| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is recX [H]
Identifier: 220932025
GI number: 220932025
Start: 1282965
End: 1283444
Strand: Reverse
Name: recX [H]
Synonym: Hore_11880
Alternate gene names: 220932025
Gene position: 1283444-1282965 (Counterclockwise)
Preceding gene: 220932026
Following gene: 220932024
Centisome position: 49.78
GC content: 30.83
Gene sequence:
>480_bases TTGGAGGAGGATATATATCAAAAAGCCAAGGATGATGCATTTCGGCTCCTATCTTATCGGGAGCGGAGCCAGTATGAGCT AGCCAGCAGGTTGATTAAAAAAGGATATTCTAAAAATGTAGCAGATAAGGTTGTAAACCATCTCAAAACATTGGGATATA TAGATGATTATAGATTTTGCGAAAAATATGTTAGGCATAAAATAAAGAATAATCCCAGGGGAAAGATGCTTTTGTATTAT GAATTAAGGAAGAAGGGATTGGACGAGGGTACCATTAGAAATGTATTAGAGGAAATGGTCCCTGAAGAAACTGAAATTAA TATAGGAATAAAACTTGCTACAAAATGGTTACATCATAACCATAATATTAATAAAAAGTTATCAAAATTGAAGAGATATC TTAATCGAAAGGGATTTAGTTTATATATAATCCATAAAATTATTAATCAGATTGAAAACAATAATGAGAAAACATATTAA
Upstream 100 bases:
>100_bases GATGAAGTTGCCTCAACTAAAGAAAATAAATCAACTGGAAAATCGAAAGCTAAAGGTAAGAAAAAGTGATATAAATTATA TATAATAAGGGATGATAACC
Downstream 100 bases:
>100_bases TATTATGTATAAGGACATCTTCTTATAATTTTACAGTTGTTTTTTATAAAGGACCGCCCTTTAGCTATGGCGGTCTTTGT CTTTATTTCGGGTATTATTT
Product: regulatory protein RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MEEDIYQKAKDDAFRLLSYRERSQYELASRLIKKGYSKNVADKVVNHLKTLGYIDDYRFCEKYVRHKIKNNPRGKMLLYY ELRKKGLDEGTIRNVLEEMVPEETEINIGIKLATKWLHHNHNINKKLSKLKRYLNRKGFSLYIIHKIINQIENNNEKTY
Sequences:
>Translated_159_residues MEEDIYQKAKDDAFRLLSYRERSQYELASRLIKKGYSKNVADKVVNHLKTLGYIDDYRFCEKYVRHKIKNNPRGKMLLYY ELRKKGLDEGTIRNVLEEMVPEETEINIGIKLATKWLHHNHNINKKLSKLKRYLNRKGFSLYIIHKIINQIENNNEKTY >Mature_159_residues MEEDIYQKAKDDAFRLLSYRERSQYELASRLIKKGYSKNVADKVVNHLKTLGYIDDYRFCEKYVRHKIKNNPRGKMLLYY ELRKKGLDEGTIRNVLEEMVPEETEINIGIKLATKWLHHNHNINKKLSKLKRYLNRKGFSLYIIHKIINQIENNNEKTY
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 19136; Mature: 19136
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEDIYQKAKDDAFRLLSYRERSQYELASRLIKKGYSKNVADKVVNHLKTLGYIDDYRFC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHH EKYVRHKIKNNPRGKMLLYYELRKKGLDEGTIRNVLEEMVPEETEINIGIKLATKWLHHN HHHHHHHHCCCCCCCEEEHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC HNINKKLSKLKRYLNRKGFSLYIIHKIINQIENNNEKTY CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEEDIYQKAKDDAFRLLSYRERSQYELASRLIKKGYSKNVADKVVNHLKTLGYIDDYRFC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHH EKYVRHKIKNNPRGKMLLYYELRKKGLDEGTIRNVLEEMVPEETEINIGIKLATKWLHHN HHHHHHHHCCCCCCCEEEHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC HNINKKLSKLKRYLNRKGFSLYIIHKIINQIENNNEKTY CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9140972 [H]