| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
Click here to switch to the map view.
The map label for this gene is cysW [H]
Identifier: 222110718
GI number: 222110718
Start: 1603194
End: 1604105
Strand: Direct
Name: cysW [H]
Synonym: Dtpsy_1521
Alternate gene names: 222110718
Gene position: 1603194-1604105 (Clockwise)
Preceding gene: 222110717
Following gene: 222110719
Centisome position: 42.23
GC content: 67.0
Gene sequence:
>912_bases ATGAGCGCCGCGAACACCCGTACCGTGCGGCGCGCGCAGGCCGGAACGACCGAGGCGCGCTGGATCCAGTGGGCGCTGAT TGGCCTTGCCATGGTGTTCCTGCTGCTGTTCCTGGTGTTGCCGCTGGCCGCCGTGTTCACCGAGGCGCTGCGCAAGGGCG TGAATGCCTACCTGGAGGGATTGCGCGAGCCCGACGCCTGGTCTGCCATCCAGCTCACGCTGCTCACTGCCGTGATCGCC GTGCCGCTGAACCTGGTGTTCGGCATCGCCGCGGCGTGGTGCATCGCCAAGTACGAGTTCAAGGGCAAGGCCTTCTTGAC CACGCTGATCGATCTGCCGTTCTCCATCTCGCCCGTAGTGGCGGGCCTGATGTACGTGCTGGTGTTCGGCGCCAACGGCT GGCTGGGGCCCTGGCTGGCGGCGCACGACATCAAGATCATCTTCGCCGTGCCGGGCATCGTGCTGGCCACCGTGTTCGTC ACGTTCCCGTTCATCGCGCGTGAACTGATCCCGCTGATGCAGGCGCAAGGCAACGACGAGGAGCAGGCGGCGGTGGTGCT GGGCGCGAGCGGCTGGCAGACCTTCTGGCACGTGACGCTGCCCAACATCAAGTGGGGCCTGCTGTACGGCGTGATCCTGT GCAATGCCCGGGCGATGGGCGAGTTTGGCGCGGTGTCGGTGGTGTCGGGCCACATCCGCGGCCAGACCAACACCATCCCG CTGCACGTGGAGATCCTCTACAACGAATACCAATCGGTGGCCGCGTTCGCAGCCGCCTCGCTGCTGGCACTGCTGGCATT GGTCACGCTGGTCATCAAGTCGGTGGCCGAGTGGAAGAGCGAACAGGAAATGAAGGCTGCTGCCGCGCTGCCGCCCGAGC GGCCTGCGCCCGCGCCCGGCGCGCCGCGCTGA
Upstream 100 bases:
>100_bases CCACTGCCGTGGCGGTGGTGATGCTGGTGATCTCTTTCGTCCTTCTGCTGGTCATCAACGCCTTGCAGGCCTGGCAGCGC CGCCACGCAGGAGCACCCGC
Downstream 100 bases:
>100_bases AGGATGAACACATGAGCATTGAAATCCGCAACGTCAGCAAGCAGTTCGGCGACTTCCAGGCGCTGCGCGACGTCAGCCTG GACATCCAGTCGGGCGAACT
Product: sulfate ABC transporter inner membrane subunit cysw
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSAANTRTVRRAQAGTTEARWIQWALIGLAMVFLLLFLVLPLAAVFTEALRKGVNAYLEGLREPDAWSAIQLTLLTAVIA VPLNLVFGIAAAWCIAKYEFKGKAFLTTLIDLPFSISPVVAGLMYVLVFGANGWLGPWLAAHDIKIIFAVPGIVLATVFV TFPFIARELIPLMQAQGNDEEQAAVVLGASGWQTFWHVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTNTIP LHVEILYNEYQSVAAFAAASLLALLALVTLVIKSVAEWKSEQEMKAAAALPPERPAPAPGAPR
Sequences:
>Translated_303_residues MSAANTRTVRRAQAGTTEARWIQWALIGLAMVFLLLFLVLPLAAVFTEALRKGVNAYLEGLREPDAWSAIQLTLLTAVIA VPLNLVFGIAAAWCIAKYEFKGKAFLTTLIDLPFSISPVVAGLMYVLVFGANGWLGPWLAAHDIKIIFAVPGIVLATVFV TFPFIARELIPLMQAQGNDEEQAAVVLGASGWQTFWHVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTNTIP LHVEILYNEYQSVAAFAAASLLALLALVTLVIKSVAEWKSEQEMKAAAALPPERPAPAPGAPR >Mature_302_residues SAANTRTVRRAQAGTTEARWIQWALIGLAMVFLLLFLVLPLAAVFTEALRKGVNAYLEGLREPDAWSAIQLTLLTAVIAV PLNLVFGIAAAWCIAKYEFKGKAFLTTLIDLPFSISPVVAGLMYVLVFGANGWLGPWLAAHDIKIIFAVPGIVLATVFVT FPFIARELIPLMQAQGNDEEQAAVVLGASGWQTFWHVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTNTIPL HVEILYNEYQSVAAFAAASLLALLALVTLVIKSVAEWKSEQEMKAAAALPPERPAPAPGAPR
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=279, Percent_Identity=51.6129032258064, Blast_Score=302, Evalue=2e-83, Organism=Escherichia coli, GI1788764, Length=206, Percent_Identity=38.8349514563107, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1786980, Length=223, Percent_Identity=34.0807174887892, Blast_Score=97, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32659; Mature: 32528
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAANTRTVRRAQAGTTEARWIQWALIGLAMVFLLLFLVLPLAAVFTEALRKGVNAYLEG CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LREPDAWSAIQLTLLTAVIAVPLNLVFGIAAAWCIAKYEFKGKAFLTTLIDLPFSISPVV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHH AGLMYVLVFGANGWLGPWLAAHDIKIIFAVPGIVLATVFVTFPFIARELIPLMQAQGNDE HHHHHHHHHCCCCCCCCCHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EQAAVVLGASGWQTFWHVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTNTIP CCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHCCHHCCCCCCHHHHHHCCCCCCCEEE LHVEILYNEYQSVAAFAAASLLALLALVTLVIKSVAEWKSEQEMKAAAALPPERPAPAPG EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC APR CCC >Mature Secondary Structure SAANTRTVRRAQAGTTEARWIQWALIGLAMVFLLLFLVLPLAAVFTEALRKGVNAYLEG CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LREPDAWSAIQLTLLTAVIAVPLNLVFGIAAAWCIAKYEFKGKAFLTTLIDLPFSISPVV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHH AGLMYVLVFGANGWLGPWLAAHDIKIIFAVPGIVLATVFVTFPFIARELIPLMQAQGNDE HHHHHHHHHCCCCCCCCCHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EQAAVVLGASGWQTFWHVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTNTIP CCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHCCHHCCCCCCHHHHHHCCCCCCCEEE LHVEILYNEYQSVAAFAAASLLALLALVTLVIKSVAEWKSEQEMKAAAALPPERPAPAPG EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC APR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]