| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is dcm [C]
Identifier: 227828127
GI number: 227828127
Start: 1712097
End: 1713074
Strand: Direct
Name: dcm [C]
Synonym: M1425_1865
Alternate gene names: 227828127
Gene position: 1712097-1713074 (Clockwise)
Preceding gene: 227828126
Following gene: 227828128
Centisome position: 65.63
GC content: 33.44
Gene sequence:
>978_bases TTGGGGCAAATAAAAGTCATTGATCTATTTTCTGGAGCAGGAGGATTTTCATTAGGTTTCAAAAAATTAGGAATAGAGCC TAAATTAGCAATAGATATAAATCACGCTGCAGCTAGAACATATTCATTAAATTTTCCAAATACAATAGTAATTGAAGACG ATATAAGACAAATAAGTGGAAAAGAGATTTTAAAAAATGTAGGGGATGAAATAGACGTAATAATTGGAGGCCCTCCATGT GAGGGATATACTGCAGCTAATCCCTTACGTATGCAAGATCCTTTAGATAGATTATATTTAGATCAAAGAGGGAGTTTAAC ACTGGAATTCATAAGGATTGTGGATGAACTAAAACCGAAAATCTTTGTAATGGAAAATGTTCCAGCGATTATTGAAACTC AATCACTAAGAGATGCTCTAATTAATGAATTTAAAAGAGCTGGATACAATAATATATTCTTCAATATATTACATGCTGAA GATTATGGTAACCCATCTAAACGAAATAGGGTATTCATCTCAAACGTTAAAATATTGCCTATTAAAATTCAAAAAAGAGT CACAGTTTATGATGCGATTCATGATTTAGATAGCAAACTAGACGTTCCTAATAACGAGGTAAGCGAGCCTAACGAGAAAA AACTTCTGAAAATTTCTAAAATTGGGTACGGAGAGTATTTAACAATGTACAAGGCGAGTAAGGGAAAAAGTATGCCACTA TATATTAGACTTTCTCCATTCGATCTAGCACCTACAATTTTGGGTAATTCTAGATTTATACACCCATTCCATGATAGATT CTTAACTGTGAGAGAGCAGGCCAGACTAATGAGTTATCCTGATGATCATGTATTTTTAGGAAGCAAAGATGAACAGTATA ATCAAGTAGGCGAATCTGTTCCAGTAGCCTTATCTACCGCTATAGCTAAAGAGATTCTGGGTATACTAAATGAAAGAGTT ATATTTCGGCCTACATAA
Upstream 100 bases:
>100_bases TGTGGATCTCAACTAACCTACTATGATACGGAAAAGATTAAGTCATTCTTGGAGCAAAAAATAAGACAAATAGAGGAAGA GATAGATAAGGAGACAAAAC
Downstream 100 bases:
>100_bases CCTAACTAGTAATCAAAGACTCTTGGACTTTTCTAAATTAGCCTTTAATATAAAGTACGTAAAGTATTTAGTTCTCACTA AGTTAGGTGGGACAGCTGCG
Product: DNA-cytosine methyltransferase
Products: NA
Alternate protein names: Cytosine-specific methyltransferase MJ1200; M.MjaVIIP [H]
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MGQIKVIDLFSGAGGFSLGFKKLGIEPKLAIDINHAAARTYSLNFPNTIVIEDDIRQISGKEILKNVGDEIDVIIGGPPC EGYTAANPLRMQDPLDRLYLDQRGSLTLEFIRIVDELKPKIFVMENVPAIIETQSLRDALINEFKRAGYNNIFFNILHAE DYGNPSKRNRVFISNVKILPIKIQKRVTVYDAIHDLDSKLDVPNNEVSEPNEKKLLKISKIGYGEYLTMYKASKGKSMPL YIRLSPFDLAPTILGNSRFIHPFHDRFLTVREQARLMSYPDDHVFLGSKDEQYNQVGESVPVALSTAIAKEILGILNERV IFRPT
Sequences:
>Translated_325_residues MGQIKVIDLFSGAGGFSLGFKKLGIEPKLAIDINHAAARTYSLNFPNTIVIEDDIRQISGKEILKNVGDEIDVIIGGPPC EGYTAANPLRMQDPLDRLYLDQRGSLTLEFIRIVDELKPKIFVMENVPAIIETQSLRDALINEFKRAGYNNIFFNILHAE DYGNPSKRNRVFISNVKILPIKIQKRVTVYDAIHDLDSKLDVPNNEVSEPNEKKLLKISKIGYGEYLTMYKASKGKSMPL YIRLSPFDLAPTILGNSRFIHPFHDRFLTVREQARLMSYPDDHVFLGSKDEQYNQVGESVPVALSTAIAKEILGILNERV IFRPT >Mature_324_residues GQIKVIDLFSGAGGFSLGFKKLGIEPKLAIDINHAAARTYSLNFPNTIVIEDDIRQISGKEILKNVGDEIDVIIGGPPCE GYTAANPLRMQDPLDRLYLDQRGSLTLEFIRIVDELKPKIFVMENVPAIIETQSLRDALINEFKRAGYNNIFFNILHAED YGNPSKRNRVFISNVKILPIKIQKRVTVYDAIHDLDSKLDVPNNEVSEPNEKKLLKISKIGYGEYLTMYKASKGKSMPLY IRLSPFDLAPTILGNSRFIHPFHDRFLTVREQARLMSYPDDHVFLGSKDEQYNQVGESVPVALSTAIAKEILGILNERVI FRPT
Specific function: This Methylase Recognizes The Double-Stranded Sequence Ccwgg, Causes Specific Methylation On C-2 On Both Strands. [C]
COG id: COG0270
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C5-methyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI195927037, Length=187, Percent_Identity=28.3422459893048, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI4503351, Length=187, Percent_Identity=28.3422459893048, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI4758184, Length=225, Percent_Identity=28.8888888888889, Blast_Score=69, Evalue=6e-12, Organism=Escherichia coli, GI1788271, Length=226, Percent_Identity=26.9911504424779, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001525 [H]
Pfam domain/function: PF00145 DNA_methylase [H]
EC number: =2.1.1.37 [H]
Molecular weight: Translated: 36679; Mature: 36548
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQIKVIDLFSGAGGFSLGFKKLGIEPKLAIDINHAAARTYSLNFPNTIVIEDDIRQISG CCCEEEEEEECCCCCCCCCHHHCCCCCEEEEEECCCEEEEEECCCCCEEEECHHHHHCCH KEILKNVGDEIDVIIGGPPCEGYTAANPLRMQDPLDRLYLDQRGSLTLEFIRIVDELKPK HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCC IFVMENVPAIIETQSLRDALINEFKRAGYNNIFFNILHAEDYGNPSKRNRVFISNVKILP EEEEECCCCEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEECEEEEE IKIQKRVTVYDAIHDLDSKLDVPNNEVSEPNEKKLLKISKIGYGEYLTMYKASKGKSMPL EEEECEEEHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEECCCCCEEEEEECCCCCCCEE YIRLSPFDLAPTILGNSRFIHPFHDRFLTVREQARLMSYPDDHVFLGSKDEQYNQVGESV EEEECCCCCCHHEECCCCEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCC PVALSTAIAKEILGILNERVIFRPT CHHHHHHHHHHHHHHHCCCEEEECC >Mature Secondary Structure GQIKVIDLFSGAGGFSLGFKKLGIEPKLAIDINHAAARTYSLNFPNTIVIEDDIRQISG CCEEEEEEECCCCCCCCCHHHCCCCCEEEEEECCCEEEEEECCCCCEEEECHHHHHCCH KEILKNVGDEIDVIIGGPPCEGYTAANPLRMQDPLDRLYLDQRGSLTLEFIRIVDELKPK HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCC IFVMENVPAIIETQSLRDALINEFKRAGYNNIFFNILHAEDYGNPSKRNRVFISNVKILP EEEEECCCCEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEECEEEEE IKIQKRVTVYDAIHDLDSKLDVPNNEVSEPNEKKLLKISKIGYGEYLTMYKASKGKSMPL EEEECEEEHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEECCCCCEEEEEECCCCCCCEE YIRLSPFDLAPTILGNSRFIHPFHDRFLTVREQARLMSYPDDHVFLGSKDEQYNQVGESV EEEECCCCCCHHEECCCCEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCC PVALSTAIAKEILGILNERVIFRPT CHHHHHHHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]