Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yjbB [H]

Identifier: 229916150

GI number: 229916150

Start: 383037

End: 384194

Strand: Direct

Name: yjbB [H]

Synonym: EAT1b_0419

Alternate gene names: 229916150

Gene position: 383037-384194 (Clockwise)

Preceding gene: 229916146

Following gene: 229916153

Centisome position: 12.77

GC content: 50.09

Gene sequence:

>1158_bases
ATGAAATCGTTTTACACATTGCTCGTTAGCCAATGGCTCGCAAACACTGGCGATGTCCTATACATCGTCGCGCTCATTGC
CTTGCTGTATCAACAAACTAGGTCCGCTCTCATGGCGGCCAGCTTCCCGATTGCCGTGACTGCCGGTATGACGCTCAGCG
GATTCTTTTTCGCCCGCATCCTCAGTCGCTACTCGCTCGGGAAAACGCTCGTCCTGTCACAACTGATGAAGACGGTCACC
CTTGTTCTCGTTCTCTTCACGGATTCGATTCTTGTTCTCGGACTCGTCCTGTTCATTGCATTCCTCGATGGATTCGCACG
TCCAATTCAAGCGTCGTTCATCCCGAGATTGACGACGAATCGCCAACAAGCGAACAGCCTCGTTCAAGGTTCCAATCAGT
TCATCCAACTCGCGATGTGGCCGCTCGGGACGATGCTCGTCTCTCTCACGTCGAGCGCCATTGCGCTAATCGTGTCACTC
GTTCTCTTCAGCCTTTCGACGATTGTGACGATTTACTTCTATCAATCGCTTACGGAAGACATCGTTGATGACGAAACGGA
TGAATCGATTACCTTACGCGATAGTCTTACTTATGTAAGAACGTCACCATTCGCTCGTCGAGTGACTGGGTTTGTGACGT
ATGAATCATTTGTCAGCACGCTTTGGATTTCAGCGTTGCTTCTCGTCTATCTCGAGCGACATCTGCAAGTCGATCCAGGC
TGGTGGGGAACGCTGAACGCATCATTTTTGATCAGTATGATTGCAGCGAGTGCTTATCTTTATCGGTCTCGTCGAGCGCC
CTCGCTACCGTCGACTGCCGTCTTATCCATTGTTTCCGCTCTGTTGTTCGGCGTGACCGAGCATCTTGCGTTTGCGATTT
TGGCGTTAGTCATTCAAGGCGCAGCTACACAAATCCGCATCATCCAGACGAACACCGTCATTCAAGAACAGATCCCGACT
ACACAACTTCCTTATGTATATAGTGTGCAACAAACGGGATACGCCCTCGCATTCAGTATGGGGAGTTTGCTGTTCGGTCT
TCTTGCGGATGGACTACCGATCGATTCGGTATACCTTCTCGGTGCATTCTTGACCATTCCGTTAATCTGGATTGGGCGAT
TGACCGAACAGTCCATTTTAACCGCATCTTCTGTATAA

Upstream 100 bases:

>100_bases
TTTTGTATAATTATTTTTATATCATTTTATGAAGAGGTGAAAATGTGTAATAACGATACGTCCAACCCACCCAATTGAAT
AGATTCGGAGGAGATTTGTG

Downstream 100 bases:

>100_bases
ACAAGAGGCGCCTTCTCTAAGAGAGGGCGCCTTTACGTGTAGAACTTTCCACTGAAATATACGGTTGGACTCCCCTTTCG
ATTACAATCGAGTGAAATCA

Product: major facilitator superfamily MFS_1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKSFYTLLVSQWLANTGDVLYIVALIALLYQQTRSALMAASFPIAVTAGMTLSGFFFARILSRYSLGKTLVLSQLMKTVT
LVLVLFTDSILVLGLVLFIAFLDGFARPIQASFIPRLTTNRQQANSLVQGSNQFIQLAMWPLGTMLVSLTSSAIALIVSL
VLFSLSTIVTIYFYQSLTEDIVDDETDESITLRDSLTYVRTSPFARRVTGFVTYESFVSTLWISALLLVYLERHLQVDPG
WWGTLNASFLISMIAASAYLYRSRRAPSLPSTAVLSIVSALLFGVTEHLAFAILALVIQGAATQIRIIQTNTVIQEQIPT
TQLPYVYSVQQTGYALAFSMGSLLFGLLADGLPIDSVYLLGAFLTIPLIWIGRLTEQSILTASSV

Sequences:

>Translated_385_residues
MKSFYTLLVSQWLANTGDVLYIVALIALLYQQTRSALMAASFPIAVTAGMTLSGFFFARILSRYSLGKTLVLSQLMKTVT
LVLVLFTDSILVLGLVLFIAFLDGFARPIQASFIPRLTTNRQQANSLVQGSNQFIQLAMWPLGTMLVSLTSSAIALIVSL
VLFSLSTIVTIYFYQSLTEDIVDDETDESITLRDSLTYVRTSPFARRVTGFVTYESFVSTLWISALLLVYLERHLQVDPG
WWGTLNASFLISMIAASAYLYRSRRAPSLPSTAVLSIVSALLFGVTEHLAFAILALVIQGAATQIRIIQTNTVIQEQIPT
TQLPYVYSVQQTGYALAFSMGSLLFGLLADGLPIDSVYLLGAFLTIPLIWIGRLTEQSILTASSV
>Mature_385_residues
MKSFYTLLVSQWLANTGDVLYIVALIALLYQQTRSALMAASFPIAVTAGMTLSGFFFARILSRYSLGKTLVLSQLMKTVT
LVLVLFTDSILVLGLVLFIAFLDGFARPIQASFIPRLTTNRQQANSLVQGSNQFIQLAMWPLGTMLVSLTSSAIALIVSL
VLFSLSTIVTIYFYQSLTEDIVDDETDESITLRDSLTYVRTSPFARRVTGFVTYESFVSTLWISALLLVYLERHLQVDPG
WWGTLNASFLISMIAASAYLYRSRRAPSLPSTAVLSIVSALLFGVTEHLAFAILALVIQGAATQIRIIQTNTVIQEQIPT
TQLPYVYSVQQTGYALAFSMGSLLFGLLADGLPIDSVYLLGAFLTIPLIWIGRLTEQSILTASSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42285; Mature: 42285

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]