| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is menA [H]
Identifier: 229918096
GI number: 229918096
Start: 2329322
End: 2330221
Strand: Direct
Name: menA [H]
Synonym: EAT1b_2376
Alternate gene names: 229918096
Gene position: 2329322-2330221 (Clockwise)
Preceding gene: 229918089
Following gene: 229918097
Centisome position: 77.65
GC content: 50.0
Gene sequence:
>900_bases ATGAAACAGAAATCGAAAGGGGCATATTGGCGAATGATTCGCCCGCATACCCTGACCGCAAGCTTTATTCCGGTCTTGCT CGGGACGTTCATCGTCCTCGATCAAACCGAACTCAAATGGGGACTTTTTCTCGCCATGCTCGTGGCATCGGTCCTTATTC AAATCGCGACGAACTTATTTAACGAGTATTATGACTACAAGCGTGGTCTTGATCATGAGGGGTCTATCGGGATTGGGGGC TCCATCGTCCGTGACGGATTTACACCACAGCAAGTACTAGCGATTGCACTTGGCATGTATACGGTCGCAGCACTACTCGG GCTCTACATTGCGGCATCTACAAGCTGGCATTTGCTTTGGATTGGCGCGCTGTCTATGCTTGTCGGCTACCTATATACCG GAGGACCGCTCCCGATTGCTTATACGCCGTTCGGTGAAATTGTCGCGGGGTTATTCATGGGATATGTCATCATCGGGATT GCCGGCTTTATCCAAATCAATACGGTGACGACGGAGTTGCTACTCGTGTCGTTCCCGATGGCCTTGTTGATCGGAGCAAT CTTACTTGCGAATAACATCCGTGATTTAGATAACGATAAAGAGAATGGCCGAAAAACGATCGCATGTCTAGTCGGTCATC GACGTGCGGTGTATGTATTGGCAGCGTTCTTTATCGCGGCATTAGTCGGCATCATCGTCGCTGTCATGTTTTATGGCGTC ACTCCATGGGTCTTGCTGTCACTCTTAACGGTGCCGGTCATGATCCGGGCGATTCAACGATTTTGGCAAAAGGCAGAGCC AGCCGCATTGATGCCTGCAATGGCGATGACAGCGAAAGTGAACACGCTGTTCGGAGCATGGATGGTCATCGGACTCATCG TTTCAAGATTTGTGTTGTAA
Upstream 100 bases:
>100_bases GCCTATGAAATGCTCGGGAAATGATCAAGAATCGAGGATAATGGGCTGGCGTTGACAGATTTTTTCATCGAGACGTAAAC TAACGAAGGGAGGGAACGAA
Downstream 100 bases:
>100_bases AAAAGAGGAGGCGTTAACGTGTCAGTCGTAAAAGAAATGCTTGAATTCAATAAACGTTTCGTAGAGGAAAAACAGTACGA ACCGTTCGTATCTGATAAAT
Product: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Products: NA
Alternate protein names: DHNA-octaprenyltransferase [H]
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MKQKSKGAYWRMIRPHTLTASFIPVLLGTFIVLDQTELKWGLFLAMLVASVLIQIATNLFNEYYDYKRGLDHEGSIGIGG SIVRDGFTPQQVLAIALGMYTVAALLGLYIAASTSWHLLWIGALSMLVGYLYTGGPLPIAYTPFGEIVAGLFMGYVIIGI AGFIQINTVTTELLLVSFPMALLIGAILLANNIRDLDNDKENGRKTIACLVGHRRAVYVLAAFFIAALVGIIVAVMFYGV TPWVLLSLLTVPVMIRAIQRFWQKAEPAALMPAMAMTAKVNTLFGAWMVIGLIVSRFVL
Sequences:
>Translated_299_residues MKQKSKGAYWRMIRPHTLTASFIPVLLGTFIVLDQTELKWGLFLAMLVASVLIQIATNLFNEYYDYKRGLDHEGSIGIGG SIVRDGFTPQQVLAIALGMYTVAALLGLYIAASTSWHLLWIGALSMLVGYLYTGGPLPIAYTPFGEIVAGLFMGYVIIGI AGFIQINTVTTELLLVSFPMALLIGAILLANNIRDLDNDKENGRKTIACLVGHRRAVYVLAAFFIAALVGIIVAVMFYGV TPWVLLSLLTVPVMIRAIQRFWQKAEPAALMPAMAMTAKVNTLFGAWMVIGLIVSRFVL >Mature_299_residues MKQKSKGAYWRMIRPHTLTASFIPVLLGTFIVLDQTELKWGLFLAMLVASVLIQIATNLFNEYYDYKRGLDHEGSIGIGG SIVRDGFTPQQVLAIALGMYTVAALLGLYIAASTSWHLLWIGALSMLVGYLYTGGPLPIAYTPFGEIVAGLFMGYVIIGI AGFIQINTVTTELLLVSFPMALLIGAILLANNIRDLDNDKENGRKTIACLVGHRRAVYVLAAFFIAALVGIIVAVMFYGV TPWVLLSLLTVPVMIRAIQRFWQKAEPAALMPAMAMTAKVNTLFGAWMVIGLIVSRFVL
Specific function: Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to dimethylmenaquinone (DMK). Attaches octaprenylpyrophosphate, a membrane-bound 40-carbon side chain to DHNA. The conversion of DHNA to DMK proceeds in three stages:the removal of the carboxyl group of DHNA
COG id: COG1575
COG function: function code H; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the menA family [H]
Homologues:
Organism=Homo sapiens, GI7019551, Length=302, Percent_Identity=30.794701986755, Blast_Score=99, Evalue=5e-21, Organism=Escherichia coli, GI1790365, Length=303, Percent_Identity=27.0627062706271, Blast_Score=107, Evalue=9e-25, Organism=Drosophila melanogaster, GI17737429, Length=304, Percent_Identity=28.2894736842105, Blast_Score=91, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004657 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: =2.5.1.74 [H]
Molecular weight: Translated: 32708; Mature: 32708
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKSKGAYWRMIRPHTLTASFIPVLLGTFIVLDQTELKWGLFLAMLVASVLIQIATNLF CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH NEYYDYKRGLDHEGSIGIGGSIVRDGFTPQQVLAIALGMYTVAALLGLYIAASTSWHLLW HHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH IGALSMLVGYLYTGGPLPIAYTPFGEIVAGLFMGYVIIGIAGFIQINTVTTELLLVSFPM HHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLIGAILLANNIRDLDNDKENGRKTIACLVGHRRAVYVLAAFFIAALVGIIVAVMFYGV HHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC TPWVLLSLLTVPVMIRAIQRFWQKAEPAALMPAMAMTAKVNTLFGAWMVIGLIVSRFVL CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKQKSKGAYWRMIRPHTLTASFIPVLLGTFIVLDQTELKWGLFLAMLVASVLIQIATNLF CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH NEYYDYKRGLDHEGSIGIGGSIVRDGFTPQQVLAIALGMYTVAALLGLYIAASTSWHLLW HHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH IGALSMLVGYLYTGGPLPIAYTPFGEIVAGLFMGYVIIGIAGFIQINTVTTELLLVSFPM HHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLIGAILLANNIRDLDNDKENGRKTIACLVGHRRAVYVLAAFFIAALVGIIVAVMFYGV HHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC TPWVLLSLLTVPVMIRAIQRFWQKAEPAALMPAMAMTAKVNTLFGAWMVIGLIVSRFVL CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]