Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

Click here to switch to the map view.

The map label for this gene is 222109666

Identifier: 222109666

GI number: 222109666

Start: 459399

End: 459656

Strand: Direct

Name: 222109666

Synonym: Dtpsy_0446

Alternate gene names: NA

Gene position: 459399-459656 (Clockwise)

Preceding gene: 222109665

Following gene: 222109668

Centisome position: 12.1

GC content: 62.79

Gene sequence:

>258_bases
ATGTCCGATCTGAACGCCACCTTCGAGGCCGCCGTGGCCAATTCCAAGAACCTCAGCGAGCGCCCCGACAACCCGACGCT
GCTGAAGATCTATGCGTTGTACAAGCAGGCCACCGCCGGCGACAACGCCGAGAAGAAGCCGAGCTTCTCTGACATCGTGG
GGCGCGCCAAGTGGGACGCGTGGGAAAAGCTCAAGGGCACGTCCGGCGACGCGGCCAAGCAGCAGTACATCGACTTGATC
GAATCCCTGCGCGGCTGA

Upstream 100 bases:

>100_bases
GCTGTGCATGGCGTGACCCTGGGGAGACTTTAAAAAAGAACGGTCGTTCGTGTTTTGACTACACTGTGCGGCGATACCAA
CCCTGAACCGGAGACACTCC

Downstream 100 bases:

>100_bases
GCGCTGTGGGCCCGCCAGCGTGTGGGCCCCCCAGGCCGCGAAGCCGCAGGCAGGCATGCGGGCGGGGGCAACGCGGCGTC
AGCCTCCGCCGTGGGCCACC

Product: acyl-CoA-binding protein acbp

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MSDLNATFEAAVANSKNLSERPDNPTLLKIYALYKQATAGDNAEKKPSFSDIVGRAKWDAWEKLKGTSGDAAKQQYIDLI
ESLRG

Sequences:

>Translated_85_residues
MSDLNATFEAAVANSKNLSERPDNPTLLKIYALYKQATAGDNAEKKPSFSDIVGRAKWDAWEKLKGTSGDAAKQQYIDLI
ESLRG
>Mature_84_residues
SDLNATFEAAVANSKNLSERPDNPTLLKIYALYKQATAGDNAEKKPSFSDIVGRAKWDAWEKLKGTSGDAAKQQYIDLIE
SLRG

Specific function: Unknown

COG id: COG4281

COG function: function code I; Acyl-CoA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI120433590, Length=80, Percent_Identity=43.75, Blast_Score=75, Evalue=1e-14,
Organism=Homo sapiens, GI120433593, Length=79, Percent_Identity=44.3037974683544, Blast_Score=75, Evalue=1e-14,
Organism=Homo sapiens, GI295842514, Length=69, Percent_Identity=44.9275362318841, Blast_Score=69, Evalue=6e-13,
Organism=Homo sapiens, GI295842534, Length=69, Percent_Identity=44.9275362318841, Blast_Score=69, Evalue=6e-13,
Organism=Homo sapiens, GI295849266, Length=69, Percent_Identity=44.9275362318841, Blast_Score=69, Evalue=8e-13,
Organism=Homo sapiens, GI295849279, Length=69, Percent_Identity=44.9275362318841, Blast_Score=68, Evalue=1e-12,
Organism=Homo sapiens, GI10140853, Length=69, Percent_Identity=44.9275362318841, Blast_Score=68, Evalue=1e-12,
Organism=Homo sapiens, GI260274832, Length=71, Percent_Identity=45.0704225352113, Blast_Score=66, Evalue=6e-12,
Organism=Homo sapiens, GI45643119, Length=71, Percent_Identity=45.0704225352113, Blast_Score=66, Evalue=7e-12,
Organism=Homo sapiens, GI260275230, Length=71, Percent_Identity=45.0704225352113, Blast_Score=66, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17535521, Length=78, Percent_Identity=51.2820512820513, Blast_Score=81, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17506027, Length=80, Percent_Identity=45, Blast_Score=77, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6321474, Length=80, Percent_Identity=42.5, Blast_Score=71, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24659809, Length=80, Percent_Identity=46.25, Blast_Score=82, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24659814, Length=80, Percent_Identity=46.25, Blast_Score=82, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24582714, Length=83, Percent_Identity=44.578313253012, Blast_Score=69, Evalue=4e-13,
Organism=Drosophila melanogaster, GI21357027, Length=75, Percent_Identity=41.3333333333333, Blast_Score=63, Evalue=3e-11,
Organism=Drosophila melanogaster, GI19920606, Length=88, Percent_Identity=37.5, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9333; Mature: 9202

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLNATFEAAVANSKNLSERPDNPTLLKIYALYKQATAGDNAEKKPSFSDIVGRAKWDA
CCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
WEKLKGTSGDAAKQQYIDLIESLRG
HHHHCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDLNATFEAAVANSKNLSERPDNPTLLKIYALYKQATAGDNAEKKPSFSDIVGRAKWDA
CCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
WEKLKGTSGDAAKQQYIDLIESLRG
HHHHCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA