| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yvdA [H]
Identifier: 229918097
GI number: 229918097
Start: 2330240
End: 2330791
Strand: Direct
Name: yvdA [H]
Synonym: EAT1b_2377
Alternate gene names: 229918097
Gene position: 2330240-2330791 (Clockwise)
Preceding gene: 229918096
Following gene: 229918102
Centisome position: 77.68
GC content: 46.38
Gene sequence:
>552_bases GTGTCAGTCGTAAAAGAAATGCTTGAATTCAATAAACGTTTCGTAGAGGAAAAACAGTACGAACCGTTCGTATCTGATAA ATTTCCAGATAAGAAAATCGTGATTTTGACGTGTATGGATACACGTTTGACGGAACTTTTACCTCAAGCGCTAGGACTTA AGAACGGAGACGCTAAAATCATTAAAAATGCGGGTGCAGTCTTGTCACACCCATTCGGTTCGGCCATGCGCTCCATTTTA GTCGCTCTTTATGCGCTAGGAGCAGAAGAAGTCGTCGTCGTCGGACATTACGATTGTGGAATGGCGGCGATTGAACCGAC TGTCGTCATCGAAGAGATGGAGCGTCGTGGAATCGACCCTCAAACCTTGAAGACGCTAAAGTCGTCAGGGATGGATTTGG AGCAGTGGCTCCATGGTTTTGATTCGGTTGAAGAGAACGTCGTTCATTCTGTCAACCTGATTAACAATCATCCACTGTTG CCACCAGGAACAAATGTACACGGATTCGTGATCGACCCGGCGACGGGACGTCTTGATCCGATCGAAGCATAA
Upstream 100 bases:
>100_bases AATGGCGATGACAGCGAAAGTGAACACGCTGTTCGGAGCATGGATGGTCATCGGACTCATCGTTTCAAGATTTGTGTTGT AAAAAAGAGGAGGCGTTAAC
Downstream 100 bases:
>100_bases GAAAGGAGCGCGTTCAGCTTGAACGTGCTCCTTTTGGGTTATCCGTACGTATTCGTCGGGATGTCGTCATAGTTATCTTC TTCTTGCTTTTGTTTCGCTT
Product: carbonic anhydrase
Products: NA
Alternate protein names: Carbonate dehydratase [H]
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSVVKEMLEFNKRFVEEKQYEPFVSDKFPDKKIVILTCMDTRLTELLPQALGLKNGDAKIIKNAGAVLSHPFGSAMRSIL VALYALGAEEVVVVGHYDCGMAAIEPTVVIEEMERRGIDPQTLKTLKSSGMDLEQWLHGFDSVEENVVHSVNLINNHPLL PPGTNVHGFVIDPATGRLDPIEA
Sequences:
>Translated_183_residues MSVVKEMLEFNKRFVEEKQYEPFVSDKFPDKKIVILTCMDTRLTELLPQALGLKNGDAKIIKNAGAVLSHPFGSAMRSIL VALYALGAEEVVVVGHYDCGMAAIEPTVVIEEMERRGIDPQTLKTLKSSGMDLEQWLHGFDSVEENVVHSVNLINNHPLL PPGTNVHGFVIDPATGRLDPIEA >Mature_182_residues SVVKEMLEFNKRFVEEKQYEPFVSDKFPDKKIVILTCMDTRLTELLPQALGLKNGDAKIIKNAGAVLSHPFGSAMRSILV ALYALGAEEVVVVGHYDCGMAAIEPTVVIEEMERRGIDPQTLKTLKSSGMDLEQWLHGFDSVEENVVHSVNLINNHPLLP PGTNVHGFVIDPATGRLDPIEA
Specific function: Reversible hydration of carbon dioxide [H]
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 20195; Mature: 20063
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVVKEMLEFNKRFVEEKQYEPFVSDKFPDKKIVILTCMDTRLTELLPQALGLKNGDAKI CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHH IKNAGAVLSHPFGSAMRSILVALYALGAEEVVVVGHYDCGMAAIEPTVVIEEMERRGIDP HHHCCHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCHHHHHHHHHHCCCCH QTLKTLKSSGMDLEQWLHGFDSVEENVVHSVNLINNHPLLPPGTNVHGFVIDPATGRLDP HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCC IEA CCC >Mature Secondary Structure SVVKEMLEFNKRFVEEKQYEPFVSDKFPDKKIVILTCMDTRLTELLPQALGLKNGDAKI HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHH IKNAGAVLSHPFGSAMRSILVALYALGAEEVVVVGHYDCGMAAIEPTVVIEEMERRGIDP HHHCCHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCHHHHHHHHHHCCCCH QTLKTLKSSGMDLEQWLHGFDSVEENVVHSVNLINNHPLLPPGTNVHGFVIDPATGRLDP HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCC IEA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]