFIFVMLFTAFFDALSTFMAISEAGN LRDRDGNPRNIRQSMIVDAFSAVVSAPLGTSPANAYIESAAGISAGGRTGLVAVVAGLCFVPFLFLSPLLSLVPAIATAP ALVLVGVFMMESITKIEWHRFDEAIPAFLAMILIPLTYSITEGIAYGFLAFVVLKLFTGRRGDVKPAMWVVAALSLLLVA QL
Specific function: High-affinity uptake of adenine [H]
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790150, Length=453, Percent_Identity=39.514348785872, Blast_Score=313, Evalue=1e-86, Organism=Escherichia coli, GI87082309, Length=441, Percent_Identity=38.3219954648526, Blast_Score=293, Evalue=2e-80, Organism=Escherichia coli, GI1790499, Length=436, Percent_Identity=36.9266055045872, Blast_Score=243, Evalue=2e-65, Organism=Escherichia coli, GI48994909, Length=443, Percent_Identity=36.568848758465, Blast_Score=238, Evalue=8e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 51156; Mature: 51156
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRAKRARCDALRSTRDTEESLTMDLYQGTAAPAKRSALERHFGIRESGSRLRTEIVAG CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH VTTFLTAMYIIVVNPGILSQAGVPFAAALTATVIVSFLGSCAMGLYARNPVLVAPGMGMN HHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHH ALFTFVMVHGGKMPWQTALGCVFWAGVLFATLAAFNARKLVVDAIPANLRHAVSCGIGLF HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHH ISLIGLVNAKFIVGDPVTIVHATSLNPVIVTFLAGLAVTTVLVVRRVTGALMLGIVATTL HHHHHHHCCCEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAIPIGRVWGDGSAYWPAAIATKTLVNWNGLVAAPDFSALGQLDLLGSLKVAYWPFIFVM HHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHH LFTAFFDALSTFMAISEAGNLRDRDGNPRNIRQSMIVDAFSAVVSAPLGTSPANAYIESA HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AGISAGGRTGLVAVVAGLCFVPFLFLSPLLSLVPAIATAPALVLVGVFMMESITKIEWHR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDEAIPAFLAMILIPLTYSITEGIAYGFLAFVVLKLFTGRRGDVKPAMWVVAALSLLLVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH QL CC >Mature Secondary Structure MRRRAKRARCDALRSTRDTEESLTMDLYQGTAAPAKRSALERHFGIRESGSRLRTEIVAG CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH VTTFLTAMYIIVVNPGILSQAGVPFAAALTATVIVSFLGSCAMGLYARNPVLVAPGMGMN HHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHH ALFTFVMVHGGKMPWQTALGCVFWAGVLFATLAAFNARKLVVDAIPANLRHAVSCGIGLF HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHH ISLIGLVNAKFIVGDPVTIVHATSLNPVIVTFLAGLAVTTVLVVRRVTGALMLGIVATTL HHHHHHHCCCEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAIPIGRVWGDGSAYWPAAIATKTLVNWNGLVAAPDFSALGQLDLLGSLKVAYWPFIFVM HHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHH LFTAFFDALSTFMAISEAGNLRDRDGNPRNIRQSMIVDAFSAVVSAPLGTSPANAYIESA HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AGISAGGRTGLVAVVAGLCFVPFLFLSPLLSLVPAIATAPALVLVGVFMMESITKIEWHR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDEAIPAFLAMILIPLTYSITEGIAYGFLAFVVLKLFTGRRGDVKPAMWVVAALSLLLVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH QL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]