| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635825
Identifier: 221635825
GI number: 221635825
Start: 408079
End: 408219
Strand: Reverse
Name: 221635825
Synonym: trd_A0419
Alternate gene names: NA
Gene position: 408219-408079 (Counterclockwise)
Preceding gene: 221635829
Following gene: 221635820
Centisome position: 44.48
GC content: 63.12
Gene sequence:
>141_bases GTGGCTCGTCCACGATATCCTCAGCTCGTGCAGTATTCGATCCGAATCCGATGCTCCACGGTCGACCCCCGCTTGGCTTC TGTCCCCACGATCCGTCGACGCTCGCTGCTCGGTGTGACGGACCGTTCCCGCCATCCCTAG
Upstream 100 bases:
>100_bases CCCGTCCACCGTGACCTCGAAACGCCCACCCGACGAGGGGACCAAAGCGATCTCACCGATCTGAAGTTCGTACTTGTCCA AAAGCAACTCCACCGCACGG
Downstream 100 bases:
>100_bases ATTCCCCAGTATACCCCGGCCGCGCTCGTGGGGGAGATGCTCGCTCGTCTCAGCACGATGCGCTAGGCTCCTCGGCTCCA GACCACGCCCACCGCTCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 46; Mature: 45
Protein sequence:
>46_residues MARPRYPQLVQYSIRIRCSTVDPRLASVPTIRRRSLLGVTDRSRHP
Sequences:
>Translated_46_residues MARPRYPQLVQYSIRIRCSTVDPRLASVPTIRRRSLLGVTDRSRHP >Mature_45_residues ARPRYPQLVQYSIRIRCSTVDPRLASVPTIRRRSLLGVTDRSRHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5376; Mature: 5245
Theoretical pI: Translated: 12.33; Mature: 12.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPRYPQLVQYSIRIRCSTVDPRLASVPTIRRRSLLGVTDRSRHP CCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCC >Mature Secondary Structure ARPRYPQLVQYSIRIRCSTVDPRLASVPTIRRRSLLGVTDRSRHP CCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA