| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is cysU [H]
Identifier: 222110717
GI number: 222110717
Start: 1602346
End: 1603197
Strand: Direct
Name: cysU [H]
Synonym: Dtpsy_1520
Alternate gene names: 222110717
Gene position: 1602346-1603197 (Clockwise)
Preceding gene: 222110716
Following gene: 222110718
Centisome position: 42.21
GC content: 63.62
Gene sequence:
>852_bases ATGAGTGGCAAGAAAAGCGCCCCCAGGCGAGCCAAGAGGGTATTGCCCGGCTTTGGCCTCACGCTGGGCTACACGCTGTT TTACCTGAGCATCATCGTGCTGATCCCGCTGCTGGCGCTGCTGCTCAAGACGTTCACCATGACCTGGCCGCAGTTCTGGG AAGCGGTGGCGTCGCCGCGCGTGCTGGCGTCGTACCGCCTCACGTTCGGTGCCTCGTTCATCGCCGCCTGCGTGAACTTG GTGTTCGGCCTGCTCATCGCCTGGGTGCTGGTGCGCTACAAGTTCCCGGGCAAGAAGATCGTGGATGCACTGGTGGACCT GCCGTTCGCGCTGCCCACAGCGGTCGCCGGTATTTCGCTCACCGCACTGCTCGCGGGCAATGGCTGGGTGGGGCAGTACC TGGAGCCGCTGGGCATCCAGCTCGCATTCAACCCCAACGGCATTGTGATTGCGCTGATTTTCATCGGCCTGCCATTCGTG GTGCGCACGGTGCAGCCAGTGCTGGAAGACAGCGAGAAGGAGTTGGAAGAAGCGGCCACCAGCCTGGGCGCCACGCGCTG GCAGATCTTTCGCCACGTGATCCTGCCGGCCATCATGCCCGCGCTGCTCACCGGCTTTGCCATGGCGTTCGCGCGTGCCG TGGGCGAGTACGGCTCCGTCATCTTCATCGCCGGCAACATGCCCATGGTGTCTGAAATCACGCCGCTGATCATCATCGGC AAGCTGGAGCAGTACGACTACGCAGGCGCCACTGCCGTGGCGGTGGTGATGCTGGTGATCTCTTTCGTCCTTCTGCTGGT CATCAACGCCTTGCAGGCCTGGCAGCGCCGCCACGCAGGAGCACCCGCATGA
Upstream 100 bases:
>100_bases CTGCCCGGGTAGGGTGGCGGTGCCCGCGCATGCAAGCGCGGTGCCTGCGGGCGTGGGCCGCACCGGCTTTTGACTGGCGG CGAATAACGGATAACTCCAT
Downstream 100 bases:
>100_bases GCGCCGCGAACACCCGTACCGTGCGGCGCGCGCAGGCCGGAACGACCGAGGCGCGCTGGATCCAGTGGGCGCTGATTGGC CTTGCCATGGTGTTCCTGCT
Product: sulfate ABC transporter inner membrane subunit cyst
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSGKKSAPRRAKRVLPGFGLTLGYTLFYLSIIVLIPLLALLLKTFTMTWPQFWEAVASPRVLASYRLTFGASFIAACVNL VFGLLIAWVLVRYKFPGKKIVDALVDLPFALPTAVAGISLTALLAGNGWVGQYLEPLGIQLAFNPNGIVIALIFIGLPFV VRTVQPVLEDSEKELEEAATSLGATRWQIFRHVILPAIMPALLTGFAMAFARAVGEYGSVIFIAGNMPMVSEITPLIIIG KLEQYDYAGATAVAVVMLVISFVLLLVINALQAWQRRHAGAPA
Sequences:
>Translated_283_residues MSGKKSAPRRAKRVLPGFGLTLGYTLFYLSIIVLIPLLALLLKTFTMTWPQFWEAVASPRVLASYRLTFGASFIAACVNL VFGLLIAWVLVRYKFPGKKIVDALVDLPFALPTAVAGISLTALLAGNGWVGQYLEPLGIQLAFNPNGIVIALIFIGLPFV VRTVQPVLEDSEKELEEAATSLGATRWQIFRHVILPAIMPALLTGFAMAFARAVGEYGSVIFIAGNMPMVSEITPLIIIG KLEQYDYAGATAVAVVMLVISFVLLLVINALQAWQRRHAGAPA >Mature_282_residues SGKKSAPRRAKRVLPGFGLTLGYTLFYLSIIVLIPLLALLLKTFTMTWPQFWEAVASPRVLASYRLTFGASFIAACVNLV FGLLIAWVLVRYKFPGKKIVDALVDLPFALPTAVAGISLTALLAGNGWVGQYLEPLGIQLAFNPNGIVIALIFIGLPFVV RTVQPVLEDSEKELEEAATSLGATRWQIFRHVILPAIMPALLTGFAMAFARAVGEYGSVIFIAGNMPMVSEITPLIIIGK LEQYDYAGATAVAVVMLVISFVLLLVINALQAWQRRHAGAPA
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=271, Percent_Identity=49.8154981549816, Blast_Score=254, Evalue=4e-69, Organism=Escherichia coli, GI87082099, Length=251, Percent_Identity=33.8645418326693, Blast_Score=147, Evalue=7e-37, Organism=Escherichia coli, GI1786980, Length=216, Percent_Identity=32.8703703703704, Blast_Score=111, Evalue=6e-26, Organism=Escherichia coli, GI1786254, Length=209, Percent_Identity=26.3157894736842, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787369, Length=155, Percent_Identity=29.0322580645161, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1787368, Length=222, Percent_Identity=32.4324324324324, Blast_Score=71, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30643; Mature: 30512
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKKSAPRRAKRVLPGFGLTLGYTLFYLSIIVLIPLLALLLKTFTMTWPQFWEAVASPR CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCH VLASYRLTFGASFIAACVNLVFGLLIAWVLVRYKFPGKKIVDALVDLPFALPTAVAGISL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHH TALLAGNGWVGQYLEPLGIQLAFNPNGIVIALIFIGLPFVVRTVQPVLEDSEKELEEAAT HHHHCCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH SLGATRWQIFRHVILPAIMPALLTGFAMAFARAVGEYGSVIFIAGNMPMVSEITPLIIIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCEEEEE KLEQYDYAGATAVAVVMLVISFVLLLVINALQAWQRRHAGAPA CHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SGKKSAPRRAKRVLPGFGLTLGYTLFYLSIIVLIPLLALLLKTFTMTWPQFWEAVASPR CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCH VLASYRLTFGASFIAACVNLVFGLLIAWVLVRYKFPGKKIVDALVDLPFALPTAVAGISL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHH TALLAGNGWVGQYLEPLGIQLAFNPNGIVIALIFIGLPFVVRTVQPVLEDSEKELEEAAT HHHHCCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH SLGATRWQIFRHVILPAIMPALLTGFAMAFARAVGEYGSVIFIAGNMPMVSEITPLIIIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCEEEEE KLEQYDYAGATAVAVVMLVISFVLLLVINALQAWQRRHAGAPA CHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2188958; 9205837; 9278503; 2188959 [H]