| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is add [H]
Identifier: 237813346
GI number: 237813346
Start: 3023859
End: 3024884
Strand: Direct
Name: add [H]
Synonym: GBP346_A3115
Alternate gene names: 237813346
Gene position: 3023859-3024884 (Clockwise)
Preceding gene: 237813345
Following gene: 237813347
Centisome position: 73.78
GC content: 66.47
Gene sequence:
>1026_bases ATGACCCCGACATTCAAAGACAAGATCGCCCGTGCGCCGAAGGCCGAGCTGCACATCCACATCGAAGGCTCGCTCGAGCC CGAGCTGATCTTCGAGCTCGCGCAGCGCAACGGCGTGAAGCTCGCGTACGAATCGATCGACGCGCTGCGCGCCGCGTACG CGTTCACCGATCTGCAGTCGTTCCTCGACATCTATTACGCCGGCGCGAGCGTGCTCCTCACCGAGCAGGATTTCTACGAC ATGACGGCCGCATACGTCGAGCGCGCGCTCGCCGATCACGTCGTGCACGCGGAGATCTTCTTCGATCCGCAGACGCACAC CGAGCGCGGCGTGCCGATCGAGACGGTCGTCGCCGGCATCGATCGCGCGCTCGCCGACGCGGAAAAACGCGGCTTCTCGA GCAAGCTGATCCTCTGCTTCCTGCGCCACCTGTCCGAGGAAAGCGCGCTCGCGACGTTCGACGCGGCGCTGCCGCTCTTC GATCGCTATGCGCGGCGCCTGATCGGCGTGGGGCTCGATTCGTCCGAGCGCGGCAATCCGCCGTCGAAGTTCGCGCGCGT GTTCGCGAAGGCGCGAGAGCGGGGCCTGAAGCTCGTCGCGCACGCGGGCGAGGAAGGCCCGCCCGAATACGTGACGCAGG CGCTCGACGTGCTGAAGATCGACCGCGTCGATCACGGCGTGCGCAGCGCCGAGGACGCGGCGCTCGTCGCGCGCCTTGCC GGCGAGAAGATCGCGCTCACCGTCTGCCCGCTGTCGAACCTGAAGCTCTGCGTGTTCGACGACCTGACGAAGCACACGCT GAAGACGCTGCTCGATCGCGGCATCGCGGTGACGATCAATTCCGACGACCCGGCGTATTTCGGCGGCTACGTCAACGAAA ACTACTTCGCGACCGTCGACGCGCTGCAGCTTGGCGAGGCCGACGTCTACACGGTGATCAGGAACGGCTTCGAAGCGTCG TTCGTGAGCGCCGACGAACGCGCGGCGCTGATCGCGAAGCTCGACGCGCACTGGCACGCGGCCTGA
Upstream 100 bases:
>100_bases TCGACGCGCGGCGCGCGAACGGGCGTCCGGCCGCGCCGCCCGGCGCGAGCGCGTGCTGAATCGCCGCCATCCAAACCCGC ATTCGACCCAAAAAACCACA
Downstream 100 bases:
>100_bases CGGCCGCGCAACGCGCGCGCCCCGCATGCGGCGGCGCGCGAAGCGCGCGCGTTGCGACGCGTTGCGCTCGACACGAGACA CTGAGGAGAGCTTAACGATG
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MTPTFKDKIARAPKAELHIHIEGSLEPELIFELAQRNGVKLAYESIDALRAAYAFTDLQSFLDIYYAGASVLLTEQDFYD MTAAYVERALADHVVHAEIFFDPQTHTERGVPIETVVAGIDRALADAEKRGFSSKLILCFLRHLSEESALATFDAALPLF DRYARRLIGVGLDSSERGNPPSKFARVFAKARERGLKLVAHAGEEGPPEYVTQALDVLKIDRVDHGVRSAEDAALVARLA GEKIALTVCPLSNLKLCVFDDLTKHTLKTLLDRGIAVTINSDDPAYFGGYVNENYFATVDALQLGEADVYTVIRNGFEAS FVSADERAALIAKLDAHWHAA
Sequences:
>Translated_341_residues MTPTFKDKIARAPKAELHIHIEGSLEPELIFELAQRNGVKLAYESIDALRAAYAFTDLQSFLDIYYAGASVLLTEQDFYD MTAAYVERALADHVVHAEIFFDPQTHTERGVPIETVVAGIDRALADAEKRGFSSKLILCFLRHLSEESALATFDAALPLF DRYARRLIGVGLDSSERGNPPSKFARVFAKARERGLKLVAHAGEEGPPEYVTQALDVLKIDRVDHGVRSAEDAALVARLA GEKIALTVCPLSNLKLCVFDDLTKHTLKTLLDRGIAVTINSDDPAYFGGYVNENYFATVDALQLGEADVYTVIRNGFEAS FVSADERAALIAKLDAHWHAA >Mature_340_residues TPTFKDKIARAPKAELHIHIEGSLEPELIFELAQRNGVKLAYESIDALRAAYAFTDLQSFLDIYYAGASVLLTEQDFYDM TAAYVERALADHVVHAEIFFDPQTHTERGVPIETVVAGIDRALADAEKRGFSSKLILCFLRHLSEESALATFDAALPLFD RYARRLIGVGLDSSERGNPPSKFARVFAKARERGLKLVAHAGEEGPPEYVTQALDVLKIDRVDHGVRSAEDAALVARLAG EKIALTVCPLSNLKLCVFDDLTKHTLKTLLDRGIAVTINSDDPAYFGGYVNENYFATVDALQLGEADVYTVIRNGFEASF VSADERAALIAKLDAHWHAA
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=352, Percent_Identity=26.9886363636364, Blast_Score=116, Evalue=3e-26, Organism=Escherichia coli, GI1787910, Length=330, Percent_Identity=30.3030303030303, Blast_Score=134, Evalue=1e-32, Organism=Caenorhabditis elegans, GI32565969, Length=342, Percent_Identity=22.8070175438596, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17538512, Length=342, Percent_Identity=22.8070175438596, Blast_Score=75, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6324188, Length=335, Percent_Identity=41.4925373134328, Blast_Score=274, Evalue=2e-74, Organism=Drosophila melanogaster, GI24645260, Length=329, Percent_Identity=23.4042553191489, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 37514; Mature: 37383
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTFKDKIARAPKAELHIHIEGSLEPELIFELAQRNGVKLAYESIDALRAAYAFTDLQS CCCCHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHH FLDIYYAGASVLLTEQDFYDMTAAYVERALADHVVHAEIFFDPQTHTERGVPIETVVAGI HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHH DRALADAEKRGFSSKLILCFLRHLSEESALATFDAALPLFDRYARRLIGVGLDSSERGNP HHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PSKFARVFAKARERGLKLVAHAGEEGPPEYVTQALDVLKIDRVDHGVRSAEDAALVARLA HHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC GEKIALTVCPLSNLKLCVFDDLTKHTLKTLLDRGIAVTINSDDPAYFGGYVNENYFATVD CCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHCCEEEEECCCCCCEECCCCCCCEEEEEH ALQLGEADVYTVIRNGFEASFVSADERAALIAKLDAHWHAA HHHCCCHHHHHHHHCCCCHHHCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure TPTFKDKIARAPKAELHIHIEGSLEPELIFELAQRNGVKLAYESIDALRAAYAFTDLQS CCCHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHH FLDIYYAGASVLLTEQDFYDMTAAYVERALADHVVHAEIFFDPQTHTERGVPIETVVAGI HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHH DRALADAEKRGFSSKLILCFLRHLSEESALATFDAALPLFDRYARRLIGVGLDSSERGNP HHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PSKFARVFAKARERGLKLVAHAGEEGPPEYVTQALDVLKIDRVDHGVRSAEDAALVARLA HHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC GEKIALTVCPLSNLKLCVFDDLTKHTLKTLLDRGIAVTINSDDPAYFGGYVNENYFATVD CCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHCCEEEEECCCCCCEECCCCCCCEEEEEH ALQLGEADVYTVIRNGFEASFVSADERAALIAKLDAHWHAA HHHCCCHHHHHHHHCCCCHHHCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA