Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884441

Identifier: 218884441

GI number: 218884441

Start: 1062560

End: 1063906

Strand: Reverse

Name: 218884441

Synonym: DKAM_1130

Alternate gene names: NA

Gene position: 1063906-1062560 (Counterclockwise)

Preceding gene: 218884444

Following gene: 218884439

Centisome position: 77.93

GC content: 53.23

Gene sequence:

>1347_bases
ATGGAGGGGTGTGAACTATTGAGCGAGTTCAACTCCCAGCCAGGGGTCTCAGCGCCCTGGTTTACGAGGGTTAGTGTGAA
GGGCTTGTCCGATGATTCTAGGAGGGTCATCTTACACCGCGTGAAGGACAAGCTCGGGTTTAACAAGGCTGTTGAGGTCC
TTGGCGTGTCCAAGGGCGCTCTCCACAACTACCTCCACGGCTTGAGGAGGATTCCCGATGAAGTCGTCTCCAAGGCTCTT
CAGCACTTAACAGAGGCGGAGTTCAAGGAGATAGTGCAGGGCGTTGATAGGCTGAGGGCTCTTGGAATCGTGAGGAGCGA
CGGGTCAGTGGACTACTCACTGATACTCCAGGCTATAGCCCTGGCCCACAGAGATGAGTACCTCAAGCATGCGCTACTTA
AGTTCGTGGTCGAGAACTTCAGGGAGGACTTGAAGAAGATGCTGGGCGTGTCCTACGCGCACGTGAAGTTCACCTGGGAG
AAGGGCTTCGAGGAGTTTCTATCCGAGAGAAAGAAGAGAAGAAAGGTAAGAGACCCGGAGACAATAAGCTACTACAGGAA
CTTGTTTAAGAAGTATCTCGAGGGTAGAGAGCTCAGCGAGGAGCTCGTCGACTACGTGATTAACCACGAGAACAAGTGGT
TGAGGAACGTCTTCAGGCACTACGTCCAGTACTTGTACTACAAGAGGGCAGTAAGCCCCGAGGTCTACGGCTGGCTAATG
GAGGTAGTGCCCTCCAGGAGCTACAAGATTGATGTCAGGCCTTACCCGATTAACGCCGAGGACCTCGCTAAAACAATGGG
GTTTCTGAGAACTAACCACGAGAAGTACTATCTAGTGTACAAGTTAATGCTCGAGGGCGGGCTGAGACTGTCTCACGCGC
TAACGCTTATCGAGACTTTTAACCCGGGTGAGGTTATCGAGGTACCGGGTGTTGGTCTAGAGACCAAGAGGCTTGTATGC
CTCCACGACAAGGGCTTCTGCAGGTACTACCTGGGCGTGAAGGATATAGCTAAGCCGTGTGAATGGGTCTATTTCTCACT
CAACACGCTTAGGCTACTAGAGAAGTACAGGGGGTCTAGAATCAGCAGGCGGGTTGTAGAGAAATTTGTCCGCGGCCACG
GCCTATTGGCTCCCAAGTACATGAGGAAAGCTTCTTGGAGGCTGATGATACAGGTAATGCCGAGGGAGGTGGCCAGGTTC
ATCCAATCACGCTTCGGAGAGCTCAAGGTCAGCGAGGCCAGGTACGAGGACTTGCTGGGCGAGGCTGACAAGTACTACCC
GGCCTACCTGGGCTTGCTGTCGAAGGCCTTCACCACGCTGAAGCAGTTAAATCAGCTTGAACGCTAG

Upstream 100 bases:

>100_bases
AGCCTGGACTAGGACGCCGGCCCTCCAAGCCGGAGATCCCGGGTTCAAATCCCGGCCGCCGCACTAATCCTTATTAACCC
CTCGCGGTTCACACTTCTAC

Downstream 100 bases:

>100_bases
TCCAATATTACCTGGGGGCGGGCGCTTAGCCTACTACTCGCGTTCTCGCACTAGAGCACTCTAAGCGCGGGTGCTTGTGG
GCTATTAGTGGTGTGCAACC

Product: integrase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MEGCELLSEFNSQPGVSAPWFTRVSVKGLSDDSRRVILHRVKDKLGFNKAVEVLGVSKGALHNYLHGLRRIPDEVVSKAL
QHLTEAEFKEIVQGVDRLRALGIVRSDGSVDYSLILQAIALAHRDEYLKHALLKFVVENFREDLKKMLGVSYAHVKFTWE
KGFEEFLSERKKRRKVRDPETISYYRNLFKKYLEGRELSEELVDYVINHENKWLRNVFRHYVQYLYYKRAVSPEVYGWLM
EVVPSRSYKIDVRPYPINAEDLAKTMGFLRTNHEKYYLVYKLMLEGGLRLSHALTLIETFNPGEVIEVPGVGLETKRLVC
LHDKGFCRYYLGVKDIAKPCEWVYFSLNTLRLLEKYRGSRISRRVVEKFVRGHGLLAPKYMRKASWRLMIQVMPREVARF
IQSRFGELKVSEARYEDLLGEADKYYPAYLGLLSKAFTTLKQLNQLER

Sequences:

>Translated_448_residues
MEGCELLSEFNSQPGVSAPWFTRVSVKGLSDDSRRVILHRVKDKLGFNKAVEVLGVSKGALHNYLHGLRRIPDEVVSKAL
QHLTEAEFKEIVQGVDRLRALGIVRSDGSVDYSLILQAIALAHRDEYLKHALLKFVVENFREDLKKMLGVSYAHVKFTWE
KGFEEFLSERKKRRKVRDPETISYYRNLFKKYLEGRELSEELVDYVINHENKWLRNVFRHYVQYLYYKRAVSPEVYGWLM
EVVPSRSYKIDVRPYPINAEDLAKTMGFLRTNHEKYYLVYKLMLEGGLRLSHALTLIETFNPGEVIEVPGVGLETKRLVC
LHDKGFCRYYLGVKDIAKPCEWVYFSLNTLRLLEKYRGSRISRRVVEKFVRGHGLLAPKYMRKASWRLMIQVMPREVARF
IQSRFGELKVSEARYEDLLGEADKYYPAYLGLLSKAFTTLKQLNQLER
>Mature_448_residues
MEGCELLSEFNSQPGVSAPWFTRVSVKGLSDDSRRVILHRVKDKLGFNKAVEVLGVSKGALHNYLHGLRRIPDEVVSKAL
QHLTEAEFKEIVQGVDRLRALGIVRSDGSVDYSLILQAIALAHRDEYLKHALLKFVVENFREDLKKMLGVSYAHVKFTWE
KGFEEFLSERKKRRKVRDPETISYYRNLFKKYLEGRELSEELVDYVINHENKWLRNVFRHYVQYLYYKRAVSPEVYGWLM
EVVPSRSYKIDVRPYPINAEDLAKTMGFLRTNHEKYYLVYKLMLEGGLRLSHALTLIETFNPGEVIEVPGVGLETKRLVC
LHDKGFCRYYLGVKDIAKPCEWVYFSLNTLRLLEKYRGSRISRRVVEKFVRGHGLLAPKYMRKASWRLMIQVMPREVARF
IQSRFGELKVSEARYEDLLGEADKYYPAYLGLLSKAFTTLKQLNQLER

Specific function: Unknown

COG id: COG4342

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52425; Mature: 52425

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGCELLSEFNSQPGVSAPWFTRVSVKGLSDDSRRVILHRVKDKLGFNKAVEVLGVSKGA
CCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHCCHHH
LHNYLHGLRRIPDEVVSKALQHLTEAEFKEIVQGVDRLRALGIVRSDGSVDYSLILQAIA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHH
LAHRDEYLKHALLKFVVENFREDLKKMLGVSYAHVKFTWEKGFEEFLSERKKRRKVRDPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEHHHHHHHHHHHHHHHHCCCCCH
TISYYRNLFKKYLEGRELSEELVDYVINHENKWLRNVFRHYVQYLYYKRAVSPEVYGWLM
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EVVPSRSYKIDVRPYPINAEDLAKTMGFLRTNHEKYYLVYKLMLEGGLRLSHALTLIETF
HHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC
NPGEVIEVPGVGLETKRLVCLHDKGFCRYYLGVKDIAKPCEWVYFSLNTLRLLEKYRGSR
CCCCEEECCCCCCCCCEEEEEECCCCHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHCCH
ISRRVVEKFVRGHGLLAPKYMRKASWRLMIQVMPREVARFIQSRFGELKVSEARYEDLLG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHC
EADKYYPAYLGLLSKAFTTLKQLNQLER
CCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEGCELLSEFNSQPGVSAPWFTRVSVKGLSDDSRRVILHRVKDKLGFNKAVEVLGVSKGA
CCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHCCHHH
LHNYLHGLRRIPDEVVSKALQHLTEAEFKEIVQGVDRLRALGIVRSDGSVDYSLILQAIA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHH
LAHRDEYLKHALLKFVVENFREDLKKMLGVSYAHVKFTWEKGFEEFLSERKKRRKVRDPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEHHHHHHHHHHHHHHHHCCCCCH
TISYYRNLFKKYLEGRELSEELVDYVINHENKWLRNVFRHYVQYLYYKRAVSPEVYGWLM
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EVVPSRSYKIDVRPYPINAEDLAKTMGFLRTNHEKYYLVYKLMLEGGLRLSHALTLIETF
HHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC
NPGEVIEVPGVGLETKRLVCLHDKGFCRYYLGVKDIAKPCEWVYFSLNTLRLLEKYRGSR
CCCCEEECCCCCCCCCEEEEEECCCCHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHCCH
ISRRVVEKFVRGHGLLAPKYMRKASWRLMIQVMPREVARFIQSRFGELKVSEARYEDLLG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHC
EADKYYPAYLGLLSKAFTTLKQLNQLER
CCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA