| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is glgP [H]
Identifier: 229918156
GI number: 229918156
Start: 2392517
End: 2394949
Strand: Direct
Name: glgP [H]
Synonym: EAT1b_2436
Alternate gene names: 229918156
Gene position: 2392517-2394949 (Clockwise)
Preceding gene: 229918155
Following gene: 229918158
Centisome position: 79.75
GC content: 47.51
Gene sequence:
>2433_bases ATGTTCACAGATAAACAAAGCTTTGTCGACGCATTTAAAGAACGGTTCATCGCATTGAACGGGAAGTCGATCGAGGATGG GACAGAGCAGGAAGTGTATCAAACATTGGCAACGATGGTACGCGAGCAGGCCATGCCCAAATGGATTCACACGCGTGACC GTCAAGAAGAAAAACACAGTAAGCAAGTCATCTACTTCTCGTTAGAATTTTTATTAGGTCGCTTCTTATACAACAACTTG CTCAGTTTGGACGTATTGGAGCTCGTTAGAGACGGACTACAAGATCTCGGATACGACTTCACGGACATCACCGAGTTGGA ACCGGAGCCGGGTCTTGGGAACGGAGGGCTCGGGCGTCTGGCCGCCTGTTTCCTCGATTCGTTGGCCGCACTCAGTTTAC CTGGGCATGGAAACGGGATCCGCTATCGATATGGACTATTCAAACAGAAAATTGTAGACGGGTATCAGGTCGAGTTGCCG GATAACTGGCTCCGTGATGGAAACATGTGGGAAACGAGACGTCAGGACAAAGCGGTCGAAATCAATTTCGGTGGCTGGAT TGAGATGAAACAAATCGGAGATCGATTACGTGTCGTCCATCACCCGGATGAGGTTGTGCTTGCCGTTCCGTATGATATGC CGATTATCGGTTATCAAAATGATGTCGTGAATACGTTACGTCTTTGGAATGCCGAATCACCACTTGACGACGAGGCGTAT TTAGAGAAGACGAAAGGGACGTATAAAGACTTGTTGAAACATAAACAGTCGATCGCGACCATTTCGGAATTCTTGTATCC AGATGATACGACGTATGAAGGAAAAGTATTACGTTTGAAACAACAATACTTTTTTGTATCGGCAGGCATTCAATCGATGC TTGCTTCCTATTTGAAGCGAAATAAATCACTTAAGCAGTTAGGCGACCATTACGCGATTCATATCAATGATACGCATCCG GTCGTCGCAATTCCTGAATTGATGCGCATCTTGATGGATGAGCATGGATACGGTTGGGACGAGGCGTGGCGGATTACGAA GAGCGTCATGTCGTTCACGAACCATACGCTACTCGCAGAAGCGCTTGAGAAATGGCCGGTCGAGATGTACCAACGCCTCC TGCCGCGCGTGTATCAAATCATCGAAGAAATCAATCGACGTTTCTGTCGAGACGTACTCGTCAACTATCCGCATCTCGAA TCCCATATGGGAGAGATTGCAATTGTGTCAAACGAACAGATCAATATGGCCAATCTCGCTGTCGTCGGTTCTCATTCTAC GAACGGCGTAGCGCAAATTCATACGGATATTTTAAAACAGCGCGAGATGCGTTACTTATATGAGATGTTCCCGCTTCGCT TCAACAACAAGACGAACGGGATCACTCACCGCCGCTGGCTTTTGAAGTCGAACCCGCGACTATCTGATGCCATCACGGAA GCAATCGGACCGTCATGGGTGGAACATCCGAACGACTTGGAGAAGTTGATGGATGTCTCGAAAGACCGGAGTTTCCAAGA AAGAGTCATGGACGTGAAGCAACAAAACAAATTGGACTTAGCGGCATACATTCAAGAAGAAACGGGAGAGAAAGTGGACC CGCACTCGATCTTTGATGTACAAGTCAAACGCTTGCATGCTTATAAACGACAATTGCTGAATGCCCTTCACATCCATGCG CTTTACTTGAAGATTCAAGCAGACCCGACGTTTACGATGGTGCCTCGCACGTTTATTTTCGGCGCCAAGGCGGCACCGGG ATACTACTATGCGAAAGAGATTATTCGCTATATCAATGCCCTTGCCACATTGATCAACAAGGACAAGCGGGCGAGTCAAT TCATTAAAGTCATCTTCCTTGAAAACTATCGTGTCTCTATGGCCGAACGGATTTTCCCAGGGTCTGACTTGAGCGAACAA ATCTCGACTGCGAGCTATGAAGCATCCGGTACCGGAAACATGAAATTCATGATGAACGGAGCCTTGACGATTGGAACATT AGACGGGGCCAACATCGAGATTCGTGACGCCGTCGGTGATGATCACATCTTCATCTTCGGATTATCTCCGCAAGAAGTCA TGAACTATAAGAAGTTCGGGGGCTATCATGCGGCAGAGATGTATCACGCACATCAGGAAATCAAAGATGTCGTCGATGGT CTCGTCAACGGAACGTTCGATAAAGTGGGTGAATATCAATTCCAATCCATCTTCGATTCTCTCCTCGTCTACAATGATGA CTTCCTCGTCTTGAAAGACTTTGTCTCGTATATGCGGGCACAGCGACGAGTCGATGAGGTGTTCAGTGACCAGGCGCGTT GGGCTGAAAGCTCCATCGTCAATACGGCGAAGTCAGGAATCTTCTCGAGTGACCGTACCATCACGGAATATGCGAACGCG GTCTGGAATATCAAACCGACGAGCGTAAAATAA
Upstream 100 bases:
>100_bases CATCAGGCGATGACCGCGGACTATAGCTGGAAACAATCCGCCAAGCAATATCGTGAGTTATATCATTTATTCGCATGAGT GGAAGGAGCTAACTTGATTT
Downstream 100 bases:
>100_bases AAAGGATCCACCCTTAGGGGTGGACCTCGTTTTCTGGATAGCTGATCCAATCGGAATAGGATCCCGGATAGAGCCGGACA TCATCTTTCCCGAGAGCGTG
Product: glycogen/starch/alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 810; Mature: 810
Protein sequence:
>810_residues MFTDKQSFVDAFKERFIALNGKSIEDGTEQEVYQTLATMVREQAMPKWIHTRDRQEEKHSKQVIYFSLEFLLGRFLYNNL LSLDVLELVRDGLQDLGYDFTDITELEPEPGLGNGGLGRLAACFLDSLAALSLPGHGNGIRYRYGLFKQKIVDGYQVELP DNWLRDGNMWETRRQDKAVEINFGGWIEMKQIGDRLRVVHHPDEVVLAVPYDMPIIGYQNDVVNTLRLWNAESPLDDEAY LEKTKGTYKDLLKHKQSIATISEFLYPDDTTYEGKVLRLKQQYFFVSAGIQSMLASYLKRNKSLKQLGDHYAIHINDTHP VVAIPELMRILMDEHGYGWDEAWRITKSVMSFTNHTLLAEALEKWPVEMYQRLLPRVYQIIEEINRRFCRDVLVNYPHLE SHMGEIAIVSNEQINMANLAVVGSHSTNGVAQIHTDILKQREMRYLYEMFPLRFNNKTNGITHRRWLLKSNPRLSDAITE AIGPSWVEHPNDLEKLMDVSKDRSFQERVMDVKQQNKLDLAAYIQEETGEKVDPHSIFDVQVKRLHAYKRQLLNALHIHA LYLKIQADPTFTMVPRTFIFGAKAAPGYYYAKEIIRYINALATLINKDKRASQFIKVIFLENYRVSMAERIFPGSDLSEQ ISTASYEASGTGNMKFMMNGALTIGTLDGANIEIRDAVGDDHIFIFGLSPQEVMNYKKFGGYHAAEMYHAHQEIKDVVDG LVNGTFDKVGEYQFQSIFDSLLVYNDDFLVLKDFVSYMRAQRRVDEVFSDQARWAESSIVNTAKSGIFSSDRTITEYANA VWNIKPTSVK
Sequences:
>Translated_810_residues MFTDKQSFVDAFKERFIALNGKSIEDGTEQEVYQTLATMVREQAMPKWIHTRDRQEEKHSKQVIYFSLEFLLGRFLYNNL LSLDVLELVRDGLQDLGYDFTDITELEPEPGLGNGGLGRLAACFLDSLAALSLPGHGNGIRYRYGLFKQKIVDGYQVELP DNWLRDGNMWETRRQDKAVEINFGGWIEMKQIGDRLRVVHHPDEVVLAVPYDMPIIGYQNDVVNTLRLWNAESPLDDEAY LEKTKGTYKDLLKHKQSIATISEFLYPDDTTYEGKVLRLKQQYFFVSAGIQSMLASYLKRNKSLKQLGDHYAIHINDTHP VVAIPELMRILMDEHGYGWDEAWRITKSVMSFTNHTLLAEALEKWPVEMYQRLLPRVYQIIEEINRRFCRDVLVNYPHLE SHMGEIAIVSNEQINMANLAVVGSHSTNGVAQIHTDILKQREMRYLYEMFPLRFNNKTNGITHRRWLLKSNPRLSDAITE AIGPSWVEHPNDLEKLMDVSKDRSFQERVMDVKQQNKLDLAAYIQEETGEKVDPHSIFDVQVKRLHAYKRQLLNALHIHA LYLKIQADPTFTMVPRTFIFGAKAAPGYYYAKEIIRYINALATLINKDKRASQFIKVIFLENYRVSMAERIFPGSDLSEQ ISTASYEASGTGNMKFMMNGALTIGTLDGANIEIRDAVGDDHIFIFGLSPQEVMNYKKFGGYHAAEMYHAHQEIKDVVDG LVNGTFDKVGEYQFQSIFDSLLVYNDDFLVLKDFVSYMRAQRRVDEVFSDQARWAESSIVNTAKSGIFSSDRTITEYANA VWNIKPTSVK >Mature_810_residues MFTDKQSFVDAFKERFIALNGKSIEDGTEQEVYQTLATMVREQAMPKWIHTRDRQEEKHSKQVIYFSLEFLLGRFLYNNL LSLDVLELVRDGLQDLGYDFTDITELEPEPGLGNGGLGRLAACFLDSLAALSLPGHGNGIRYRYGLFKQKIVDGYQVELP DNWLRDGNMWETRRQDKAVEINFGGWIEMKQIGDRLRVVHHPDEVVLAVPYDMPIIGYQNDVVNTLRLWNAESPLDDEAY LEKTKGTYKDLLKHKQSIATISEFLYPDDTTYEGKVLRLKQQYFFVSAGIQSMLASYLKRNKSLKQLGDHYAIHINDTHP VVAIPELMRILMDEHGYGWDEAWRITKSVMSFTNHTLLAEALEKWPVEMYQRLLPRVYQIIEEINRRFCRDVLVNYPHLE SHMGEIAIVSNEQINMANLAVVGSHSTNGVAQIHTDILKQREMRYLYEMFPLRFNNKTNGITHRRWLLKSNPRLSDAITE AIGPSWVEHPNDLEKLMDVSKDRSFQERVMDVKQQNKLDLAAYIQEETGEKVDPHSIFDVQVKRLHAYKRQLLNALHIHA LYLKIQADPTFTMVPRTFIFGAKAAPGYYYAKEIIRYINALATLINKDKRASQFIKVIFLENYRVSMAERIFPGSDLSEQ ISTASYEASGTGNMKFMMNGALTIGTLDGANIEIRDAVGDDHIFIFGLSPQEVMNYKKFGGYHAAEMYHAHQEIKDVVDG LVNGTFDKVGEYQFQSIFDSLLVYNDDFLVLKDFVSYMRAQRRVDEVFSDQARWAESSIVNTAKSGIFSSDRTITEYANA VWNIKPTSVK
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI21361370, Length=803, Percent_Identity=44.7073474470735, Blast_Score=661, Evalue=0.0, Organism=Homo sapiens, GI71037379, Length=795, Percent_Identity=44.9056603773585, Blast_Score=657, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=793, Percent_Identity=44.3883984867591, Blast_Score=651, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=701, Percent_Identity=45.6490727532097, Blast_Score=624, Evalue=1e-179, Organism=Homo sapiens, GI257900462, Length=671, Percent_Identity=44.2622950819672, Blast_Score=575, Evalue=1e-164, Organism=Escherichia coli, GI2367228, Length=777, Percent_Identity=45.3024453024453, Blast_Score=650, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=818, Percent_Identity=40.9535452322738, Blast_Score=623, Evalue=1e-179, Organism=Caenorhabditis elegans, GI17564550, Length=793, Percent_Identity=46.1538461538462, Blast_Score=684, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=793, Percent_Identity=46.1538461538462, Blast_Score=684, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=847, Percent_Identity=38.6068476977568, Blast_Score=570, Evalue=1e-163, Organism=Drosophila melanogaster, GI78706832, Length=799, Percent_Identity=47.8097622027534, Blast_Score=699, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=799, Percent_Identity=47.8097622027534, Blast_Score=699, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 93239; Mature: 93239
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTDKQSFVDAFKERFIALNGKSIEDGTEQEVYQTLATMVREQAMPKWIHTRDRQEEKHS CCCCHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHC KQVIYFSLEFLLGRFLYNNLLSLDVLELVRDGLQDLGYDFTDITELEPEPGLGNGGLGRL CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH AACFLDSLAALSLPGHGNGIRYRYGLFKQKIVDGYQVELPDNWLRDGNMWETRRQDKAVE HHHHHHHHHHEECCCCCCCEEEHHHHHHHHHCCCEEEECCHHHCCCCCCCHHHCCCCEEE INFGGWIEMKQIGDRLRVVHHPDEVVLAVPYDMPIIGYQNDVVNTLRLWNAESPLDDEAY EECCCEEEHHHHHHHHEEEECCCCEEEECCCCCCEECCCHHHHHHHHHCCCCCCCCCHHH LEKTKGTYKDLLKHKQSIATISEFLYPDDTTYEGKVLRLKQQYFFVSAGIQSMLASYLKR HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHC NKSLKQLGDHYAIHINDTHPVVAIPELMRILMDEHGYGWDEAWRITKSVMSFTNHTLLAE CCCHHHCCCEEEEEECCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ALEKWPVEMYQRLLPRVYQIIEEINRRFCRDVLVNYPHLESHMGEIAIVSNEQINMANLA HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEECCCCCEEEEE VVGSHSTNGVAQIHTDILKQREMRYLYEMFPLRFNNKTNGITHRRWLLKSNPRLSDAITE EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHEEHCCCCCCHHHHHHH AIGPSWVEHPNDLEKLMDVSKDRSFQERVMDVKQQNKLDLAAYIQEETGEKVDPHSIFDV HCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHH QVKRLHAYKRQLLNALHIHALYLKIQADPTFTMVPRTFIFGAKAAPGYYYAKEIIRYINA HHHHHHHHHHHHHHHHHEEEEEEEEECCCCEEECCHHHEECCCCCCCHHHHHHHHHHHHH LATLINKDKRASQFIKVIFLENYRVSMAERIFPGSDLSEQISTASYEASGTGNMKFMMNG HHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCEEEEEEC ALTIGTLDGANIEIRDAVGDDHIFIFGLSPQEVMNYKKFGGYHAAEMYHAHQEIKDVVDG CEEEEECCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LVNGTFDKVGEYQFQSIFDSLLVYNDDFLVLKDFVSYMRAQRRVDEVFSDQARWAESSIV HHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NTAKSGIFSSDRTITEYANAVWNIKPTSVK HHHHHCCCCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MFTDKQSFVDAFKERFIALNGKSIEDGTEQEVYQTLATMVREQAMPKWIHTRDRQEEKHS CCCCHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHC KQVIYFSLEFLLGRFLYNNLLSLDVLELVRDGLQDLGYDFTDITELEPEPGLGNGGLGRL CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH AACFLDSLAALSLPGHGNGIRYRYGLFKQKIVDGYQVELPDNWLRDGNMWETRRQDKAVE HHHHHHHHHHEECCCCCCCEEEHHHHHHHHHCCCEEEECCHHHCCCCCCCHHHCCCCEEE INFGGWIEMKQIGDRLRVVHHPDEVVLAVPYDMPIIGYQNDVVNTLRLWNAESPLDDEAY EECCCEEEHHHHHHHHEEEECCCCEEEECCCCCCEECCCHHHHHHHHHCCCCCCCCCHHH LEKTKGTYKDLLKHKQSIATISEFLYPDDTTYEGKVLRLKQQYFFVSAGIQSMLASYLKR HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHC NKSLKQLGDHYAIHINDTHPVVAIPELMRILMDEHGYGWDEAWRITKSVMSFTNHTLLAE CCCHHHCCCEEEEEECCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ALEKWPVEMYQRLLPRVYQIIEEINRRFCRDVLVNYPHLESHMGEIAIVSNEQINMANLA HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEECCCCCEEEEE VVGSHSTNGVAQIHTDILKQREMRYLYEMFPLRFNNKTNGITHRRWLLKSNPRLSDAITE EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHEEHCCCCCCHHHHHHH AIGPSWVEHPNDLEKLMDVSKDRSFQERVMDVKQQNKLDLAAYIQEETGEKVDPHSIFDV HCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHH QVKRLHAYKRQLLNALHIHALYLKIQADPTFTMVPRTFIFGAKAAPGYYYAKEIIRYINA HHHHHHHHHHHHHHHHHEEEEEEEEECCCCEEECCHHHEECCCCCCCHHHHHHHHHHHHH LATLINKDKRASQFIKVIFLENYRVSMAERIFPGSDLSEQISTASYEASGTGNMKFMMNG HHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCEEEEEEC ALTIGTLDGANIEIRDAVGDDHIFIFGLSPQEVMNYKKFGGYHAAEMYHAHQEIKDVVDG CEEEEECCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LVNGTFDKVGEYQFQSIFDSLLVYNDDFLVLKDFVSYMRAQRRVDEVFSDQARWAESSIV HHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NTAKSGIFSSDRTITEYANAVWNIKPTSVK HHHHHCCCCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8145641; 9387221; 9384377 [H]