| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526128
Identifier: 222526128
GI number: 222526128
Start: 3568947
End: 3570218
Strand: Direct
Name: 222526128
Synonym: Chy400_2885
Alternate gene names: NA
Gene position: 3568947-3570218 (Clockwise)
Preceding gene: 222526123
Following gene: 222526129
Centisome position: 67.74
GC content: 56.29
Gene sequence:
>1272_bases ATGCTGGTTGCCGAGTCGACGGCTGCAATCAATGCAGCCTGCTTGAATGCAGACCATGTACGACCGTTGTACGATACCTT CGGGTTTGCCCGGATTCCGGATACCATTCGCTATCTGTTAACCGGCAAGGCTGCGTCACCGTTACCTGAGGTTGCTCTTA GTGGCTTACCTGATCATCCGGCGACGGTGGTGATGGTGATGCTCGATTCGTTCGGCTGGCATTTCTTCAGCCAGTATCTT GAACGGGCACCGTTTTTGCGCCGTTTTCTCCACCACGGGCGAATTTGCCAGTTGACGACCGCTTTTCCCTCCTCTACTCC TGTCCATGTAACGTTACTCCACACCGGTCTGGCTGTCGATCAGAGTGGTATCTACGAGTGGCATGTCTTTGAACCCGATC TCCAGGCTGTCATTGGCTCACTGCTCTTTTCTCCCGTCTTTGATCGCAAGGCCGATGGGTTGGTGGCGTATGGTGTTGAT CCGCTTGCCGTCTATCCGCAGAGCCGTTTCTACCAGCAGTTGCAAACGGCAGGTGCGAGTAGTGTTGTGCTCATGCCGGC GGCGCTGGCCCATTCGGTGTATACCCGTACCATGTGCAGTGGGGCGTTGGTCGTGCCATTCCAGGATATTCCTGATGCAA CTGTCCGCCTGCGGTATTTGTTTGAACAACAGGTGGCACCCACCTTTTACCATCTGTACATCGACTCTGTCGATGCTGCG ATGCATCGGTACGGGCCAGAGTCGGTTCAGGTTGAGAATGAAATTGTCACCACGCTTGATCATCTTGAACAGTATCTCTG GCCGCTCCTTCACAGGGCACCGCAACCGACCGTCTTGTTATTGACTGCCGATCACGGTCATATAACGGTTGATCCGCAAC AGGCAATTGTGCTTAACCGGCTATGGCCCGACCTGGAGCGCTTCCTGCGGCAGGGTGGTGATCGCCGACCTCTCCCACCA TCGGGATCGCCGCGCGTGACGGTCTTGCACGTGCAGCCCGCAGCCGTCGCTGATGTGCAGCTAGCATTGCAACGTCGACT CGGCGAGCGGGCAACGGTGGTGGCGAGTGCCCGTCTGGTGGAAGATGGCTATTTCGGGCCGCAACCCGGTGAACGGCTAC GCTCTCGATTGGGTGAATTGATAATTCTCCCTGCACCTGGAGAAGTGATTGTCTGGGATCATCCGCAAGCCAACCCGTTT ACGTATCGTGGCATGCACGGTGGTCTAACCCCGACAGAGATGCTGACGGAACTGGCCTGGGTTGTGGTATAG
Upstream 100 bases:
>100_bases TCTTTGCATGCGACAAGTATTGTGATATGGCTACACTGTGTGCAATCGAGTCGGTTATTACCTGTGACATATTGCACGCT TTATTATTCAGGAGGCGTCT
Downstream 100 bases:
>100_bases GTGTGGGGATGATGGTTTTCATGCCGGGTCTTTGTCTGTTGTCGCTACTACCCGCACGCAGCCCTTGCCACGATGTGATA AGATACACGAGAGACGTTTG
Product: type I phosphodiesterase/nucleotide pyrophosphatase
Products: NA
Alternate protein names: Phosphodiesterase; Type I Phosphodiesterase / Nucleotide Pyrophosphatase; AP Superfamily Protein; Nucleotide Pyrophosphatase; Phosphodiesterase I/Nucleotide Pyrophosphatase; LOW QUALITY PROTEIN Phosphodiesterase; Phosphodiesterase/Nucleotide Pyrophosphatase; Phosphodiesterase Protein; Protein Of AP Superfamily
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MLVAESTAAINAACLNADHVRPLYDTFGFARIPDTIRYLLTGKAASPLPEVALSGLPDHPATVVMVMLDSFGWHFFSQYL ERAPFLRRFLHHGRICQLTTAFPSSTPVHVTLLHTGLAVDQSGIYEWHVFEPDLQAVIGSLLFSPVFDRKADGLVAYGVD PLAVYPQSRFYQQLQTAGASSVVLMPAALAHSVYTRTMCSGALVVPFQDIPDATVRLRYLFEQQVAPTFYHLYIDSVDAA MHRYGPESVQVENEIVTTLDHLEQYLWPLLHRAPQPTVLLLTADHGHITVDPQQAIVLNRLWPDLERFLRQGGDRRPLPP SGSPRVTVLHVQPAAVADVQLALQRRLGERATVVASARLVEDGYFGPQPGERLRSRLGELIILPAPGEVIVWDHPQANPF TYRGMHGGLTPTEMLTELAWVVV
Sequences:
>Translated_423_residues MLVAESTAAINAACLNADHVRPLYDTFGFARIPDTIRYLLTGKAASPLPEVALSGLPDHPATVVMVMLDSFGWHFFSQYL ERAPFLRRFLHHGRICQLTTAFPSSTPVHVTLLHTGLAVDQSGIYEWHVFEPDLQAVIGSLLFSPVFDRKADGLVAYGVD PLAVYPQSRFYQQLQTAGASSVVLMPAALAHSVYTRTMCSGALVVPFQDIPDATVRLRYLFEQQVAPTFYHLYIDSVDAA MHRYGPESVQVENEIVTTLDHLEQYLWPLLHRAPQPTVLLLTADHGHITVDPQQAIVLNRLWPDLERFLRQGGDRRPLPP SGSPRVTVLHVQPAAVADVQLALQRRLGERATVVASARLVEDGYFGPQPGERLRSRLGELIILPAPGEVIVWDHPQANPF TYRGMHGGLTPTEMLTELAWVVV >Mature_423_residues MLVAESTAAINAACLNADHVRPLYDTFGFARIPDTIRYLLTGKAASPLPEVALSGLPDHPATVVMVMLDSFGWHFFSQYL ERAPFLRRFLHHGRICQLTTAFPSSTPVHVTLLHTGLAVDQSGIYEWHVFEPDLQAVIGSLLFSPVFDRKADGLVAYGVD PLAVYPQSRFYQQLQTAGASSVVLMPAALAHSVYTRTMCSGALVVPFQDIPDATVRLRYLFEQQVAPTFYHLYIDSVDAA MHRYGPESVQVENEIVTTLDHLEQYLWPLLHRAPQPTVLLLTADHGHITVDPQQAIVLNRLWPDLERFLRQGGDRRPLPP SGSPRVTVLHVQPAAVADVQLALQRRLGERATVVASARLVEDGYFGPQPGERLRSRLGELIILPAPGEVIVWDHPQANPF TYRGMHGGLTPTEMLTELAWVVV
Specific function: Unknown
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46934; Mature: 46934
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVAESTAAINAACLNADHVRPLYDTFGFARIPDTIRYLLTGKAASPLPEVALSGLPDHP CEECCCCCHHHHHHCCCCCCCHHHHHCCCHHCCHHHHHHHCCCCCCCCHHHHHCCCCCCC ATVVMVMLDSFGWHFFSQYLERAPFLRRFLHHGRICQLTTAFPSSTPVHVTLLHTGLAVD HHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCEEC QSGIYEWHVFEPDLQAVIGSLLFSPVFDRKADGLVAYGVDPLAVYPQSRFYQQLQTAGAS CCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCHHHHHHHHHHCCCC SVVLMPAALAHSVYTRTMCSGALVVPFQDIPDATVRLRYLFEQQVAPTFYHLYIDSVDAA CEEEHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHH MHRYGPESVQVENEIVTTLDHLEQYLWPLLHRAPQPTVLLLTADHGHITVDPQQAIVLNR HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCHHHHHHHH LWPDLERFLRQGGDRRPLPPSGSPRVTVLHVQPAAVADVQLALQRRLGERATVVASARLV HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHEEEEHHHHH EDGYFGPQPGERLRSRLGELIILPAPGEVIVWDHPQANPFTYRGMHGGLTPTEMLTELAW CCCCCCCCCHHHHHHHCCCEEEEECCCCEEEECCCCCCCCEECCCCCCCCHHHHHHHHHH VVV HCC >Mature Secondary Structure MLVAESTAAINAACLNADHVRPLYDTFGFARIPDTIRYLLTGKAASPLPEVALSGLPDHP CEECCCCCHHHHHHCCCCCCCHHHHHCCCHHCCHHHHHHHCCCCCCCCHHHHHCCCCCCC ATVVMVMLDSFGWHFFSQYLERAPFLRRFLHHGRICQLTTAFPSSTPVHVTLLHTGLAVD HHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCEEC QSGIYEWHVFEPDLQAVIGSLLFSPVFDRKADGLVAYGVDPLAVYPQSRFYQQLQTAGAS CCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCHHHHHHHHHHCCCC SVVLMPAALAHSVYTRTMCSGALVVPFQDIPDATVRLRYLFEQQVAPTFYHLYIDSVDAA CEEEHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHH MHRYGPESVQVENEIVTTLDHLEQYLWPLLHRAPQPTVLLLTADHGHITVDPQQAIVLNR HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCHHHHHHHH LWPDLERFLRQGGDRRPLPPSGSPRVTVLHVQPAAVADVQLALQRRLGERATVVASARLV HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHEEEEHHHHH EDGYFGPQPGERLRSRLGELIILPAPGEVIVWDHPQANPFTYRGMHGGLTPTEMLTELAW CCCCCCCCCHHHHHHHCCCEEEEECCCCEEEECCCCCCCCEECCCCCCCCHHHHHHHHHH VVV HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA