| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is sbp [H]
Identifier: 222110716
GI number: 222110716
Start: 1601191
End: 1602198
Strand: Direct
Name: sbp [H]
Synonym: Dtpsy_1519
Alternate gene names: 222110716
Gene position: 1601191-1602198 (Clockwise)
Preceding gene: 222110715
Following gene: 222110717
Centisome position: 42.17
GC content: 64.38
Gene sequence:
>1008_bases ATGACCCCGGCAACCAAGCTCAAGACCCTTCTCGCCACGCTGGCCCTGGCGGCCAGCGGGCTGGCCTCGGCCCAGGCCAA TGCGCTGCTGAACGTCTCCTATGACGTGGCGCGCGAGTTCTACAAGGACTACAACCAGGCCTTCATCGCCCACTACAAGA AAACCAAGGGCGTGGACATCAAGGTGGACCAGGCCCATGGCGGCTCCAGCGCCCAGGCGCGCGCCGTGAACGATGGCCTG GCCGCCGACGTGGTCACCTTCAACACCACCACCGACGTGCAGTTCCTCGCGGACAACGGCGTGGTGGCCAAGGACTGGGC CAAGAAATTCCCGCATGACGCATCGCCCACCACCTCCACCATGCTGTTCCTGGTGCGCCACGGCAATCCCAAGAACATCA AGGACTGGAACGACCTGATCCGCCCCGATGTGAAGGTGGTGGTGGTGAACCCCAAGACCGGTGGCAACGGCCGCTACGCC TACCTGGGCGCCTGGGGCTCGGTGCGCGAGAAGGGCGGCAGCGACGCGCAGGCGGCGGAGTTCGTGGGCAAGCTCTACAA GAACGTGCCCGTGCTGGCCAAGGGTGGGCGTGATGCCACGGCCACCTTCCTGCAGCGCAACATTGGGGACGTGCTGATCA CGTTCGAGTCGGAGGTGGTGTCGGTGGAGCGTGAGTTCGGCAAGGGCAAGGTGGATGCGGTCTATCCCTCGGTGAGCGTG ACGGCCGAGAACCCTGTGGCCATCGTGGAGCGCACGGTCGCCAAGAAGGGCACGGGCGAACTGGCCAAGGCCTACCTCGA CTACCTGTACTCGGATGAAGCGCAGGAGATCGCCGCCAAGCACGCGATCCGCCCGCGCTCCGAGGCGGTGCTCAAGAAGC ATGCCGACCTGTTCAAGCCCATCCAGCAGTTCACGGTGGCCAAGTACTTTGGCTCGCTGACCGAGGCGCAGAAGGTGCAC TTCAACGACGGCGGTCAGTTCGACAAGCTCTACACGCCTGGCAAATAA
Upstream 100 bases:
>100_bases CATATGCTCATCCGTGGATAAATTTACAAAAATATATTCTTTTGAGTTTTAACCTGCGCTCTCCACAATGCATGATTTCC TGCAACGTGGAGGCGCTCCT
Downstream 100 bases:
>100_bases GCAGTGAACACGCCCCTGAGCCGCCTGGCGCCTTCACCCCGCCATGACTGCCCGGGTAGGGTGGCGGTGCCCGCGCATGC AAGCGCGGTGCCTGCGGGCG
Product: sulfate ABC transporter periplasmic sulfate-binding protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Sulfate starvation-induced protein 2; SSI2 [H]
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTPATKLKTLLATLALAASGLASAQANALLNVSYDVAREFYKDYNQAFIAHYKKTKGVDIKVDQAHGGSSAQARAVNDGL AADVVTFNTTTDVQFLADNGVVAKDWAKKFPHDASPTTSTMLFLVRHGNPKNIKDWNDLIRPDVKVVVVNPKTGGNGRYA YLGAWGSVREKGGSDAQAAEFVGKLYKNVPVLAKGGRDATATFLQRNIGDVLITFESEVVSVEREFGKGKVDAVYPSVSV TAENPVAIVERTVAKKGTGELAKAYLDYLYSDEAQEIAAKHAIRPRSEAVLKKHADLFKPIQQFTVAKYFGSLTEAQKVH FNDGGQFDKLYTPGK
Sequences:
>Translated_335_residues MTPATKLKTLLATLALAASGLASAQANALLNVSYDVAREFYKDYNQAFIAHYKKTKGVDIKVDQAHGGSSAQARAVNDGL AADVVTFNTTTDVQFLADNGVVAKDWAKKFPHDASPTTSTMLFLVRHGNPKNIKDWNDLIRPDVKVVVVNPKTGGNGRYA YLGAWGSVREKGGSDAQAAEFVGKLYKNVPVLAKGGRDATATFLQRNIGDVLITFESEVVSVEREFGKGKVDAVYPSVSV TAENPVAIVERTVAKKGTGELAKAYLDYLYSDEAQEIAAKHAIRPRSEAVLKKHADLFKPIQQFTVAKYFGSLTEAQKVH FNDGGQFDKLYTPGK >Mature_334_residues TPATKLKTLLATLALAASGLASAQANALLNVSYDVAREFYKDYNQAFIAHYKKTKGVDIKVDQAHGGSSAQARAVNDGLA ADVVTFNTTTDVQFLADNGVVAKDWAKKFPHDASPTTSTMLFLVRHGNPKNIKDWNDLIRPDVKVVVVNPKTGGNGRYAY LGAWGSVREKGGSDAQAAEFVGKLYKNVPVLAKGGRDATATFLQRNIGDVLITFESEVVSVEREFGKGKVDAVYPSVSVT AENPVAIVERTVAKKGTGELAKAYLDYLYSDEAQEIAAKHAIRPRSEAVLKKHADLFKPIQQFTVAKYFGSLTEAQKVHF NDGGQFDKLYTPGK
Specific function: This protein specifically binds sulfate and is involved in its transmembrane transport [H]
COG id: COG1613
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1790351, Length=319, Percent_Identity=49.2163009404389, Blast_Score=307, Evalue=5e-85, Organism=Escherichia coli, GI1788765, Length=314, Percent_Identity=46.4968152866242, Blast_Score=282, Evalue=2e-77,
Paralogues:
None
Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36289; Mature: 36158
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPATKLKTLLATLALAASGLASAQANALLNVSYDVAREFYKDYNQAFIAHYKKTKGVDI CCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEE KVDQAHGGSSAQARAVNDGLAADVVTFNTTTDVQFLADNGVVAKDWAKKFPHDASPTTST EEECCCCCCCCCHHECCCCCEEEEEEECCCCCEEEEECCCEEEHHHHHHCCCCCCCCCCE MLFLVRHGNPKNIKDWNDLIRPDVKVVVVNPKTGGNGRYAYLGAWGSVREKGGSDAQAAE EEEEEECCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCEEEEECCHHHHHCCCCCHHHHH FVGKLYKNVPVLAKGGRDATATFLQRNIGDVLITFESEVVSVEREFGKGKVDAVYPSVSV HHHHHHHCCCEEECCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCEEEECCCEEE TAENPVAIVERTVAKKGTGELAKAYLDYLYSDEAQEIAAKHAIRPRSEAVLKKHADLFKP ECCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH IQQFTVAKYFGSLTEAQKVHFNDGGQFDKLYTPGK HHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCC >Mature Secondary Structure TPATKLKTLLATLALAASGLASAQANALLNVSYDVAREFYKDYNQAFIAHYKKTKGVDI CCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEE KVDQAHGGSSAQARAVNDGLAADVVTFNTTTDVQFLADNGVVAKDWAKKFPHDASPTTST EEECCCCCCCCCHHECCCCCEEEEEEECCCCCEEEEECCCEEEHHHHHHCCCCCCCCCCE MLFLVRHGNPKNIKDWNDLIRPDVKVVVVNPKTGGNGRYAYLGAWGSVREKGGSDAQAAE EEEEEECCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCEEEEECCHHHHHCCCCCHHHHH FVGKLYKNVPVLAKGGRDATATFLQRNIGDVLITFESEVVSVEREFGKGKVDAVYPSVSV HHHHHHHCCCEEECCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCEEEECCCEEE TAENPVAIVERTVAKKGTGELAKAYLDYLYSDEAQEIAAKHAIRPRSEAVLKKHADLFKP ECCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH IQQFTVAKYFGSLTEAQKVHFNDGGQFDKLYTPGK HHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3158524; 2002055; 8346018; 9278503; 9298646; 8774726 [H]