Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is ycjT [H]

Identifier: 229916999

GI number: 229916999

Start: 1248303

End: 1250660

Strand: Direct

Name: ycjT [H]

Synonym: EAT1b_1273

Alternate gene names: 229916999

Gene position: 1248303-1250660 (Clockwise)

Preceding gene: 229916997

Following gene: 229917000

Centisome position: 41.61

GC content: 42.71

Gene sequence:

>2358_bases
ATGGTGACGAATACATTGATGAACTATACGACTGGCAGAGAAAATCTACAACATTGGCTCGTATCTGAAGACGGGTTTCG
CCCGGAATGGCTCGGGAAAGGTGAATCGGTATTTTCTCTCGGAAATGGATACATGGGGTTACGTTCTGTCACAGAAGAAC
ATTATGCGAATGAAACACGCAACTTGTTCGTGGCGGGGACATTCAATAAGTTCGCTGAGAATGAAGTGACCGAACTTCCG
AATGCAGCAGACCTAATCTGGATGGAGTTCAAATTAGACGGTATCCGTTTTGATTTGACACAGGGCAATATCCTTTCCTA
CCGTCGTACGCTTAATTTGAAAGAAGCTGAGCTCGTACGTGACATCACATGGCAAAGTTCGAATGGCAATGTTTACGACC
TTACTTTTCGACGCTTCGTTTCAATGGATAATCTGCACGTAATTGCTCAACGAGTGACCATAACGCCGAAACAAAACAGT
GTCCTCTCACTTACTTCAGGTATTGATGGACAAACGACAAACAGTGGTGTCCAGCACTTCTTAGAAGGGAACAAACGACT
TTATGACGGACGTTTTATGCAACAGATCCAAACGACGACTGAATCTGGAATCGATTTTGTCTTCCATAGCGTCCATCGTT
TTTACCAACGTGAATCAATGAATCCGACATCCATTATCAAAATGGATCGCCGTCAAATTTTCTTTGACTACTCGGATATT
GAGATTCCAGCGAATGAAGTATTTACGATTGAAAAATACTCGACCGTCTTCACTTCTCGTGATAAAGAGTTGAATGCTGT
TACCACAGAGGAACTCGCAAACCACGCGTTAAATGTGACACGAAACGTTGAATCAAAAGGATACGAGAACTTGTTCATTG
AACATATTCAAGCATGGGATGAACTCGTATGGTCTCGTACACCAATCAATATTAAATCTAAGGAAATGTTTGATCAATTA
GCCATCCGATTTGCTCAATATCATCTTGCTGTTATGACACCGAAACATGACAATCGCATGAACGTTGGAGCAAAAGGCTT
GTCTGGAGAAGGATATAAGGGGCATACATTCTGGGACACAGAAATTTTTATCTTGCCTTACTACACATATACGAACCCAA
AAATTGCTCGCAGTTTGCTCGAGTATCGCTATCTTTCACTACCTGGGGCACATCGGAAAGCCAAAGAGAATGGATACGAT
GGCGCAATGTTCCCATGGGAATCAGCATGGCTCGATGATGGTGAAGTCACGCCAGTCTGGGGTGCCGCAGACATCGTGAC
GGGCGAGGCGACCAAAATTTGGTCCGGTTTTATCGAACAACACATCACCTCAGATGTCGCTTTCGCTGCTTGGCAATATT
ACCACATCACCGGTGACCAAGAATTTATGGACCATTACGGTTATGAACTTTTGATTGATACAGCAAAATTCTGGGCGAGC
CGACTCGAATGGAATGAGTCTGAAAATCGTTATGAAATCAATCAGGTCGTTGGACCAGATGAATATAAGGAACACGTCAA
TAATAACGCGTTTACGAATTATACAGCTCACTGGAATATTCAAAAGGCAATTGAGTATGTAGAACTGTTACGTATTGAAA
AACCGAATCTGTTCGAGCAATTGAACGCTAAGCTTGATTTAGAAACAGCCGAAGCAAGATTCCGACATGTCCTTGACTTA
ATTTATTTGCCACAAGTGCGCGAAGACGGAGTATTGCCACAAGATGATACGTATTTGCAAAAAGAAATCATCGATTTGAG
CAAATACAAAAATCAAGAAAACGTTGGCTCCATGTTCTATGACTATAATCTGGAACAAGTAAACGAGATTCAAGTATCAA
AGCAGGCAGACGTGATGATTTTAATGTATCTGCTTGAAGATTTGTTCTCAGCAGATGTCAAACGAGCAAACTGGGAATAC
TATGAGCCGAAGACATTACACGACTCCTCGCTCTCCCTTTCAACTCATAGCGTCCTTGCATCGGATCTTGGTAACCGCGA
ACTTGCTTACAGCTTATTCCGTCGGGCCTCTGAAATTGATCTTGGACCAAACATGAAAACGTCTGATGCAGGTATTCATG
CGGCTTCACTCGGTGGGATTTGGCAAGCTGTCATAAACGGTTTTGGCGGCGTACGTATGACCAGTGGAAACTTACGAATT
TCTCCAATGTTGCCGGAAGCTTGGGATGAACTCACTTTCTCAATCAATTGGAAAGGTGAAACGCTCGACATTTATGCATC
ACATGACAAAGTTGTACTTACGCGTCGTGCGCCTTCAATTGAGCCACTCACTGTCGAAATTTATGGAGAAAAGCAGACTA
TTACGGAAACATTTACAAGTGAAGTGTTATCAGTATGA

Upstream 100 bases:

>100_bases
CAATTGAAAGAAAATATAGCAAAATCACTATTGAATATCCGAAACGTTTCGGATAGAATGGTGACGAATCAAGAAAGCGC
TTTATCATACAGGAGGTTAT

Downstream 100 bases:

>100_bases
CCTATCGTCCTATCTACCATTTCGCACCAGCTTTTGGATGGATGAACGATCCTAATGGACTTTGTCAGTTCAACGGTGTC
TACCATCTGTTTTATCAGTA

Product: glycoside hydrolase family 65 central catalytic

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 785; Mature: 785

Protein sequence:

>785_residues
MVTNTLMNYTTGRENLQHWLVSEDGFRPEWLGKGESVFSLGNGYMGLRSVTEEHYANETRNLFVAGTFNKFAENEVTELP
NAADLIWMEFKLDGIRFDLTQGNILSYRRTLNLKEAELVRDITWQSSNGNVYDLTFRRFVSMDNLHVIAQRVTITPKQNS
VLSLTSGIDGQTTNSGVQHFLEGNKRLYDGRFMQQIQTTTESGIDFVFHSVHRFYQRESMNPTSIIKMDRRQIFFDYSDI
EIPANEVFTIEKYSTVFTSRDKELNAVTTEELANHALNVTRNVESKGYENLFIEHIQAWDELVWSRTPINIKSKEMFDQL
AIRFAQYHLAVMTPKHDNRMNVGAKGLSGEGYKGHTFWDTEIFILPYYTYTNPKIARSLLEYRYLSLPGAHRKAKENGYD
GAMFPWESAWLDDGEVTPVWGAADIVTGEATKIWSGFIEQHITSDVAFAAWQYYHITGDQEFMDHYGYELLIDTAKFWAS
RLEWNESENRYEINQVVGPDEYKEHVNNNAFTNYTAHWNIQKAIEYVELLRIEKPNLFEQLNAKLDLETAEARFRHVLDL
IYLPQVREDGVLPQDDTYLQKEIIDLSKYKNQENVGSMFYDYNLEQVNEIQVSKQADVMILMYLLEDLFSADVKRANWEY
YEPKTLHDSSLSLSTHSVLASDLGNRELAYSLFRRASEIDLGPNMKTSDAGIHAASLGGIWQAVINGFGGVRMTSGNLRI
SPMLPEAWDELTFSINWKGETLDIYASHDKVVLTRRAPSIEPLTVEIYGEKQTITETFTSEVLSV

Sequences:

