| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
Click here to switch to the map view.
The map label for this gene is mas [H]
Identifier: 222110083
GI number: 222110083
Start: 894133
End: 895137
Strand: Direct
Name: mas [H]
Synonym: Dtpsy_0869
Alternate gene names: 222110083
Gene position: 894133-895137 (Clockwise)
Preceding gene: 222110082
Following gene: 222110084
Centisome position: 23.55
GC content: 68.76
Gene sequence:
>1005_bases ATGAATGACGTGATGCAGGCCGTAGAGATTGCGGCGTTTGGCCCGCCTGAGGGGCTGCGTCTCGCCGAGCGCCCGGTGCC GCAGCCGGGAGACGGCGAGTTGTTGATCCGCGTGGCGGCCAGCGGGGTGAACCGCCCCGACGTGCTGCAGCGCAAGGGCA ACTACGCGCCACCCGCGGGCGTCTCCGATCTGCCGGGGCTGGAAGTGGCGGGCGTTGTCGAGTCCGGCGATGCCGCCGCC ATGGCGCAGGCGGGCCTTCGCGTGGGCGACCGGGTGTGCGCTTTGGTTGCGGGCGGCGGTTATGCGCAGTGGTGCGTCGC GCCTGTTGCGCAATGCCTGCCGGTGCCGCAGGGCTTGAGCGACGTGGAGGCGGCCTCGCTGCCGGAAACCTTCTTTACCG TCTGGAGCAATGTGTTCGACCGCGGCCGCCTGCAGGCGGGAGAGGTCCTGCTGGTGCAGGGCGGCAGTAGCGGCATTGGC GTTACGGCTATTCAGTTGGCGCGTGCACGCGGCGCCACGGTCATCGTCACGGCGGGTTCGGACGAAAAGTGCGCAGCCTG CCTGGCGCTGGGTGCGCACCACGCGATCAACTACAAGACACAGGACTTCGTGGCCGAGGCGCGGCGCCTTACCGATGGGC GCGGCGTGGACGTAGTGCTGGACATGGTGGCCGGCTCCTACGTGGCGCGCGAGGTTGAGTGTCTGGCCGAGGACGGCCGC GTGGTCATCATCGCGGTGCAGGGCGGGCTGGATGCGCAGTTCAATGCGGGGCTGGTGCTGCGCAGGCGGCTGACCATCAC GGGCTCCACGCTGAGGCCGCGTCCCGTGGCGTTCAAGGGCGCCATTGCGCAGGCATTGCGTGAGCATGTTTGGCCGCTGC TGGCGTCGGGCGCGGTGAAGCCGGTCATCCACAGCACCTTCCCGGCCGCGCAGGCCGCGCAGGCGCATGCGCTCATGGAA TCCAACCAGCACGTGGGCAAGATTGTTTTGACATGGACGACATGA
Upstream 100 bases:
>100_bases AGCCGGGGGTGTTCCTTCGGGAATACCTGTTTGCTATTGAAATGAGAGCTGCTAACGCCCGATGGACGGGCGCTAGCGGC TCAAATGATTCAAAACTGCC
Downstream 100 bases:
>100_bases CACAGAAAAAGAAACTCATTGCCGGCAACTGGAAGATGAACGGTAGCCTGCAGGCGAATGCGGTGCTGCTGCAGGCATTG CGCGATGGCTTGGGCGCGCC
Product: NAD(P)h quinone oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MNDVMQAVEIAAFGPPEGLRLAERPVPQPGDGELLIRVAASGVNRPDVLQRKGNYAPPAGVSDLPGLEVAGVVESGDAAA MAQAGLRVGDRVCALVAGGGYAQWCVAPVAQCLPVPQGLSDVEAASLPETFFTVWSNVFDRGRLQAGEVLLVQGGSSGIG VTAIQLARARGATVIVTAGSDEKCAACLALGAHHAINYKTQDFVAEARRLTDGRGVDVVLDMVAGSYVAREVECLAEDGR VVIIAVQGGLDAQFNAGLVLRRRLTITGSTLRPRPVAFKGAIAQALREHVWPLLASGAVKPVIHSTFPAAQAAQAHALME SNQHVGKIVLTWTT
Sequences:
>Translated_334_residues MNDVMQAVEIAAFGPPEGLRLAERPVPQPGDGELLIRVAASGVNRPDVLQRKGNYAPPAGVSDLPGLEVAGVVESGDAAA MAQAGLRVGDRVCALVAGGGYAQWCVAPVAQCLPVPQGLSDVEAASLPETFFTVWSNVFDRGRLQAGEVLLVQGGSSGIG VTAIQLARARGATVIVTAGSDEKCAACLALGAHHAINYKTQDFVAEARRLTDGRGVDVVLDMVAGSYVAREVECLAEDGR VVIIAVQGGLDAQFNAGLVLRRRLTITGSTLRPRPVAFKGAIAQALREHVWPLLASGAVKPVIHSTFPAAQAAQAHALME SNQHVGKIVLTWTT >Mature_334_residues MNDVMQAVEIAAFGPPEGLRLAERPVPQPGDGELLIRVAASGVNRPDVLQRKGNYAPPAGVSDLPGLEVAGVVESGDAAA MAQAGLRVGDRVCALVAGGGYAQWCVAPVAQCLPVPQGLSDVEAASLPETFFTVWSNVFDRGRLQAGEVLLVQGGSSGIG VTAIQLARARGATVIVTAGSDEKCAACLALGAHHAINYKTQDFVAEARRLTDGRGVDVVLDMVAGSYVAREVECLAEDGR VVIIAVQGGLDAQFNAGLVLRRRLTITGSTLRPRPVAFKGAIAQALREHVWPLLASGAVKPVIHSTFPAAQAAQAHALME SNQHVGKIVLTWTT
Specific function: Catalyzes the elongation of N-fatty acyl-CoA with methylamalonyl-CoA (not malonyl-CoA) as the elongating agent to form mycocerosyl lipids [H]
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Homo sapiens, GI22538446, Length=332, Percent_Identity=39.1566265060241, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI22538444, Length=332, Percent_Identity=39.1566265060241, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI194239674, Length=334, Percent_Identity=29.940119760479, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI13236495, Length=334, Percent_Identity=29.940119760479, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI24308257, Length=346, Percent_Identity=28.6127167630058, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI18379349, Length=314, Percent_Identity=29.2993630573248, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI194239676, Length=336, Percent_Identity=27.9761904761905, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI28557745, Length=225, Percent_Identity=34.6666666666667, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI41872631, Length=329, Percent_Identity=30.3951367781155, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI197927207, Length=188, Percent_Identity=28.7234042553192, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI47519420, Length=361, Percent_Identity=26.0387811634349, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1790485, Length=331, Percent_Identity=29.607250755287, Blast_Score=108, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17507255, Length=328, Percent_Identity=26.219512195122, Blast_Score=99, Evalue=4e-21, Organism=Caenorhabditis elegans, GI212642053, Length=315, Percent_Identity=27.3015873015873, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6319520, Length=335, Percent_Identity=26.865671641791, Blast_Score=102, Evalue=9e-23, Organism=Saccharomyces cerevisiae, GI6324486, Length=342, Percent_Identity=24.5614035087719, Blast_Score=67, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6323961, Length=282, Percent_Identity=24.468085106383, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI19920632, Length=257, Percent_Identity=31.1284046692607, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI221330659, Length=257, Percent_Identity=30.7392996108949, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI24581345, Length=339, Percent_Identity=28.6135693215339, Blast_Score=96, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001227 - InterPro: IPR009081 - InterPro: IPR014043 - InterPro: IPR016035 - InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR000794 - InterPro: IPR011032 - InterPro: IPR018201 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR016036 - InterPro: IPR016040 - InterPro: IPR006163 - InterPro: IPR020842 - InterPro: IPR020801 - InterPro: IPR020841 - InterPro: IPR020807 - InterPro: IPR020843 - InterPro: IPR013968 - InterPro: IPR006162 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00698 Acyl_transf_1; PF08240 ADH_N; PF00107 ADH_zinc_N; PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C; PF08659 KR; PF00550 PP-binding [H]
EC number: =2.3.1.111 [H]
Molecular weight: Translated: 34728; Mature: 34728
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDVMQAVEIAAFGPPEGLRLAERPVPQPGDGELLIRVAASGVNRPDVLQRKGNYAPPAG CCHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCC VSDLPGLEVAGVVESGDAAAMAQAGLRVGDRVCALVAGGGYAQWCVAPVAQCLPVPQGLS CCCCCCCEEEEEEECCCHHHHHHHCCHHCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCC DVEAASLPETFFTVWSNVFDRGRLQAGEVLLVQGGSSGIGVTAIQLARARGATVIVTAGS CCHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEECCC DEKCAACLALGAHHAINYKTQDFVAEARRLTDGRGVDVVLDMVAGSYVAREVECLAEDGR CCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC VVIIAVQGGLDAQFNAGLVLRRRLTITGSTLRPRPVAFKGAIAQALREHVWPLLASGAVK EEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC PVIHSTFPAAQAAQAHALMESNQHVGKIVLTWTT HHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEEEC >Mature Secondary Structure MNDVMQAVEIAAFGPPEGLRLAERPVPQPGDGELLIRVAASGVNRPDVLQRKGNYAPPAG CCHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCC VSDLPGLEVAGVVESGDAAAMAQAGLRVGDRVCALVAGGGYAQWCVAPVAQCLPVPQGLS CCCCCCCEEEEEEECCCHHHHHHHCCHHCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCC DVEAASLPETFFTVWSNVFDRGRLQAGEVLLVQGGSSGIGVTAIQLARARGATVIVTAGS CCHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEECCC DEKCAACLALGAHHAINYKTQDFVAEARRLTDGRGVDVVLDMVAGSYVAREVECLAEDGR CCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC VVIIAVQGGLDAQFNAGLVLRRRLTITGSTLRPRPVAFKGAIAQALREHVWPLLASGAVK EEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC PVIHSTFPAAQAAQAHALMESNQHVGKIVLTWTT HHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1527058; 12788972 [H]