Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218884445

Identifier: 218884445

GI number: 218884445

Start: 1066958

End: 1068289

Strand: Reverse

Name: 218884445

Synonym: DKAM_1134

Alternate gene names: NA

Gene position: 1068289-1066958 (Counterclockwise)

Preceding gene: 218884446

Following gene: 218884444

Centisome position: 78.25

GC content: 44.44

Gene sequence:

>1332_bases
ATGAGTAGGGTTGACACGGTTATACTATTGCTCATTGTATTAGTGGGTATGCTTGTTAGAGTCCCTTTCCTATGGACTAC
CTGTGGTAGTGACGTGGTTCAGTTCGCTGGTTTCGCAGATACCTTTCTACACCATGGTTTCCACTTCTATGATTACAACT
ACCTTGAGGCACCCGGCAATAACTGGCCGTATCCATGGAAGTATATTTATGGACCTGTACTCCTCCTCATATTGGCTCCT
TTAAGACTTATAGCACCGGATCCTGTGAAGGTGGTCAGGGATCACGGGTTGAATATATATGCCTCCCCATCGTGGTGTGG
GATTGTTAAATCTGTCTTCTCATTATTTGATGTTCTAACAGGGATCATGATCTACTATACTGCTAGAAGGATTTTTTCGA
CGAGTAGGCTGGTGGCAGCGATTGCTTCCTTACTATACTTATTGAACCCGATGACCATATATATCTCAGCGATATATGGC
ATGTTTGATAACATGGCTTTATTCTTCCTGCTCCTTGGGTTATACATGTACATGGATGGCAGGCATATGTTAGCCGGGTT
GTTCATCGCTGGGTTCTCGGTCTCCGTTAAGCAGACTATCCTGCCTTCACTGCTAGTGTTGATTACCGATGTCTTCAAGA
AGCATGGTTTATCGGGGGCTTCATTAAAGTATATCATGGTGGTTTTAACAGGTGCATTAGTCCCCTTCACCCCATTCATC
ATTGCTAGCCCGGGCACGATGGGATCACTGCTTAATGCATTGCTAGAATCATCTAAGCCTGGATATACTGAGCCCGTTGT
ATATAGTTTCAACGGTTTATCAAGCCTCATCACGTATAATTTCAGGGGTTACATCTGGGTTATTGAGTCATGGTGGGTTT
TCTTCACTGTTATAACCCTCTCACTCCTACTACTATACTATAAGCAGGGGAGTACTTTACTCCTATGTGTCTCACTCGCG
TACATTGCTTTTACTGCTTTCTACTGGAGGGTGAACCACCAATACCTGGTTCCACTAATAGCCTATATATCTCTGCTACT
GGTAGCCGGGGAGAACGCTGTATCTAAGCCCCTCTTATTATTTACATATATATGGATAGGGTTATGGCCTGTGGCGTTTC
CCACGAGCTGGTGGAGTCATGTACACATTGAGAATCCAGATGTGAATATATGGAGGCTCCTGGACTCCATTACTCTAATG
ATCTTTGATCCGGCCTTCTACGTAGCCTACTCGCTTGCCTTAACAACAAGCTTCTACATCATTATAGGATCCACTATGGT
GCACTGGTTGAAACAGTTGATGAATAAGAGGAGTGCCGCCGCCGGGATTTGA

Upstream 100 bases:

>100_bases
CCTAGGTGTTCACTCCAATTATATATGTTCATGGCCGCACCTTATTCTAGTAATAATATGATTGTTGAATCATGTGGATC
ATGTGGTTTAGGTGTATTCC

Downstream 100 bases:

>100_bases
ACCCGGGTCTCCCGCACCCTCTCCTCAACGGGCCTTAGGGTGTCACGGGCTCGAGAGGCCCGCATACTTGACCGGGCTAT
ACTACGGCGGCAGTCCGGAT

Product: PMT multi-domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MSRVDTVILLLIVLVGMLVRVPFLWTTCGSDVVQFAGFADTFLHHGFHFYDYNYLEAPGNNWPYPWKYIYGPVLLLILAP
LRLIAPDPVKVVRDHGLNIYASPSWCGIVKSVFSLFDVLTGIMIYYTARRIFSTSRLVAAIASLLYLLNPMTIYISAIYG
MFDNMALFFLLLGLYMYMDGRHMLAGLFIAGFSVSVKQTILPSLLVLITDVFKKHGLSGASLKYIMVVLTGALVPFTPFI
IASPGTMGSLLNALLESSKPGYTEPVVYSFNGLSSLITYNFRGYIWVIESWWVFFTVITLSLLLLYYKQGSTLLLCVSLA
YIAFTAFYWRVNHQYLVPLIAYISLLLVAGENAVSKPLLLFTYIWIGLWPVAFPTSWWSHVHIENPDVNIWRLLDSITLM
IFDPAFYVAYSLALTTSFYIIIGSTMVHWLKQLMNKRSAAAGI

Sequences:

>Translated_443_residues
MSRVDTVILLLIVLVGMLVRVPFLWTTCGSDVVQFAGFADTFLHHGFHFYDYNYLEAPGNNWPYPWKYIYGPVLLLILAP
LRLIAPDPVKVVRDHGLNIYASPSWCGIVKSVFSLFDVLTGIMIYYTARRIFSTSRLVAAIASLLYLLNPMTIYISAIYG
MFDNMALFFLLLGLYMYMDGRHMLAGLFIAGFSVSVKQTILPSLLVLITDVFKKHGLSGASLKYIMVVLTGALVPFTPFI
IASPGTMGSLLNALLESSKPGYTEPVVYSFNGLSSLITYNFRGYIWVIESWWVFFTVITLSLLLLYYKQGSTLLLCVSLA
YIAFTAFYWRVNHQYLVPLIAYISLLLVAGENAVSKPLLLFTYIWIGLWPVAFPTSWWSHVHIENPDVNIWRLLDSITLM
IFDPAFYVAYSLALTTSFYIIIGSTMVHWLKQLMNKRSAAAGI
>Mature_442_residues
SRVDTVILLLIVLVGMLVRVPFLWTTCGSDVVQFAGFADTFLHHGFHFYDYNYLEAPGNNWPYPWKYIYGPVLLLILAPL
RLIAPDPVKVVRDHGLNIYASPSWCGIVKSVFSLFDVLTGIMIYYTARRIFSTSRLVAAIASLLYLLNPMTIYISAIYGM
FDNMALFFLLLGLYMYMDGRHMLAGLFIAGFSVSVKQTILPSLLVLITDVFKKHGLSGASLKYIMVVLTGALVPFTPFII
ASPGTMGSLLNALLESSKPGYTEPVVYSFNGLSSLITYNFRGYIWVIESWWVFFTVITLSLLLLYYKQGSTLLLCVSLAY
IAFTAFYWRVNHQYLVPLIAYISLLLVAGENAVSKPLLLFTYIWIGLWPVAFPTSWWSHVHIENPDVNIWRLLDSITLMI
FDPAFYVAYSLALTTSFYIIIGSTMVHWLKQLMNKRSAAAGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50022; Mature: 49891

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SRVDTVILLLIVLVGMLVRVPFLWTTCGSDVVQFAGFADTFLHHGFHFYDYNYLEAPGN
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCEEECCCC
NWPYPWKYIYGPVLLLILAPLRLIAPDPVKVVRDHGLNIYASPSWCGIVKSVFSLFDVLT
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHH
GIMIYYTARRIFSTSRLVAAIASLLYLLNPMTIYISAIYGMFDNMALFFLLLGLYMYMDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RHMLAGLFIAGFSVSVKQTILPSLLVLITDVFKKHGLSGASLKYIMVVLTGALVPFTPFI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEE
IASPGTMGSLLNALLESSKPGYTEPVVYSFNGLSSLITYNFRGYIWVIESWWVFFTVITL
EECCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHEECCCEEEEEHHHHHHHHHHHHH
SLLLLYYKQGSTLLLCVSLAYIAFTAFYWRVNHQYLVPLIAYISLLLVAGENAVSKPLLL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHCHHHH
FTYIWIGLWPVAFPTSWWSHVHIENPDVNIWRLLDSITLMIFDPAFYVAYSLALTTSFYI
HHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
IIGSTMVHWLKQLMNKRSAAAGI
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA