| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is pgcA [H]
Identifier: 229918158
GI number: 229918158
Start: 2395879
End: 2397606
Strand: Direct
Name: pgcA [H]
Synonym: EAT1b_2438
Alternate gene names: 229918158
Gene position: 2395879-2397606 (Clockwise)
Preceding gene: 229918156
Following gene: 229918159
Centisome position: 79.87
GC content: 50.0
Gene sequence:
>1728_bases ATGACATGGCAACAAACGTATGACCGTTGGAATCAATTCGAAGGGCTCGAGCCGCATTTACGTGTGGAACTCGAAGAACT CGCAAAAGATGAGACCACGTTAGAAGATGCATTTTATAAGACGCTCGAGTTCGGAACAGGCGGGATGCGTGGAGAAATCG GACCGGGTGCAAACCGAATGAACGTCTATACGATTCGAAAAGCGTCACAAGGATTTGCTGATTTTATCTCAGCATCAGGG GAAGAGGCGAAACGTCATGGCGTCGTCATCGCCCATGACTCACGTCATTTTTCGCCCGAGTTTGCGTTAGAGGCAGCGCG GACATTGGCGTCAAACGGAATCAAAACGTATTTGTTCCCAAGTTTGCGTGCCACACCTGAGTTGTCGTTTGCCGTTCGTC ATTTAAATGCGTTCGGTGGCATCGTAATCACGGCGAGCCACAACCCGCCGGAATATAACGGGTTCAAGGTATATGGGGCA GACGGGGGACAGCTTCCACCAGCAGAAGCGGATGAACTCGTGACGTATGTCAATGCGATTGAAGACGAGCTGAAAATTGA GATTGAAGATGAAGCGGCGCTCCGACAAACGGGGCTACTCCTCACCGTCGACTCATCAGTCGATGAAGCTTATATGGAGG CACTCCAGTCGATTCGAATCCACCGTGACATACAGGACAGCCCTCTCCGAATTGTCTATTCGCCACTCCACGGGACGGGA CGCCGTCCGGTCATGGAAGGGCTGAAGGCATATGGATTTGAGCACGTGACCATCGTAGAAGAGCAGGCAGAGCCAGACGG TGCGTTCCCGACGGTCAGTTATCCGAACCCGGAAGAAAAGGCTGCATTTAAATTAGCGATGGAATACGGGGACCGGGTCG AGGCTGATTTGCTCATGGCGACGGACCCGGATGCAGACCGTGTCGGCTTAACCGTGCGCGGACGGGACGGGGAATGGTTC GTCTTGACCGGTAACCAAACGGGTGCGCTATTAATGGAATATATCCTGTCGCAAAAGAGTGAAACAGGTACGTTACCTTC GAATGGGTTTGTCGCCAAGACGATCGTCACGTCTGAACTCGGTGCTGCGATTGCAAAAGCGTACGGCGTACATCTCGAAA ATACGTTGACTGGATTCAAGTTCATCGGTGAGAAGATCAAACAATATGAAGAATCAGGCGAATATGAATTCCTCTTTGGG TATGAAGAAAGCTACGGCTATTTGATTGGAGACTTCTGTCGTGATAAAGATGCCGTTCAGGCTTGTTTACTCGCGGCCGA GATGGCAGCTTATCATAAACAGCACGGTCGGACGCTTTATGATGCGTTACAGTCGATTTACGAGAAGTATGGATTCTACG AAGAGTCCTTGCAGTCGATGACGTTAAAAGGAAAAGCTGGTCTCGAGCAAATCGGACGGATGATGGAAGCGTTCCGTGCC AATCCACCAAAAGAAGTCGGTGGATATGAAGTCGTTCGTTTTGAAGACTATAAGAAACAAGTGGCGACCGACTTACAGTC CGGTAAATCGGAAACGATTGAATTGCCATCATCAAACGTCTTGAAATTCGTCTTTGCGGACGGTTCGTGGTTCTGTCTTC GCCCATCTGGAACCGAGCCGAAAATCAAGTTTTATTTCAGTGTGCATGCGGATCGTGCCGAGAAGACGACCGCCAAACGT GAATCGATTGAAGCGGATGTTATGAAACAAGCGAAAGCGATTGATTGA
Upstream 100 bases:
>100_bases TAATATCACCTCGAGGTTTCGTTACTCTCATCGTATACAAGATGGAAGCAATTGGCGAGTAATTCGATTGAATTTTTTGA GGGTGAAAGGGGAATGAATC
Downstream 100 bases:
>100_bases TGAAGAACATCACTCTAGAAATAGGGTGATGTTTTTTGTTTGACATGAAGACATCGCGCCAGTATGATGAGGATATTGTT TAAAACCGTGTAATCATATA
Product: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
Products: NA
Alternate protein names: PGM; Alpha-phosphoglucomutase; Glucose phosphomutase [H]
Number of amino acids: Translated: 575; Mature: 574
Protein sequence:
>575_residues MTWQQTYDRWNQFEGLEPHLRVELEELAKDETTLEDAFYKTLEFGTGGMRGEIGPGANRMNVYTIRKASQGFADFISASG EEAKRHGVVIAHDSRHFSPEFALEAARTLASNGIKTYLFPSLRATPELSFAVRHLNAFGGIVITASHNPPEYNGFKVYGA DGGQLPPAEADELVTYVNAIEDELKIEIEDEAALRQTGLLLTVDSSVDEAYMEALQSIRIHRDIQDSPLRIVYSPLHGTG RRPVMEGLKAYGFEHVTIVEEQAEPDGAFPTVSYPNPEEKAAFKLAMEYGDRVEADLLMATDPDADRVGLTVRGRDGEWF VLTGNQTGALLMEYILSQKSETGTLPSNGFVAKTIVTSELGAAIAKAYGVHLENTLTGFKFIGEKIKQYEESGEYEFLFG YEESYGYLIGDFCRDKDAVQACLLAAEMAAYHKQHGRTLYDALQSIYEKYGFYEESLQSMTLKGKAGLEQIGRMMEAFRA NPPKEVGGYEVVRFEDYKKQVATDLQSGKSETIELPSSNVLKFVFADGSWFCLRPSGTEPKIKFYFSVHADRAEKTTAKR ESIEADVMKQAKAID
Sequences:
>Translated_575_residues MTWQQTYDRWNQFEGLEPHLRVELEELAKDETTLEDAFYKTLEFGTGGMRGEIGPGANRMNVYTIRKASQGFADFISASG EEAKRHGVVIAHDSRHFSPEFALEAARTLASNGIKTYLFPSLRATPELSFAVRHLNAFGGIVITASHNPPEYNGFKVYGA DGGQLPPAEADELVTYVNAIEDELKIEIEDEAALRQTGLLLTVDSSVDEAYMEALQSIRIHRDIQDSPLRIVYSPLHGTG RRPVMEGLKAYGFEHVTIVEEQAEPDGAFPTVSYPNPEEKAAFKLAMEYGDRVEADLLMATDPDADRVGLTVRGRDGEWF VLTGNQTGALLMEYILSQKSETGTLPSNGFVAKTIVTSELGAAIAKAYGVHLENTLTGFKFIGEKIKQYEESGEYEFLFG YEESYGYLIGDFCRDKDAVQACLLAAEMAAYHKQHGRTLYDALQSIYEKYGFYEESLQSMTLKGKAGLEQIGRMMEAFRA NPPKEVGGYEVVRFEDYKKQVATDLQSGKSETIELPSSNVLKFVFADGSWFCLRPSGTEPKIKFYFSVHADRAEKTTAKR ESIEADVMKQAKAID >Mature_574_residues TWQQTYDRWNQFEGLEPHLRVELEELAKDETTLEDAFYKTLEFGTGGMRGEIGPGANRMNVYTIRKASQGFADFISASGE EAKRHGVVIAHDSRHFSPEFALEAARTLASNGIKTYLFPSLRATPELSFAVRHLNAFGGIVITASHNPPEYNGFKVYGAD GGQLPPAEADELVTYVNAIEDELKIEIEDEAALRQTGLLLTVDSSVDEAYMEALQSIRIHRDIQDSPLRIVYSPLHGTGR RPVMEGLKAYGFEHVTIVEEQAEPDGAFPTVSYPNPEEKAAFKLAMEYGDRVEADLLMATDPDADRVGLTVRGRDGEWFV LTGNQTGALLMEYILSQKSETGTLPSNGFVAKTIVTSELGAAIAKAYGVHLENTLTGFKFIGEKIKQYEESGEYEFLFGY EESYGYLIGDFCRDKDAVQACLLAAEMAAYHKQHGRTLYDALQSIYEKYGFYEESLQSMTLKGKAGLEQIGRMMEAFRAN PPKEVGGYEVVRFEDYKKQVATDLQSGKSETIELPSSNVLKFVFADGSWFCLRPSGTEPKIKFYFSVHADRAEKTTAKRE SIEADVMKQAKAID
Specific function: Catalyzes the interconversion between glucose-6- phosphate and alpha-glucose-1-phosphate. This is the first step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=560, Percent_Identity=33.75, Blast_Score=305, Evalue=5e-83, Organism=Homo sapiens, GI31377548, Length=573, Percent_Identity=30.8900523560209, Blast_Score=263, Evalue=4e-70, Organism=Homo sapiens, GI21361621, Length=564, Percent_Identity=26.5957446808511, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI290463102, Length=518, Percent_Identity=26.4478764478764, Blast_Score=79, Evalue=1e-14, Organism=Escherichia coli, GI1786904, Length=590, Percent_Identity=25.9322033898305, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1788361, Length=483, Percent_Identity=24.0165631469979, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1789566, Length=456, Percent_Identity=25.4385964912281, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71993870, Length=565, Percent_Identity=32.7433628318584, Blast_Score=261, Evalue=5e-70, Organism=Caenorhabditis elegans, GI71993878, Length=297, Percent_Identity=34.3434343434343, Blast_Score=157, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6323934, Length=583, Percent_Identity=30.7032590051458, Blast_Score=214, Evalue=4e-56, Organism=Drosophila melanogaster, GI20129809, Length=549, Percent_Identity=30.6010928961749, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI24651977, Length=518, Percent_Identity=29.7297297297297, Blast_Score=219, Evalue=6e-57, Organism=Drosophila melanogaster, GI24653722, Length=540, Percent_Identity=30.1851851851852, Blast_Score=216, Evalue=4e-56, Organism=Drosophila melanogaster, GI17864244, Length=532, Percent_Identity=24.4360902255639, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 64034; Mature: 63902
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWQQTYDRWNQFEGLEPHLRVELEELAKDETTLEDAFYKTLEFGTGGMRGEIGPGANRM CCCHHHHHHHHHCCCCCCHHEEEHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCE NVYTIRKASQGFADFISASGEEAKRHGVVIAHDSRHFSPEFALEAARTLASNGIKTYLFP EEEEEECCCCCHHHHHHCCCCHHHHCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECC SLRATPELSFAVRHLNAFGGIVITASHNPPEYNGFKVYGADGGQLPPAEADELVTYVNAI CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHH EDELKIEIEDEAALRQTGLLLTVDSSVDEAYMEALQSIRIHRDIQDSPLRIVYSPLHGTG CCCEEEEECCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC RRPVMEGLKAYGFEHVTIVEEQAEPDGAFPTVSYPNPEEKAAFKLAMEYGDRVEADLLMA CCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE TDPDADRVGLTVRGRDGEWFVLTGNQTGALLMEYILSQKSETGTLPSNGFVAKTIVTSEL CCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHH GAAIAKAYGVHLENTLTGFKFIGEKIKQYEESGEYEFLFGYEESYGYLIGDFCRDKDAVQ HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEHHHHCCHHHHH ACLLAAEMAAYHKQHGRTLYDALQSIYEKYGFYEESLQSMTLKGKAGLEQIGRMMEAFRA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHEECCCCCCHHHHHHHHHHHHC NPPKEVGGYEVVRFEDYKKQVATDLQSGKSETIELPSSNVLKFVFADGSWFCLRPSGTEP CCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEECCCEEEECCCCCCC KIKFYFSVHADRAEKTTAKRESIEADVMKQAKAID EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TWQQTYDRWNQFEGLEPHLRVELEELAKDETTLEDAFYKTLEFGTGGMRGEIGPGANRM CCHHHHHHHHHCCCCCCHHEEEHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCE NVYTIRKASQGFADFISASGEEAKRHGVVIAHDSRHFSPEFALEAARTLASNGIKTYLFP EEEEEECCCCCHHHHHHCCCCHHHHCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECC SLRATPELSFAVRHLNAFGGIVITASHNPPEYNGFKVYGADGGQLPPAEADELVTYVNAI CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHH EDELKIEIEDEAALRQTGLLLTVDSSVDEAYMEALQSIRIHRDIQDSPLRIVYSPLHGTG CCCEEEEECCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC RRPVMEGLKAYGFEHVTIVEEQAEPDGAFPTVSYPNPEEKAAFKLAMEYGDRVEADLLMA CCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE TDPDADRVGLTVRGRDGEWFVLTGNQTGALLMEYILSQKSETGTLPSNGFVAKTIVTSEL CCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHH GAAIAKAYGVHLENTLTGFKFIGEKIKQYEESGEYEFLFGYEESYGYLIGDFCRDKDAVQ HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEHHHHCCHHHHH ACLLAAEMAAYHKQHGRTLYDALQSIYEKYGFYEESLQSMTLKGKAGLEQIGRMMEAFRA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHEECCCCCCHHHHHHHHHHHHC NPPKEVGGYEVVRFEDYKKQVATDLQSGKSETIELPSSNVLKFVFADGSWFCLRPSGTEP CCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEECCCEEEECCCCCCC KIKFYFSVHADRAEKTTAKRESIEADVMKQAKAID EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 2127799 [H]