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The map label for this gene is 227828128

Identifier: 227828128

GI number: 227828128

Start: 1713046

End: 1713510

Strand: Direct

Name: 227828128

Synonym: M1425_1866

Alternate gene names: NA

Gene position: 1713046-1713510 (Clockwise)

Preceding gene: 227828127

Following gene: 227828136

Centisome position: 65.66

GC content: 31.18

Gene sequence:

>465_bases
ATGAAAGAGTTATATTTCGGCCTACATAACCTAACTAGTAATCAAAGACTCTTGGACTTTTCTAAATTAGCCTTTAATAT
AAAGTACGTAAAGTATTTAGTTCTCACTAAGTTAGGTGGGACAGCTGCGCAATCTGGAGTTCCAGAAGTTAGTAAACTAG
CATTTAAATATAATAAGCCTATTTTGGTACTGCCAGAACTAAAGGACGCTATAGATCTATTAAAACCAGAAATTACACTC
CTAGTATCACAGAATGCTGAAAAACAAATTGATTTTAATAATCTTATGAAATATGATAAAATATTGATAATATTTTCTGG
AATAGAAGGGAGTGGTTTTAACAAAATAGAACAATCTCTAGGGGAGTATGTAAGAATAGTAGAAGATGCTCAAGATTTAG
GAGCCGTAAGTTTGGCATCCTTCTTTTTATGTAAGTATTTACAATTAGTAGAAGGTAAAGTTTAA

Upstream 100 bases:

>100_bases
GTATTTTTAGGAAGCAAAGATGAACAGTATAATCAAGTAGGCGAATCTGTTCCAGTAGCCTTATCTACCGCTATAGCTAA
AGAGATTCTGGGTATACTAA

Downstream 100 bases:

>100_bases
AAGAGAAAACAATAACCTAGTATTAAGGGCCCGTCGTCTAGCCTGGTTAGGACGTCGCCCTGACACGGCGGAGGTCCTGG
GTTCAAATCCCAGCGGGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKELYFGLHNLTSNQRLLDFSKLAFNIKYVKYLVLTKLGGTAAQSGVPEVSKLAFKYNKPILVLPELKDAIDLLKPEITL
LVSQNAEKQIDFNNLMKYDKILIIFSGIEGSGFNKIEQSLGEYVRIVEDAQDLGAVSLASFFLCKYLQLVEGKV

Sequences:

>Translated_154_residues
MKELYFGLHNLTSNQRLLDFSKLAFNIKYVKYLVLTKLGGTAAQSGVPEVSKLAFKYNKPILVLPELKDAIDLLKPEITL
LVSQNAEKQIDFNNLMKYDKILIIFSGIEGSGFNKIEQSLGEYVRIVEDAQDLGAVSLASFFLCKYLQLVEGKV
>Mature_154_residues
MKELYFGLHNLTSNQRLLDFSKLAFNIKYVKYLVLTKLGGTAAQSGVPEVSKLAFKYNKPILVLPELKDAIDLLKPEITL
LVSQNAEKQIDFNNLMKYDKILIIFSGIEGSGFNKIEQSLGEYVRIVEDAQDLGAVSLASFFLCKYLQLVEGKV

Specific function: Unknown

COG id: COG4080

COG function: function code L; RecB-family nuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.pernix APE2001 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018665 [H]

Pfam domain/function: PF09895 DUF2122 [H]

EC number: NA

Molecular weight: Translated: 17296; Mature: 17296

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKELYFGLHNLTSNQRLLDFSKLAFNIKYVKYLVLTKLGGTAAQSGVPEVSKLAFKYNKP
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCCC
ILVLPELKDAIDLLKPEITLLVSQNAEKQIDFNNLMKYDKILIIFSGIEGSGFNKIEQSL
EEEECCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCEEEEEEECCCCCCHHHHHHHH
GEYVRIVEDAQDLGAVSLASFFLCKYLQLVEGKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKELYFGLHNLTSNQRLLDFSKLAFNIKYVKYLVLTKLGGTAAQSGVPEVSKLAFKYNKP
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCCC
ILVLPELKDAIDLLKPEITLLVSQNAEKQIDFNNLMKYDKILIIFSGIEGSGFNKIEQSL
EEEECCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCEEEEEEECCCCCCHHHHHHHH
GEYVRIVEDAQDLGAVSLASFFLCKYLQLVEGKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]