| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is fixG [H]
Identifier: 218711009
GI number: 218711009
Start: 3271116
End: 3272534
Strand: Direct
Name: fixG [H]
Synonym: VS_3138
Alternate gene names: 218711009
Gene position: 3271116-3272534 (Clockwise)
Preceding gene: 218711007
Following gene: 218711010
Centisome position: 99.15
GC content: 45.03
Gene sequence:
>1419_bases ATGAGTCAGGATAAAATCGATATCAAAGATGTGACTCCTAAAACCTTTAACCCAAAAACACATAAAGGTAATGGAGATCG ATTTAACCCAAGTAACCGAATCTATGTTCGAGAAAGCAAAGGTAAATTCCAACAACTGCGCCGTTATGGCGGTTGGTTCT TACTTTTACTTTTTGCGCTTATCCCATGGATCCCATTTGGTGAGCGACAAGCGATCTTGCTCGATATCGGCAGCCAACAG TTCAACTTCTTTGGTACAACCCTATACCCACAAGATCTAACGCTACTCGCCATCCTATTTATGATTGCTGCTTTTGGCTT ATTCTTCATAACCACCTTCTTAGGGCGAGTCTGGTGTGGCTACCTGTGTCCACAAACCGTCTGGACCTTCATGTACATCT GGTTCGAAGAGAAACTGGAAGGTGCTGCCAATAAGCGAAGAAAGCAAGACTCAGGCAAACTGACGAGCAATTTAATTCTC AGAAAAACCATCAAGCACATCGCGTGGTGGTCGATTGCGATTGCGACGGGCTTAACCTTTGTCGGTTACTTCATCCCAAT CAAAGAGCTGGTGGTTGGCTTCTTTACCTTTAACTCGACTTTCTGGCCGGTGTTTTGGGTATTGTTCTTTGCTGGGTGTA CTTATGCGAATGCAGGATGGATGCGTTCTATTGTTTGTCTGCACATGTGTCCTTACGCGCGTTTCCAATCTGCAATGTTC GATAAAGATACCTTCATCGTGGGTTACGACACTGAACGAGGTGAAAGCCGCGGCCCTCGCTCTCGTAAAGCCGATCCAAA AGAACTTGGTCTAGGCGACTGTATTGACTGTAATTTATGTGTTCAAGTGTGCCCAACGGGTATCGATATTCGTGACGGTC TGCAATACGAGTGTATTAACTGTGGCGCGTGTATTGATGCTTGTGACAACACCATGGAACGTATGGGTTATGAGAAAGGT CTGATCAACTACACCACCGAACATAGGCTTGAGGGGCACTCAACCAAGGTGATGCGTCCTAAGCTCTTGGGCTATGGCGT AATACTGATCGTTATGTTGGGGCTGTTTTTCGCACAAATCGCGAGTGTTGATCCTGCAGGCTTAAGCGTTCTGCGCGATA GAAACCAACTATTTAGAATCAATAGCCAAGGGCTTGTCGAAAATACTTACAACTTAAAAGTCATCAACAAGACTCAGCAA GAGCAAGAGTACAAACTTGATGTCAGCGGGCTGCCGGATTCTATCTGGTACGGTAAACAAACCATTACCGTAGACCCAGG TGAGGTTTTAAACCTTCCTATCAGTTTGGGCGTCGATCCAGAAAAACTGAGCTCACCAGTTTCGACAATTCAGTTTATAC TCTCGGATAATGAAGAGTTTACGATAAAAGTCGAAAGCCGCTTTATCAAGAAGCTCTGA
Upstream 100 bases:
>100_bases TGCACCAAGCTCAATTTCTACAGGTTCTCTAAACCATACTTTCAAGTAATGTCGTCATGCCCGAGTTAACCGGGCAAACA AGCCACAAAAAGGATAGTCC
Downstream 100 bases:
>100_bases TACCAGTCACCTTAGTGCTAGGTATAACAACCCAATAAATGGAAAAAGGCTCAGTAATGAGCCTTTTTTATTCTATGACG ATGCAAGCCTTTAACTTTGA
Product: putative nitrogen fixation protein fixG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MSQDKIDIKDVTPKTFNPKTHKGNGDRFNPSNRIYVRESKGKFQQLRRYGGWFLLLLFALIPWIPFGERQAILLDIGSQQ FNFFGTTLYPQDLTLLAILFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEKLEGAANKRRKQDSGKLTSNLIL RKTIKHIAWWSIAIATGLTFVGYFIPIKELVVGFFTFNSTFWPVFWVLFFAGCTYANAGWMRSIVCLHMCPYARFQSAMF DKDTFIVGYDTERGESRGPRSRKADPKELGLGDCIDCNLCVQVCPTGIDIRDGLQYECINCGACIDACDNTMERMGYEKG LINYTTEHRLEGHSTKVMRPKLLGYGVILIVMLGLFFAQIASVDPAGLSVLRDRNQLFRINSQGLVENTYNLKVINKTQQ EQEYKLDVSGLPDSIWYGKQTITVDPGEVLNLPISLGVDPEKLSSPVSTIQFILSDNEEFTIKVESRFIKKL
Sequences:
>Translated_472_residues MSQDKIDIKDVTPKTFNPKTHKGNGDRFNPSNRIYVRESKGKFQQLRRYGGWFLLLLFALIPWIPFGERQAILLDIGSQQ FNFFGTTLYPQDLTLLAILFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEKLEGAANKRRKQDSGKLTSNLIL RKTIKHIAWWSIAIATGLTFVGYFIPIKELVVGFFTFNSTFWPVFWVLFFAGCTYANAGWMRSIVCLHMCPYARFQSAMF DKDTFIVGYDTERGESRGPRSRKADPKELGLGDCIDCNLCVQVCPTGIDIRDGLQYECINCGACIDACDNTMERMGYEKG LINYTTEHRLEGHSTKVMRPKLLGYGVILIVMLGLFFAQIASVDPAGLSVLRDRNQLFRINSQGLVENTYNLKVINKTQQ EQEYKLDVSGLPDSIWYGKQTITVDPGEVLNLPISLGVDPEKLSSPVSTIQFILSDNEEFTIKVESRFIKKL >Mature_471_residues SQDKIDIKDVTPKTFNPKTHKGNGDRFNPSNRIYVRESKGKFQQLRRYGGWFLLLLFALIPWIPFGERQAILLDIGSQQF NFFGTTLYPQDLTLLAILFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEKLEGAANKRRKQDSGKLTSNLILR KTIKHIAWWSIAIATGLTFVGYFIPIKELVVGFFTFNSTFWPVFWVLFFAGCTYANAGWMRSIVCLHMCPYARFQSAMFD KDTFIVGYDTERGESRGPRSRKADPKELGLGDCIDCNLCVQVCPTGIDIRDGLQYECINCGACIDACDNTMERMGYEKGL INYTTEHRLEGHSTKVMRPKLLGYGVILIVMLGLFFAQIASVDPAGLSVLRDRNQLFRINSQGLVENTYNLKVINKTQQE QEYKLDVSGLPDSIWYGKQTITVDPGEVLNLPISLGVDPEKLSSPVSTIQFILSDNEEFTIKVESRFIKKL
Specific function: FixG is predicted to be involved in a redox process. The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]
COG id: COG0348
COG function: function code C; Polyferredoxin
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR014116 - InterPro: IPR012285 - InterPro: IPR013783 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53840; Mature: 53709
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQDKIDIKDVTPKTFNPKTHKGNGDRFNPSNRIYVRESKGKFQQLRRYGGWFLLLLFAL CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHH IPWIPFGERQAILLDIGSQQFNFFGTTLYPQDLTLLAILFMIAAFGLFFITTFLGRVWCG HCCCCCCCCCEEEEEECCCCEEEEECEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLCPQTVWTFMYIWFEEKLEGAANKRRKQDSGKLTSNLILRKTIKHIAWWSIAIATGLTF HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VGYFIPIKELVVGFFTFNSTFWPVFWVLFFAGCTYANAGWMRSIVCLHMCPYARFQSAMF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHC DKDTFIVGYDTERGESRGPRSRKADPKELGLGDCIDCNLCVQVCPTGIDIRDGLQYECIN CCCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEC CGACIDACDNTMERMGYEKGLINYTTEHRLEGHSTKVMRPKLLGYGVILIVMLGLFFAQI CCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ASVDPAGLSVLRDRNQLFRINSQGLVENTYNLKVINKTQQEQEYKLDVSGLPDSIWYGKQ HCCCHHHHHHHHCCCCEEEECCCCCEECCEEEEEECCCCCCHHEEEECCCCCCCHHCCCE TITVDPGEVLNLPISLGVDPEKLSSPVSTIQFILSDNEEFTIKVESRFIKKL EEEECCCHHEECCEECCCCHHHHHCHHHHHHHHCCCCCEEEEEEHHHHHHCC >Mature Secondary Structure SQDKIDIKDVTPKTFNPKTHKGNGDRFNPSNRIYVRESKGKFQQLRRYGGWFLLLLFAL CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHH IPWIPFGERQAILLDIGSQQFNFFGTTLYPQDLTLLAILFMIAAFGLFFITTFLGRVWCG HCCCCCCCCCEEEEEECCCCEEEEECEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLCPQTVWTFMYIWFEEKLEGAANKRRKQDSGKLTSNLILRKTIKHIAWWSIAIATGLTF HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VGYFIPIKELVVGFFTFNSTFWPVFWVLFFAGCTYANAGWMRSIVCLHMCPYARFQSAMF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHC DKDTFIVGYDTERGESRGPRSRKADPKELGLGDCIDCNLCVQVCPTGIDIRDGLQYECIN CCCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEC CGACIDACDNTMERMGYEKGLINYTTEHRLEGHSTKVMRPKLLGYGVILIVMLGLFFAQI CCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ASVDPAGLSVLRDRNQLFRINSQGLVENTYNLKVINKTQQEQEYKLDVSGLPDSIWYGKQ HCCCHHHHHHHHCCCCEEEECCCCCEECCEEEEEECCCCCCHHEEEECCCCCCCHHCCCE TITVDPGEVLNLPISLGVDPEKLSSPVSTIQFILSDNEEFTIKVESRFIKKL EEEECCCHHEECCEECCCCHHHHHCHHHHHHHHCCCCCEEEEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]