Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

Click here to switch to the map view.

The map label for this gene is 225630851

Identifier: 225630851

GI number: 225630851

Start: 1247573

End: 1248370

Strand: Direct

Name: 225630851

Synonym: WRi_011570

Alternate gene names: NA

Gene position: 1247573-1248370 (Clockwise)

Preceding gene: 225630847

Following gene: 225630852

Centisome position: 86.29

GC content: 34.59

Gene sequence:

>798_bases
ATGGGTAAATGTTGTAAAAATAACACTACTAAACAAGCTGAATCTACTACTAAAAAATTAGTAAGTAACTTTAAGTCATC
GCTTTTGTGTGGAACAAAAGGGTTTTTGACTTTTAGTCTGGCATTTTTAAGTTATTTGGAATATAGTTCACATCATAATA
CAAAATTAAAAGAAGGTGCTGCCTTTGCAATGAAAAGAAACACTATTCCATTTCTTGAAATGACAATCATAGCACCGCTT
GTTTGTTTTGCACTGCCAGCTATGCTAGGCAGTATGAGCCTCATGCAATGCGCACTTTTATGTGCTGCCTTAATGATTGC
CACATGTTTTATTGTCAGAACTTTTCATCTGCGTGAGAAGTTAATGGAAAAAATCACTAACCATAGTAGAAAAGAAATAG
ACGCGGAATTTAAGAAAGATACTATAAAATTTCCTATTTTTGATCAAAATAGAAAACACATCGAGTATAATTCGCCCAAT
TCAGGGCAACCACTGAATGAAACGAGTAGCACCTCTCTTTTCGTTAAAGTTTTACTTTTCCCTCTAAAGGTTCTTTTGAA
GGTCCTGCAAAGTTGTATAATGCTATCTTTAGCTGCTGTTGAACTTCTTGAAACCGTGCCAAGTTTTTGTGTTGATCTGT
TTTTTGATAGAAGTTTTGAATCCACACAGAGTAACATGCAGAGATTTGGCCACTTATTGTATGCAAATGTGAGAAATTTA
GTGCCTATAACTAAATTTGATGAGTGTGTAGCTAATTTTATAGGTACCCCGAAAGTAACTTGTTGTAGTAGTGCGTAG

Upstream 100 bases:

>100_bases
GTAAAATAGTATATTTATAGATTTATCTTATTATAAATTTTAATTTCATAAAAGTGATTTTTTATTTATAGTTAAGAATG
AACTATCAAGGAGGTATTGT

Downstream 100 bases:

>100_bases
GTGAAAAAGGCAGTTATCTTATTTAATCTTGGCGGGCCTGATTCACTAAATGCGGTCCGTCCTTTTTTATTCAACCTTTT
TTATGACAGGAGAATAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MGKCCKNNTTKQAESTTKKLVSNFKSSLLCGTKGFLTFSLAFLSYLEYSSHHNTKLKEGAAFAMKRNTIPFLEMTIIAPL
VCFALPAMLGSMSLMQCALLCAALMIATCFIVRTFHLREKLMEKITNHSRKEIDAEFKKDTIKFPIFDQNRKHIEYNSPN
SGQPLNETSSTSLFVKVLLFPLKVLLKVLQSCIMLSLAAVELLETVPSFCVDLFFDRSFESTQSNMQRFGHLLYANVRNL
VPITKFDECVANFIGTPKVTCCSSA

Sequences:

>Translated_265_residues
MGKCCKNNTTKQAESTTKKLVSNFKSSLLCGTKGFLTFSLAFLSYLEYSSHHNTKLKEGAAFAMKRNTIPFLEMTIIAPL
VCFALPAMLGSMSLMQCALLCAALMIATCFIVRTFHLREKLMEKITNHSRKEIDAEFKKDTIKFPIFDQNRKHIEYNSPN
SGQPLNETSSTSLFVKVLLFPLKVLLKVLQSCIMLSLAAVELLETVPSFCVDLFFDRSFESTQSNMQRFGHLLYANVRNL
VPITKFDECVANFIGTPKVTCCSSA
>Mature_264_residues
GKCCKNNTTKQAESTTKKLVSNFKSSLLCGTKGFLTFSLAFLSYLEYSSHHNTKLKEGAAFAMKRNTIPFLEMTIIAPLV
CFALPAMLGSMSLMQCALLCAALMIATCFIVRTFHLREKLMEKITNHSRKEIDAEFKKDTIKFPIFDQNRKHIEYNSPNS
GQPLNETSSTSLFVKVLLFPLKVLLKVLQSCIMLSLAAVELLETVPSFCVDLFFDRSFESTQSNMQRFGHLLYANVRNLV
PITKFDECVANFIGTPKVTCCSSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29721; Mature: 29590

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GKCCKNNTTKQAESTTKKLVSNFKSSLLCGTKGFLTFSLAFLSYLEYSSHHNTKLKEGA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AFAMKRNTIPFLEMTIIAPLVCFALPAMLGSMSLMQCALLCAALMIATCFIVRTFHLREK
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMEKITNHSRKEIDAEFKKDTIKFPIFDQNRKHIEYNSPNSGQPLNETSSTSLFVKVLLF
HHHHHHCCHHHHHHHHHHHCCEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHH
PLKVLLKVLQSCIMLSLAAVELLETVPSFCVDLFFDRSFESTQSNMQRFGHLLYANVRNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
VPITKFDECVANFIGTPKVTCCSSA
CCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA