Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yqjV [H]

Identifier: 229916030

GI number: 229916030

Start: 266102

End: 267346

Strand: Direct

Name: yqjV [H]

Synonym: EAT1b_0298

Alternate gene names: 229916030

Gene position: 266102-267346 (Clockwise)

Preceding gene: 229916029

Following gene: 229916031

Centisome position: 8.87

GC content: 50.76

Gene sequence:

>1245_bases
ATGTTTCAATCACTCAAGCGGCTCGACCGCAACATTTGGATTCGTTTCTTAGGGGAGACGATTACGGGAATCATGATGTT
CATGATTGCCCCATTCCTTGTTCTCTATTATAGTGACCAGTTAGACAGCTACCTTCAAGTCGGAATCATCATGGCTACTG
GCCCGATCATGGCGCTCCTTGGTTCGATGATCGGAGGACGGCTAGCAGACCTGTATGGTCGAAAACCAATCATGATGATC
GCCATCATCGGGGACGCACTTGCCCTCATCGGATTTGCGTTCGCCGACTCGTTCTGGCCGCTTCTTTTATTGAACGCGAT
GCTCGGACTGACGAACTCGCTCTTCCACCCTGCCGCAAGCGCGATGGTCGCCGATGTCACGGAGCCAGAGCATATGAACG
AAGCATTCGGACTTTTACGGATGGGACATAACATCGGCGCTGCATTCGGTCCACTTCTTGGTAGTGCGGTGCTGTTCATC
GACCGCGAGCTCATCTTCTTTGCGGCGGCATTCGTCTTTGGACTATATGCGATTTCGCTCGGCACGTTCATACATGAGTC
GTTGCCCGAGTTTACGGAAGATGAGACTCCAAGCAACCGGGAAGTGTTGCGCGTCTTTTATAACGATCGCGTGTTTCTCG
TCTTCATCTTTGCGGGTATATTCATATCAATGGGATTCTCCGTCGTCGAGAGCATGCTACCACTCTTTTTAAAAGAATCG
CTCCCGACGTATACCGCACAACAGAACCCATTCCCGTATCTGTTAGCACTGAATGGAATCATGGTTGTCTTTTTCCAGTT
CCCGATTGCTTCAAAACTCGGGAACAAGCCGTTCGGTAAAGTCATGCTGGCCGGAGCAACCGTATTCGGTATCGGTATGA
TCTTGCTTGCGATTGTGCCTAGAGCCTTGTTCGCACTCGATACCCCTTACGTGCCACTCGTCGGGATCTTACTCGCCGTA
TATGCGTTTTATACGTTAGGTGAGATGATCATGTCCCCTGTTCAGCAGACATTCATCGCCTTGATCGCACCGGAGAATAT
GCGTGGTGCCTATAACGGTGCAGCGAGTATCCAATGGCTGATCGGCGGTGTCACGGCACCAATCATCGCAAGTGTCTTTT
TTGACAATCGTGCCGGACACATCGCTTTGATCCTCATCGGTGGAGCGAGTTGTTTATCAGGCATCATCTATTGGCAGCTC
GGACGTCATGTCCAAGCGACGGAAGCAAAGCAAAAGACGGCTTAA

Upstream 100 bases:

>100_bases
CTGCCTATCGAGGCATGCATAAACAACGTGGGACGTCGTATGCCTTCATGCATATGACGTCCCTTTTGTGTCTAAAAATT
AAATAAAGCAGGTGACCTGT

Downstream 100 bases:

>100_bases
CCGCTCATTGACCACACTCTCTGATTTCGGAAGTGTGGTCTTTTCATTCTTTTCATCTTTATTAAAATTTGAAATTATCA
TTCAATTCACTTTACAATCA

Product: major facilitator superfamily MFS_1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MFQSLKRLDRNIWIRFLGETITGIMMFMIAPFLVLYYSDQLDSYLQVGIIMATGPIMALLGSMIGGRLADLYGRKPIMMI
AIIGDALALIGFAFADSFWPLLLLNAMLGLTNSLFHPAASAMVADVTEPEHMNEAFGLLRMGHNIGAAFGPLLGSAVLFI
DRELIFFAAAFVFGLYAISLGTFIHESLPEFTEDETPSNREVLRVFYNDRVFLVFIFAGIFISMGFSVVESMLPLFLKES
LPTYTAQQNPFPYLLALNGIMVVFFQFPIASKLGNKPFGKVMLAGATVFGIGMILLAIVPRALFALDTPYVPLVGILLAV
YAFYTLGEMIMSPVQQTFIALIAPENMRGAYNGAASIQWLIGGVTAPIIASVFFDNRAGHIALILIGGASCLSGIIYWQL
GRHVQATEAKQKTA

Sequences:

>Translated_414_residues
MFQSLKRLDRNIWIRFLGETITGIMMFMIAPFLVLYYSDQLDSYLQVGIIMATGPIMALLGSMIGGRLADLYGRKPIMMI
AIIGDALALIGFAFADSFWPLLLLNAMLGLTNSLFHPAASAMVADVTEPEHMNEAFGLLRMGHNIGAAFGPLLGSAVLFI
DRELIFFAAAFVFGLYAISLGTFIHESLPEFTEDETPSNREVLRVFYNDRVFLVFIFAGIFISMGFSVVESMLPLFLKES
LPTYTAQQNPFPYLLALNGIMVVFFQFPIASKLGNKPFGKVMLAGATVFGIGMILLAIVPRALFALDTPYVPLVGILLAV
YAFYTLGEMIMSPVQQTFIALIAPENMRGAYNGAASIQWLIGGVTAPIIASVFFDNRAGHIALILIGGASCLSGIIYWQL
GRHVQATEAKQKTA
>Mature_414_residues
MFQSLKRLDRNIWIRFLGETITGIMMFMIAPFLVLYYSDQLDSYLQVGIIMATGPIMALLGSMIGGRLADLYGRKPIMMI
AIIGDALALIGFAFADSFWPLLLLNAMLGLTNSLFHPAASAMVADVTEPEHMNEAFGLLRMGHNIGAAFGPLLGSAVLFI
DRELIFFAAAFVFGLYAISLGTFIHESLPEFTEDETPSNREVLRVFYNDRVFLVFIFAGIFISMGFSVVESMLPLFLKES
LPTYTAQQNPFPYLLALNGIMVVFFQFPIASKLGNKPFGKVMLAGATVFGIGMILLAIVPRALFALDTPYVPLVGILLAV
YAFYTLGEMIMSPVQQTFIALIAPENMRGAYNGAASIQWLIGGVTAPIIASVFFDNRAGHIALILIGGASCLSGIIYWQL
GRHVQATEAKQKTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

Organism=Escherichia coli, GI87081828, Length=335, Percent_Identity=26.2686567164179, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1787815, Length=346, Percent_Identity=25.1445086705202, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829
- InterPro:   IPR001958 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45251; Mature: 45251

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQSLKRLDRNIWIRFLGETITGIMMFMIAPFLVLYYSDQLDSYLQVGIIMATGPIMALL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
GSMIGGRLADLYGRKPIMMIAIIGDALALIGFAFADSFWPLLLLNAMLGLTNSLFHPAAS
HHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMVADVTEPEHMNEAFGLLRMGHNIGAAFGPLLGSAVLFIDRELIFFAAAFVFGLYAISL
HHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTFIHESLPEFTEDETPSNREVLRVFYNDRVFLVFIFAGIFISMGFSVVESMLPLFLKES
HHHHHHHCCHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPTYTAQQNPFPYLLALNGIMVVFFQFPIASKLGNKPFGKVMLAGATVFGIGMILLAIVP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
RALFALDTPYVPLVGILLAVYAFYTLGEMIMSPVQQTFIALIAPENMRGAYNGAASIQWL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
IGGVTAPIIASVFFDNRAGHIALILIGGASCLSGIIYWQLGRHVQATEAKQKTA
HHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHCCCHHHHHHHHCCC
>Mature Secondary Structure
MFQSLKRLDRNIWIRFLGETITGIMMFMIAPFLVLYYSDQLDSYLQVGIIMATGPIMALL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
GSMIGGRLADLYGRKPIMMIAIIGDALALIGFAFADSFWPLLLLNAMLGLTNSLFHPAAS
HHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMVADVTEPEHMNEAFGLLRMGHNIGAAFGPLLGSAVLFIDRELIFFAAAFVFGLYAISL
HHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTFIHESLPEFTEDETPSNREVLRVFYNDRVFLVFIFAGIFISMGFSVVESMLPLFLKES
HHHHHHHCCHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPTYTAQQNPFPYLLALNGIMVVFFQFPIASKLGNKPFGKVMLAGATVFGIGMILLAIVP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
RALFALDTPYVPLVGILLAVYAFYTLGEMIMSPVQQTFIALIAPENMRGAYNGAASIQWL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
IGGVTAPIIASVFFDNRAGHIALILIGGASCLSGIIYWQLGRHVQATEAKQKTA
HHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]