>Translated_785_residues
MVTNTLMNYTTGRENLQHWLVSEDGFRPEWLGKGESVFSLGNGYMGLRSVTEEHYANETRNLFVAGTFNKFAENEVTELP
NAADLIWMEFKLDGIRFDLTQGNILSYRRTLNLKEAELVRDITWQSSNGNVYDLTFRRFVSMDNLHVIAQRVTITPKQNS
VLSLTSGIDGQTTNSGVQHFLEGNKRLYDGRFMQQIQTTTESGIDFVFHSVHRFYQRESMNPTSIIKMDRRQIFFDYSDI
EIPANEVFTIEKYSTVFTSRDKELNAVTTEELANHALNVTRNVESKGYENLFIEHIQAWDELVWSRTPINIKSKEMFDQL
AIRFAQYHLAVMTPKHDNRMNVGAKGLSGEGYKGHTFWDTEIFILPYYTYTNPKIARSLLEYRYLSLPGAHRKAKENGYD
GAMFPWESAWLDDGEVTPVWGAADIVTGEATKIWSGFIEQHITSDVAFAAWQYYHITGDQEFMDHYGYELLIDTAKFWAS
RLEWNESENRYEINQVVGPDEYKEHVNNNAFTNYTAHWNIQKAIEYVELLRIEKPNLFEQLNAKLDLETAEARFRHVLDL
IYLPQVREDGVLPQDDTYLQKEIIDLSKYKNQENVGSMFYDYNLEQVNEIQVSKQADVMILMYLLEDLFSADVKRANWEY
YEPKTLHDSSLSLSTHSVLASDLGNRELAYSLFRRASEIDLGPNMKTSDAGIHAASLGGIWQAVINGFGGVRMTSGNLRI
SPMLPEAWDELTFSINWKGETLDIYASHDKVVLTRRAPSIEPLTVEIYGEKQTITETFTSEVLSV
>Mature_785_residues
MVTNTLMNYTTGRENLQHWLVSEDGFRPEWLGKGESVFSLGNGYMGLRSVTEEHYANETRNLFVAGTFNKFAENEVTELP
NAADLIWMEFKLDGIRFDLTQGNILSYRRTLNLKEAELVRDITWQSSNGNVYDLTFRRFVSMDNLHVIAQRVTITPKQNS
VLSLTSGIDGQTTNSGVQHFLEGNKRLYDGRFMQQIQTTTESGIDFVFHSVHRFYQRESMNPTSIIKMDRRQIFFDYSDI
EIPANEVFTIEKYSTVFTSRDKELNAVTTEELANHALNVTRNVESKGYENLFIEHIQAWDELVWSRTPINIKSKEMFDQL
AIRFAQYHLAVMTPKHDNRMNVGAKGLSGEGYKGHTFWDTEIFILPYYTYTNPKIARSLLEYRYLSLPGAHRKAKENGYD
GAMFPWESAWLDDGEVTPVWGAADIVTGEATKIWSGFIEQHITSDVAFAAWQYYHITGDQEFMDHYGYELLIDTAKFWAS
RLEWNESENRYEINQVVGPDEYKEHVNNNAFTNYTAHWNIQKAIEYVELLRIEKPNLFEQLNAKLDLETAEARFRHVLDL
IYLPQVREDGVLPQDDTYLQKEIIDLSKYKNQENVGSMFYDYNLEQVNEIQVSKQADVMILMYLLEDLFSADVKRANWEY
YEPKTLHDSSLSLSTHSVLASDLGNRELAYSLFRRASEIDLGPNMKTSDAGIHAASLGGIWQAVINGFGGVRMTSGNLRI
SPMLPEAWDELTFSINWKGETLDIYASHDKVVLTRRAPSIEPLTVEIYGEKQTITETFTSEVLSV

Specific function: Unknown

COG id: COG1554

COG function: function code G; Trehalose and maltose hydrolases (possible phosphorylases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 65 family [H]

Homologues:

Organism=Homo sapiens, GI187829418, Length=533, Percent_Identity=28.3302063789869, Blast_Score=156, Evalue=7e-38,
Organism=Escherichia coli, GI1787575, Length=757, Percent_Identity=37.3844121532365, Blast_Score=536, Evalue=1e-153,
Organism=Saccharomyces cerevisiae, GI6325283, Length=239, Percent_Identity=30.9623430962343, Blast_Score=104, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24583760, Length=448, Percent_Identity=24.7767857142857, Blast_Score=103, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR011013
- InterPro:   IPR005194
- InterPro:   IPR005195
- InterPro:   IPR005196
- InterPro:   IPR017045 [H]

Pfam domain/function: PF03633 Glyco_hydro_65C; PF03632 Glyco_hydro_65m; PF03636 Glyco_hydro_65N [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 90448; Mature: 90448

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS00063 ALDOKETO_REDUCTASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTNTLMNYTTGRENLQHWLVSEDGFRPEWLGKGESVFSLGNGYMGLRSVTEEHYANETR
CCCCCHHHCCCCHHHHHHHHCCCCCCCCHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCC
NLFVAGTFNKFAENEVTELPNAADLIWMEFKLDGIRFDLTQGNILSYRRTLNLKEAELVR
EEEEEECCHHHHCCHHHHCCCCCCEEEEEEEECCEEEEECCCCEEEHHHHCCCHHHHHHH
DITWQSSNGNVYDLTFRRFVSMDNLHVIAQRVTITPKQNSVLSLTSGIDGQTTNSGVQHF
HHEEECCCCCEEEEEHHHHHCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHH
LEGNKRLYDGRFMQQIQTTTESGIDFVFHSVHRFYQRESMNPTSIIKMDRRQIFFDYSDI
HCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCEEEEECCCC
EIPANEVFTIEKYSTVFTSRDKELNAVTTEELANHALNVTRNVESKGYENLFIEHIQAWD
CCCCCCEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ELVWSRTPINIKSKEMFDQLAIRFAQYHLAVMTPKHDNRMNVGAKGLSGEGYKGHTFWDT
HHHHCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECC
EIFILPYYTYTNPKIARSLLEYRYLSLPGAHRKAKENGYDGAMFPWESAWLDDGEVTPVW
EEEEEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEC
GAADIVTGEATKIWSGFIEQHITSDVAFAAWQYYHITGDQEFMDHYGYELLIDTAKFWAS
CCHHEECCCHHHHHHHHHHHHHHHHHHEEEEEEEEECCCHHHHHHCCEEEEEEHHHHHHH
RLEWNESENRYEINQVVGPDEYKEHVNNNAFTNYTAHWNIQKAIEYVELLRIEKPNLFEQ
HHCCCCCCCCEEEEECCCCHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCHHHH
LNAKLDLETAEARFRHVLDLIYLPQVREDGVLPQDDTYLQKEIIDLSKYKNQENVGSMFY
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEE
DYNLEQVNEIQVSKQADVMILMYLLEDLFSADVKRANWEYYEPKTLHDSSLSLSTHSVLA
ECCHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
SDLGNRELAYSLFRRASEIDLGPNMKTSDAGIHAASLGGIWQAVINGFGGVRMTSGNLRI
HHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCEEE
SPMLPEAWDELTFSINWKGETLDIYASHDKVVLTRRAPSIEPLTVEIYGEKQTITETFTS
ECCCCCCCCCEEEEEEECCCEEEEEECCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHH
EVLSV
HHHCC
>Mature Secondary Structure
MVTNTLMNYTTGRENLQHWLVSEDGFRPEWLGKGESVFSLGNGYMGLRSVTEEHYANETR
CCCCCHHHCCCCHHHHHHHHCCCCCCCCHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCC
NLFVAGTFNKFAENEVTELPNAADLIWMEFKLDGIRFDLTQGNILSYRRTLNLKEAELVR
EEEEEECCHHHHCCHHHHCCCCCCEEEEEEEECCEEEEECCCCEEEHHHHCCCHHHHHHH
DITWQSSNGNVYDLTFRRFVSMDNLHVIAQRVTITPKQNSVLSLTSGIDGQTTNSGVQHF
HHEEECCCCCEEEEEHHHHHCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHH
LEGNKRLYDGRFMQQIQTTTESGIDFVFHSVHRFYQRESMNPTSIIKMDRRQIFFDYSDI
HCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCEEEEECCCC
EIPANEVFTIEKYSTVFTSRDKELNAVTTEELANHALNVTRNVESKGYENLFIEHIQAWD
CCCCCCEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ELVWSRTPINIKSKEMFDQLAIRFAQYHLAVMTPKHDNRMNVGAKGLSGEGYKGHTFWDT
HHHHCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECC
EIFILPYYTYTNPKIARSLLEYRYLSLPGAHRKAKENGYDGAMFPWESAWLDDGEVTPVW
EEEEEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEC
GAADIVTGEATKIWSGFIEQHITSDVAFAAWQYYHITGDQEFMDHYGYELLIDTAKFWAS
CCHHEECCCHHHHHHHHHHHHHHHHHHEEEEEEEEECCCHHHHHHCCEEEEEEHHHHHHH
RLEWNESENRYEINQVVGPDEYKEHVNNNAFTNYTAHWNIQKAIEYVELLRIEKPNLFEQ
HHCCCCCCCCEEEEECCCCHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCHHHH
LNAKLDLETAEARFRHVLDLIYLPQVREDGVLPQDDTYLQKEIIDLSKYKNQENVGSMFY
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEE
DYNLEQVNEIQVSKQADVMILMYLLEDLFSADVKRANWEYYEPKTLHDSSLSLSTHSVLA
ECCHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
SDLGNRELAYSLFRRASEIDLGPNMKTSDAGIHAASLGGIWQAVINGFGGVRMTSGNLRI
HHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCEEE
SPMLPEAWDELTFSINWKGETLDIYASHDKVVLTRRAPSIEPLTVEIYGEKQTITETFTS
ECCCCCCCCCEEEEEEECCCEEEEEECCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHH
EVLSV
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]