| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is guaD [H]
Identifier: 237813348
GI number: 237813348
Start: 3026384
End: 3027694
Strand: Direct
Name: guaD [H]
Synonym: GBP346_A3117
Alternate gene names: 237813348
Gene position: 3026384-3027694 (Clockwise)
Preceding gene: 237813347
Following gene: 237813349
Centisome position: 73.84
GC content: 70.71
Gene sequence:
>1311_bases ATGACTCAAACCGCTTTCCGCGCCCGCCTGCTGAGGTTCGACGGCGACCCCGCGCAATCGGACGATGCGCTCGCGTACGA CGAGGACGGCCTGCTGATCGTCGAGAACGGGCGCGTCGTCGCGGCGGGCGCCCATGCGGCGCTCGCCGCGCGCCTCGCGC CCGGCGCGACGCTCGTCGAGATGCGCGACAAGCTGATCGCGCCCGGCTTCATCGACACGCACGTGCACTATCCGCAGACC GAAATGATCGCCTCGCCGGCGCCGGGCCTGTTGCCGTGGCTCGACCGCTACACGTTCCCGACCGAGCGGCGCTTCGCCGA TCCCGCGCATGCGCGCGACGTCGCCGAGTTCTTCCTCGATACGCTGCTCGCGTGCGGCACGACGACGGCGCTCGTCTACT GCACGGTGCACAAGCAGTCGGCCGACGCGCTGTTCGGCGCGAGCGAGGCGCGCGGCTTGCGGATGATCGCGGGCAAGGTG CTGATGGACCGCCACTGCCCCGAGTTCCTGCGCGACACCGCGCAATCGGGCTACGACGACAGCGCCGAGCTGATCGCCCG CTGGCACGGCCACGGCCGGCAGTCGTACGCGCTCACGCCGCGCTTCGCGCCGACATCGACGCACGCACAGCTCGAAGCGT GCGGCGCGCTCGCCCGGCTTCATCCGGACGTGTTCATCCAGAGCCACGTCGCGGAGAATCTCGACGAGCTCCGCTGGGCG GCCGAGCTGTTTCCCGAGCGGCGCAGCTATCTCGATGTCTACGATCACTACGGGCTGCTGCGCCGTCGCGCCGTGTACGG CCACTGCATCCATCTCGACGACGACGACCGCCGGCGCTTCGCCGAAACGGGCGCGATCGCCGCGCACTGCCCGACGTCGA ACCTGTTCCTCGGCAGCGGCCTGTTCGATTTCGAGCGCGCGAACGCGCGGCACATGGCCGTCACGCTCGCGACCGACGTC GGCGGCGGCACATCGTTCTCGATGCTCCAAACGATGAACGAAGCGCACAAGATCGCGCGGATGACGGGCCATCACCTGAG CGCGACGCGCATGTTCTGGCTCGCGACGGCAGGCGCCGCGCACGCGCTCGATCTCGCGGACACGATCGGCACGCTCGCGC CGCACGCGGAAGCCGACTTCGTCGTGCTCGATCCTGCCGCGACGCCGCTGCTCGCGCGCCGCACCGCGCGCGCGGAATCG CTCGAGGAGCTGCTGTTCGCGCTCGCGCTGCTCGGCGACGATCGCGCGGTCTATCGCACGTATGCCGCCGGCCGCTGCGT GCACCGGCGCGACATCGCCGACGCGGGCTGA
Upstream 100 bases:
>100_bases GGCCGCCGCGGCGACGTGAAGCCCGCGATGTGGGTGGTCGCCGCGCTGTCGCTGCTGCTCGTCGCACAACTCTGATTTCA ATCGATACGGATTCCCCACG
Downstream 100 bases:
>100_bases GCGCGCGAACGCGGCCGGGGCCGGGCCGCCAGGACGGCGGGCCGCGCGGCGCGCGCCGCCGCCGCGCGATCTCGCGGCGG TTGTCAGCCTCGGCGGCCTC
Product: guanine deaminase
Products: NA
Alternate protein names: Guanase; Guanine aminase; Guanine aminohydrolase; GAH [H]
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MTQTAFRARLLRFDGDPAQSDDALAYDEDGLLIVENGRVVAAGAHAALAARLAPGATLVEMRDKLIAPGFIDTHVHYPQT EMIASPAPGLLPWLDRYTFPTERRFADPAHARDVAEFFLDTLLACGTTTALVYCTVHKQSADALFGASEARGLRMIAGKV LMDRHCPEFLRDTAQSGYDDSAELIARWHGHGRQSYALTPRFAPTSTHAQLEACGALARLHPDVFIQSHVAENLDELRWA AELFPERRSYLDVYDHYGLLRRRAVYGHCIHLDDDDRRRFAETGAIAAHCPTSNLFLGSGLFDFERANARHMAVTLATDV GGGTSFSMLQTMNEAHKIARMTGHHLSATRMFWLATAGAAHALDLADTIGTLAPHAEADFVVLDPAATPLLARRTARAES LEELLFALALLGDDRAVYRTYAAGRCVHRRDIADAG
Sequences:
>Translated_436_residues MTQTAFRARLLRFDGDPAQSDDALAYDEDGLLIVENGRVVAAGAHAALAARLAPGATLVEMRDKLIAPGFIDTHVHYPQT EMIASPAPGLLPWLDRYTFPTERRFADPAHARDVAEFFLDTLLACGTTTALVYCTVHKQSADALFGASEARGLRMIAGKV LMDRHCPEFLRDTAQSGYDDSAELIARWHGHGRQSYALTPRFAPTSTHAQLEACGALARLHPDVFIQSHVAENLDELRWA AELFPERRSYLDVYDHYGLLRRRAVYGHCIHLDDDDRRRFAETGAIAAHCPTSNLFLGSGLFDFERANARHMAVTLATDV GGGTSFSMLQTMNEAHKIARMTGHHLSATRMFWLATAGAAHALDLADTIGTLAPHAEADFVVLDPAATPLLARRTARAES LEELLFALALLGDDRAVYRTYAAGRCVHRRDIADAG >Mature_435_residues TQTAFRARLLRFDGDPAQSDDALAYDEDGLLIVENGRVVAAGAHAALAARLAPGATLVEMRDKLIAPGFIDTHVHYPQTE MIASPAPGLLPWLDRYTFPTERRFADPAHARDVAEFFLDTLLACGTTTALVYCTVHKQSADALFGASEARGLRMIAGKVL MDRHCPEFLRDTAQSGYDDSAELIARWHGHGRQSYALTPRFAPTSTHAQLEACGALARLHPDVFIQSHVAENLDELRWAA ELFPERRSYLDVYDHYGLLRRRAVYGHCIHLDDDDRRRFAETGAIAAHCPTSNLFLGSGLFDFERANARHMAVTLATDVG GGTSFSMLQTMNEAHKIARMTGHHLSATRMFWLATAGAAHALDLADTIGTLAPHAEADFVVLDPAATPLLARRTARAESL EELLFALALLGDDRAVYRTYAAGRCVHRRDIADAG
Specific function: Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=378, Percent_Identity=31.4814814814815, Blast_Score=187, Evalue=2e-47, Organism=Escherichia coli, GI1789249, Length=416, Percent_Identity=48.0769230769231, Blast_Score=429, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6319963, Length=409, Percent_Identity=30.8068459657702, Blast_Score=189, Evalue=8e-49, Organism=Drosophila melanogaster, GI24643849, Length=431, Percent_Identity=31.554524361949, Blast_Score=196, Evalue=4e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR014311 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.3 [H]
Molecular weight: Translated: 47814; Mature: 47682
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTAFRARLLRFDGDPAQSDDALAYDEDGLLIVENGRVVAAGAHAALAARLAPGATLVE CCCHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCEEEEECCHHHHHHHHCCCCHHHH MRDKLIAPGFIDTHVHYPQTEMIASPAPGLLPWLDRYTFPTERRFADPAHARDVAEFFLD HHHHHCCCCCEECCCCCCCHHHHCCCCCCHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHH TLLACGTTTALVYCTVHKQSADALFGASEARGLRMIAGKVLMDRHCPEFLRDTAQSGYDD HHHHCCCCEEEEEEEEECCCCHHHHCCHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCC SAELIARWHGHGRQSYALTPRFAPTSTHAQLEACGALARLHPDVFIQSHVAENLDELRWA HHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH AELFPERRSYLDVYDHYGLLRRRAVYGHCIHLDDDDRRRFAETGAIAAHCPTSNLFLGSG HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHCCCEEEECCCCCEEEECC LFDFERANARHMAVTLATDVGGGTSFSMLQTMNEAHKIARMTGHHLSATRMFWLATAGAA CCHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHEEEEEECCCH HALDLADTIGTLAPHAEADFVVLDPAATPLLARRTARAESLEELLFALALLGDDRAVYRT HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH YAAGRCVHRRDIADAG HHHCCHHHHHCCCCCC >Mature Secondary Structure TQTAFRARLLRFDGDPAQSDDALAYDEDGLLIVENGRVVAAGAHAALAARLAPGATLVE CCHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCEEEEECCHHHHHHHHCCCCHHHH MRDKLIAPGFIDTHVHYPQTEMIASPAPGLLPWLDRYTFPTERRFADPAHARDVAEFFLD HHHHHCCCCCEECCCCCCCHHHHCCCCCCHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHH TLLACGTTTALVYCTVHKQSADALFGASEARGLRMIAGKVLMDRHCPEFLRDTAQSGYDD HHHHCCCCEEEEEEEEECCCCHHHHCCHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCC SAELIARWHGHGRQSYALTPRFAPTSTHAQLEACGALARLHPDVFIQSHVAENLDELRWA HHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH AELFPERRSYLDVYDHYGLLRRRAVYGHCIHLDDDDRRRFAETGAIAAHCPTSNLFLGSG HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHCCCEEEECCCCCEEEECC LFDFERANARHMAVTLATDVGGGTSFSMLQTMNEAHKIARMTGHHLSATRMFWLATAGAA CCHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHEEEEEECCCH HALDLADTIGTLAPHAEADFVVLDPAATPLLARRTARAESLEELLFALALLGDDRAVYRT HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH YAAGRCVHRRDIADAG HHHCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 10913105 [H]