Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

Click here to switch to the map view.

The map label for this gene is 225630771

Identifier: 225630771

GI number: 225630771

Start: 1157705

End: 1158934

Strand: Reverse

Name: 225630771

Synonym: WRi_010690

Alternate gene names: NA

Gene position: 1158934-1157705 (Counterclockwise)

Preceding gene: 225630772

Following gene: 225630766

Centisome position: 80.15

GC content: 35.2

Gene sequence:

>1230_bases
ATGTTGCAGAGGAATTTTTTAGTCTGGCTGTTGGCGTCACTGTTTTATGCATACCAATATATATTACGCGTAATTCCAAA
CATAATTGCGCCTGAATTGATAACAAAATTTAACATAAGTATTACAGATGTTGGCCAGTTTGGTGGGTTATACTATGTAG
GCTATACGCTGGCTCACATACCTATTGGTCTTGCTCTTGACAAATTCGGGCCAAAATTTGTTTTGCCTATTTGTATTATC
TTAACATTTACCGGAACATTACCACTTATATGCTTTGATGAGTGGTATTATTCAATACTTGGCAGAATAGTCGTTGGAAT
TGGGTCATCCGCTTCAGCAATTGGGCTTTTTAAAGTTGCAAGCATGTATTTTGCGCAAGAAAAATCAGCAAGAATGGCCA
GCTTATCTATAATTATAGGAATTTTGGGAGGGATATGTGGCGGGTTACCTTTAGACTTCTTACTCGATAAATTTGGCTGG
AATTATGTTATCTATACATTCTCAGCATTTGGGTGTTTACTTGCTCTGTTGCTGTTCTTAGTAACGCCTGAAAGCAATGC
TCAACAGGAAAAAGTTAGCATTAGAGACTTAAAAAACATACTTTTCAACAAGCATATTATTCTAATTAGCTTTTTTGGTG
GACTCATGGTCGGTCCAATGCAAGGTTTTGCCGATGGTTGGGTGAAAACATTCTTTTTTGAAGTATATAAAATGAATGAA
GACTTGGCATCTTCTCTCTCTTCCGTAATATTGATAGGAATGTTAATAGGATCATTCTCTTTGGCTTATTTATTGGAAAA
ATATAAAAATAAGCATTATGAAGTAATAATTGCATGCTCATTTGCAATGATCGCTAGTTTTCTTTTGCTTTTTACTCAGA
TTGGTGGCTTGTATGTTGTATTACCTACGCTTTTTATTATTGGCTTCACATCTGGATATCAGGTGGTTACCATTTACAAA
GCGATAAGTTATGTAAATAATAACTTAGTAGGCCTGGCTACAGCTGTGTCAAACATGATAGTTATGGTTTTTGGCTATTT
TTTTCACACTGGGATCGCAAAAATAGTAGATTTGTGTTGGGATAGAACAATAATACAAGGAAATCCTGTGTATGGTGCTG
AATTGCTGATAAAAGCAACATCAGTTATTCCTGTATGTTTGCTGGTGGCTGTTTTTGGGCTCTTATGGTTAAAAAATAAA
GATTTTAGAGAAGTTGATTGTAATAAGTAG

Upstream 100 bases:

>100_bases
AGTTATAAGCTGTAAAAAGAGCTAAGCAGATTTAGATGATTAATATAGTATTGTTTTTTATAACTAAAGTATCTATAATC
CTAAATTTTAGCTGAGATTC

Downstream 100 bases:

>100_bases
ATAATTTATCGAAGGCTCGTATGATAAAATCGTTAGATGTACTAATTTAAGGCTCTTGTTATTATGAAATATAATACTTT
ATTTTACTTTGATATTTTTG

Product: permease, putative

Products: NA

Alternate protein names: Facilitator Transporter; Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Permease; Sugar Phosphate Permease; Transporter MFS Superfamily; Facilitator Family Transporter Transporter; Sugar Transporter; Multidrug ABC Transporter; Facilitator Superfamily Sugar Transporter; NasA Protein; Bicyclomycin Resistance Protein; Facilitator Protein; Facilitator Membrane Proteins; Intraphagosomal Amino Acid Transporter Family Protein; Transport Proteins; Facilitator Superfamily Permease

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MLQRNFLVWLLASLFYAYQYILRVIPNIIAPELITKFNISITDVGQFGGLYYVGYTLAHIPIGLALDKFGPKFVLPICII
LTFTGTLPLICFDEWYYSILGRIVVGIGSSASAIGLFKVASMYFAQEKSARMASLSIIIGILGGICGGLPLDFLLDKFGW
NYVIYTFSAFGCLLALLLFLVTPESNAQQEKVSIRDLKNILFNKHIILISFFGGLMVGPMQGFADGWVKTFFFEVYKMNE
DLASSLSSVILIGMLIGSFSLAYLLEKYKNKHYEVIIACSFAMIASFLLLFTQIGGLYVVLPTLFIIGFTSGYQVVTIYK
AISYVNNNLVGLATAVSNMIVMVFGYFFHTGIAKIVDLCWDRTIIQGNPVYGAELLIKATSVIPVCLLVAVFGLLWLKNK
DFREVDCNK

Sequences:

>Translated_409_residues
MLQRNFLVWLLASLFYAYQYILRVIPNIIAPELITKFNISITDVGQFGGLYYVGYTLAHIPIGLALDKFGPKFVLPICII
LTFTGTLPLICFDEWYYSILGRIVVGIGSSASAIGLFKVASMYFAQEKSARMASLSIIIGILGGICGGLPLDFLLDKFGW
NYVIYTFSAFGCLLALLLFLVTPESNAQQEKVSIRDLKNILFNKHIILISFFGGLMVGPMQGFADGWVKTFFFEVYKMNE
DLASSLSSVILIGMLIGSFSLAYLLEKYKNKHYEVIIACSFAMIASFLLLFTQIGGLYVVLPTLFIIGFTSGYQVVTIYK
AISYVNNNLVGLATAVSNMIVMVFGYFFHTGIAKIVDLCWDRTIIQGNPVYGAELLIKATSVIPVCLLVAVFGLLWLKNK
DFREVDCNK
>Mature_409_residues
MLQRNFLVWLLASLFYAYQYILRVIPNIIAPELITKFNISITDVGQFGGLYYVGYTLAHIPIGLALDKFGPKFVLPICII
LTFTGTLPLICFDEWYYSILGRIVVGIGSSASAIGLFKVASMYFAQEKSARMASLSIIIGILGGICGGLPLDFLLDKFGW
NYVIYTFSAFGCLLALLLFLVTPESNAQQEKVSIRDLKNILFNKHIILISFFGGLMVGPMQGFADGWVKTFFFEVYKMNE
DLASSLSSVILIGMLIGSFSLAYLLEKYKNKHYEVIIACSFAMIASFLLLFTQIGGLYVVLPTLFIIGFTSGYQVVTIYK
AISYVNNNLVGLATAVSNMIVMVFGYFFHTGIAKIVDLCWDRTIIQGNPVYGAELLIKATSVIPVCLLVAVFGLLWLKNK
DFREVDCNK

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45449; Mature: 45449

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQRNFLVWLLASLFYAYQYILRVIPNIIAPELITKFNISITDVGQFGGLYYVGYTLAHI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHCCHHHHHHHHHHH
PIGLALDKFGPKFVLPICIILTFTGTLPLICFDEWYYSILGRIVVGIGSSASAIGLFKVA
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SMYFAQEKSARMASLSIIIGILGGICGGLPLDFLLDKFGWNYVIYTFSAFGCLLALLLFL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
VTPESNAQQEKVSIRDLKNILFNKHIILISFFGGLMVGPMQGFADGWVKTFFFEVYKMNE
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH
DLASSLSSVILIGMLIGSFSLAYLLEKYKNKHYEVIIACSFAMIASFLLLFTQIGGLYVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHCCHHHH
LPTLFIIGFTSGYQVVTIYKAISYVNNNLVGLATAVSNMIVMVFGYFFHTGIAKIVDLCW
HHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRTIIQGNPVYGAELLIKATSVIPVCLLVAVFGLLWLKNKDFREVDCNK
CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLQRNFLVWLLASLFYAYQYILRVIPNIIAPELITKFNISITDVGQFGGLYYVGYTLAHI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHCCHHHHHHHHHHH
PIGLALDKFGPKFVLPICIILTFTGTLPLICFDEWYYSILGRIVVGIGSSASAIGLFKVA
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SMYFAQEKSARMASLSIIIGILGGICGGLPLDFLLDKFGWNYVIYTFSAFGCLLALLLFL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
VTPESNAQQEKVSIRDLKNILFNKHIILISFFGGLMVGPMQGFADGWVKTFFFEVYKMNE
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH
DLASSLSSVILIGMLIGSFSLAYLLEKYKNKHYEVIIACSFAMIASFLLLFTQIGGLYVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHCCHHHH
LPTLFIIGFTSGYQVVTIYKAISYVNNNLVGLATAVSNMIVMVFGYFFHTGIAKIVDLCW
HHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRTIIQGNPVYGAELLIKATSVIPVCLLVAVFGLLWLKNKDFREVDCNK
CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA