Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is 222109661

Identifier: 222109661

GI number: 222109661

Start: 452423

End: 453391

Strand: Direct

Name: 222109661

Synonym: Dtpsy_0441

Alternate gene names: NA

Gene position: 452423-453391 (Clockwise)

Preceding gene: 222109660

Following gene: 222109663

Centisome position: 11.92

GC content: 71.41

Gene sequence:

>969_bases
ATGGAACGCAGAACCTTCCTGGCGGCCTGTGCCGCCACGGCGGCGGCGCCGTGGGCGCGTGCCGACACGGGCTATCCCAG
CCAACCCATCCGCTGGGTGGTGCCCTACCCAGCGGGCGGCGGTACCGACGTGCTGGCGCGCACCGTGGCCGAGGCCATGC
GCGGCGGGCTGGGCCAGCAGATCGTGGTGGACAACCGGCCTGGCGCGTCCACCAACATCGGCAGCCAGATCGTCGCCACC
GCCAAGCCGGACGGCTACACTGTCATGTCGGCGGACAACGCGCTGCTGGCCTACAACGAGCACCTGTACCGCCGGCTGCC
CTTCCACCCGGACAAGGACTTCACGTACATCGGCGGGCTGTCGCGCTTTCCTCTGGTGCTGGTGGTGAATCCGGCGTTCG
CGGCGCAGACCTTCCAGGACTTCCTGGCCTATGTGAAGGCCCACCCCGGCCAGGTGAACTACGCCTCGCCCGGCAACGGC
TCGCCGCACCACCTGGCGATGGAGTTGTTCAAGCACCGCACGCAGACGTTCCTTACGCACATTCCCTACCGCGGCGCGGC
CCCGGCGGTGCAGGACGTGATGGGTGGTCAGGTGCCCTGCATGTTCCTGGACCTTGCGGCCGGCCTGCCGGTGATCCAGT
CGGGCAAGGTGCGGGCGCTGGCCATCGGCGCCGCCCGGCGTGCGGCCGCGCTGCCGCACGTGCCCACGCTGGCAGAGGTG
GGCGTGGCCGATGCCGAGGTCTATGCGTTTCAGGGCCTGCTGGGCCCGGCCGGGCTGCCGCCGGCCATCACCGCGCGGCT
GAATGCCGCGCTGAACCAGGCGTTGGCCGCGCCCGAGGTGGTGGAGCGCATGCGGGCCTTTGGCATGGAACCGCTGGCCG
GCACGCCCGAGCAGTTCCACGCGCTGGCCCGCGCCGAGGCGCGGCGCTGGGGGCCGGTCATTGCCGCCACGGGCGTGAAG
CTGGATTGA

Upstream 100 bases:

>100_bases
CAGACCATTGCCGCGCCGCAGTAGTTTGAGGTCGTTTTGGGCCGTAGCGCTCGTCCATCAAGCGCGAGCAGCTATTCATA
AAAGAGCAAGGAGACAACCG

Downstream 100 bases:

>100_bases
GGTTTGGTGCCAAAAGTGGCTGTAGCGCTTGACAGTCAAGCGCTATCAGCTCACTTTTTGATAGTTAAGAGGCCAGCGGC
TCCACCTGCACCCGGCAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MERRTFLAACAATAAAPWARADTGYPSQPIRWVVPYPAGGGTDVLARTVAEAMRGGLGQQIVVDNRPGASTNIGSQIVAT
AKPDGYTVMSADNALLAYNEHLYRRLPFHPDKDFTYIGGLSRFPLVLVVNPAFAAQTFQDFLAYVKAHPGQVNYASPGNG
SPHHLAMELFKHRTQTFLTHIPYRGAAPAVQDVMGGQVPCMFLDLAAGLPVIQSGKVRALAIGAARRAAALPHVPTLAEV
GVADAEVYAFQGLLGPAGLPPAITARLNAALNQALAAPEVVERMRAFGMEPLAGTPEQFHALARAEARRWGPVIAATGVK
LD

Sequences:

>Translated_322_residues
MERRTFLAACAATAAAPWARADTGYPSQPIRWVVPYPAGGGTDVLARTVAEAMRGGLGQQIVVDNRPGASTNIGSQIVAT
AKPDGYTVMSADNALLAYNEHLYRRLPFHPDKDFTYIGGLSRFPLVLVVNPAFAAQTFQDFLAYVKAHPGQVNYASPGNG
SPHHLAMELFKHRTQTFLTHIPYRGAAPAVQDVMGGQVPCMFLDLAAGLPVIQSGKVRALAIGAARRAAALPHVPTLAEV
GVADAEVYAFQGLLGPAGLPPAITARLNAALNQALAAPEVVERMRAFGMEPLAGTPEQFHALARAEARRWGPVIAATGVK
LD
>Mature_322_residues
MERRTFLAACAATAAAPWARADTGYPSQPIRWVVPYPAGGGTDVLARTVAEAMRGGLGQQIVVDNRPGASTNIGSQIVAT
AKPDGYTVMSADNALLAYNEHLYRRLPFHPDKDFTYIGGLSRFPLVLVVNPAFAAQTFQDFLAYVKAHPGQVNYASPGNG
SPHHLAMELFKHRTQTFLTHIPYRGAAPAVQDVMGGQVPCMFLDLAAGLPVIQSGKVRALAIGAARRAAALPHVPTLAEV
GVADAEVYAFQGLLGPAGLPPAITARLNAALNQALAAPEVVERMRAFGMEPLAGTPEQFHALARAEARRWGPVIAATGVK
LD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34089; Mature: 34089

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERRTFLAACAATAAAPWARADTGYPSQPIRWVVPYPAGGGTDVLARTVAEAMRGGLGQQ
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCE
IVVDNRPGASTNIGSQIVATAKPDGYTVMSADNALLAYNEHLYRRLPFHPDKDFTYIGGL
EEEECCCCCCCCCCCEEEEEECCCCEEEEECCCEEEEHHHHHHHHCCCCCCCCEEEECCC
SRFPLVLVVNPAFAAQTFQDFLAYVKAHPGQVNYASPGNGSPHHLAMELFKHRTQTFLTH
CCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH
IPYRGAAPAVQDVMGGQVPCMFLDLAAGLPVIQSGKVRALAIGAARRAAALPHVPTLAEV
CCCCCCCHHHHHHHCCCCCHHHHHHHCCCCEECCCCEEEEEECCHHHHHCCCCCCCHHHC
GVADAEVYAFQGLLGPAGLPPAITARLNAALNQALAAPEVVERMRAFGMEPLAGTPEQFH
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHH
ALARAEARRWGPVIAATGVKLD
HHHHHHHHHCCCEEEECCCCCC
>Mature Secondary Structure
MERRTFLAACAATAAAPWARADTGYPSQPIRWVVPYPAGGGTDVLARTVAEAMRGGLGQQ
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCE
IVVDNRPGASTNIGSQIVATAKPDGYTVMSADNALLAYNEHLYRRLPFHPDKDFTYIGGL
EEEECCCCCCCCCCCEEEEEECCCCEEEEECCCEEEEHHHHHHHHCCCCCCCCEEEECCC
SRFPLVLVVNPAFAAQTFQDFLAYVKAHPGQVNYASPGNGSPHHLAMELFKHRTQTFLTH
CCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH
IPYRGAAPAVQDVMGGQVPCMFLDLAAGLPVIQSGKVRALAIGAARRAAALPHVPTLAEV
CCCCCCCHHHHHHHCCCCCHHHHHHHCCCCEECCCCEEEEEECCHHHHHCCCCCCCHHHC
GVADAEVYAFQGLLGPAGLPPAITARLNAALNQALAAPEVVERMRAFGMEPLAGTPEQFH
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHH
ALARAEARRWGPVIAATGVKLD
HHHHHHHHHCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]