| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is ptsG [H]
Identifier: 218710596
GI number: 218710596
Start: 2834835
End: 2836403
Strand: Reverse
Name: ptsG [H]
Synonym: VS_2649
Alternate gene names: 218710596
Gene position: 2836403-2834835 (Counterclockwise)
Preceding gene: 218710597
Following gene: 218710595
Centisome position: 85.97
GC content: 41.56
Gene sequence:
>1569_bases TTGATAAAGTTCGTTGGTATTCTAACGATATTAAAGGACTTTATTATGCTAGATAGTTTTAAAAGCGGCTTATCTAAGCT TTCCTTAATTGGTAAAGCATTGATGTTGCCCATATCTATATTACCCGCAGCGGGGTTATTACTTGCCTTCGGTGCTAAGC TCGACATTCCCCTAATGATGCGTGCTGGTGGCGTTATATTTGATAACTTAGCCTTACTGTTTGCGGTAGGAGCCGCGGTT GGTTTGACTAAGGAGTCAGGGATTGCCGCTTTAGCCGCGATTGTCGCCATGGTCGTGATGAATGCGACAATGGGGGTGGC GCTCGGCATTACACCTGAGATGGCGATGGGAGGTGGCCGTTATGCAATGGTGATGGGTATTCCTTCATTGCAAACAGGTG TATTTGGCGGACTCATTGCAGGTATCCTCGCAGCCGTTATGTATCAACGTTTCTATGATACTAAGCTGCCTGATTTCCTT GGTTTCTTTGCCGGTAAACGCTTTGTACCGATTGTGACTGCGTTTTCTGCATTCCTAATTGGTTTAGTTTTACCCCATAT TTGGTCATATATTCAATCAGGTATTGATGCGCTATCGCATATGGCGAATGGCGGAAACATGTACGTATCAACTTTCATCT ACGGATTTATGGAGCGCGCTTTAATTCCAGTTGGTCTCCATCATATTTTTTATAGCCCTTATTGGTTTTCTTTCGGTGAG TACACAACTGCCGCGGGTACCATTGTAAATGGCGATCATACCATTTGGTTTAAAATGCTTGAAGATGGAGTAAAAACGTT CTCAACCAGTGAATACCAAGAAGCAGGAAAATTCCTATCGGGTAATTTTGCTATCTACATGTTTGCTTTCCCTGCAGCAT GTTTAGCTATGTATCATGAAGCGAATGATAAAAATAAAAAAATTGCAGCAGGTATTTTAGGCTCTGCTGCTCTTACTTCT TTTGTTACAGGTATAACAGAACCCGTTGAATTTGCTTTTATCTTTGTCGCACCTTTACTTTATGTTTTTTCTGCAATCAT GGCAGGGGTGTCTTACGCGGTGACTTATGCGTTGGATGTTCATATTGGTAAAACCTTCTCAGCCGGCATTATTGATTTCG TGTCTTTTGGTGTTCTTCCCGCGATGGATGGGTTCAAAACTAACTGGATCAATGTGATTCTTTGGGGGCTAACCATGGCC GCTATTTATTACACGGTTTTCCGTTTTGCTATTCGAAAGTTCAATTTGAAAACAGTAGGACGTGAGGATACTCAAAGTAA GGCGATCACTTTGGACAATGAAGATTTAGCTAGTGAAATCACAATCTTGATTGGTGGTGCCGCTAACATTACTTCGATAG GAGCATGTATTACGAGATTGCGTTTACAGATTAAAGATCAGGCTCTTGTGAATGAACAAGGAATCAAAGACCTAGGTGCT ATGGGAGTTATAAAAGTAGGTTCAAATGGATTGCAAATTATTTTGGGCTCAAGAGCTCAATTTGTGGCTGATCTTATGAG TGAAAGAACTGGTGAGTCACCAAGTGCACTATCAACTAATCCAAGTTAA
Upstream 100 bases:
>100_bases CTAGAAATTACTATGTACCTTCGACATTTTCCAGCCTAGGTCTATTGTAAAAAACGAGTTACAAACTACTTGCTATTTGT AACCTTGAGATTCAATTAGC
Downstream 100 bases:
>100_bases AAGCACGGGCTACTTCCGATAAAGCTGGTGGCAACAAGCTTGTTGTCTCTGATACATAAATAATAACGCTATCAACGCTA TGGTTGGTGGCGTTTATTTG
Product: PTS system glucose-specific transporter subunit EIICBA
Products: NA
Alternate protein names: EIICBA-Glc; EII-Glc; Glucose permease IIC component; PTS system glucose-specific EIIC component; Glucose-specific phosphotransferase enzyme IIB component; PTS system glucose-specific EIIB component; Glucose-specific phosphotransferase enzyme IIA component; PTS system glucose-specific EIIA component [H]
Number of amino acids: Translated: 522; Mature: 522
Protein sequence:
>522_residues MIKFVGILTILKDFIMLDSFKSGLSKLSLIGKALMLPISILPAAGLLLAFGAKLDIPLMMRAGGVIFDNLALLFAVGAAV GLTKESGIAALAAIVAMVVMNATMGVALGITPEMAMGGGRYAMVMGIPSLQTGVFGGLIAGILAAVMYQRFYDTKLPDFL GFFAGKRFVPIVTAFSAFLIGLVLPHIWSYIQSGIDALSHMANGGNMYVSTFIYGFMERALIPVGLHHIFYSPYWFSFGE YTTAAGTIVNGDHTIWFKMLEDGVKTFSTSEYQEAGKFLSGNFAIYMFAFPAACLAMYHEANDKNKKIAAGILGSAALTS FVTGITEPVEFAFIFVAPLLYVFSAIMAGVSYAVTYALDVHIGKTFSAGIIDFVSFGVLPAMDGFKTNWINVILWGLTMA AIYYTVFRFAIRKFNLKTVGREDTQSKAITLDNEDLASEITILIGGAANITSIGACITRLRLQIKDQALVNEQGIKDLGA MGVIKVGSNGLQIILGSRAQFVADLMSERTGESPSALSTNPS
Sequences:
>Translated_522_residues MIKFVGILTILKDFIMLDSFKSGLSKLSLIGKALMLPISILPAAGLLLAFGAKLDIPLMMRAGGVIFDNLALLFAVGAAV GLTKESGIAALAAIVAMVVMNATMGVALGITPEMAMGGGRYAMVMGIPSLQTGVFGGLIAGILAAVMYQRFYDTKLPDFL GFFAGKRFVPIVTAFSAFLIGLVLPHIWSYIQSGIDALSHMANGGNMYVSTFIYGFMERALIPVGLHHIFYSPYWFSFGE YTTAAGTIVNGDHTIWFKMLEDGVKTFSTSEYQEAGKFLSGNFAIYMFAFPAACLAMYHEANDKNKKIAAGILGSAALTS FVTGITEPVEFAFIFVAPLLYVFSAIMAGVSYAVTYALDVHIGKTFSAGIIDFVSFGVLPAMDGFKTNWINVILWGLTMA AIYYTVFRFAIRKFNLKTVGREDTQSKAITLDNEDLASEITILIGGAANITSIGACITRLRLQIKDQALVNEQGIKDLGA MGVIKVGSNGLQIILGSRAQFVADLMSERTGESPSALSTNPS >Mature_522_residues MIKFVGILTILKDFIMLDSFKSGLSKLSLIGKALMLPISILPAAGLLLAFGAKLDIPLMMRAGGVIFDNLALLFAVGAAV GLTKESGIAALAAIVAMVVMNATMGVALGITPEMAMGGGRYAMVMGIPSLQTGVFGGLIAGILAAVMYQRFYDTKLPDFL GFFAGKRFVPIVTAFSAFLIGLVLPHIWSYIQSGIDALSHMANGGNMYVSTFIYGFMERALIPVGLHHIFYSPYWFSFGE YTTAAGTIVNGDHTIWFKMLEDGVKTFSTSEYQEAGKFLSGNFAIYMFAFPAACLAMYHEANDKNKKIAAGILGSAALTS FVTGITEPVEFAFIFVAPLLYVFSAIMAGVSYAVTYALDVHIGKTFSAGIIDFVSFGVLPAMDGFKTNWINVILWGLTMA AIYYTVFRFAIRKFNLKTVGREDTQSKAITLDNEDLASEITILIGGAANITSIGACITRLRLQIKDQALVNEQGIKDLGA MGVIKVGSNGLQIILGSRAQFVADLMSERTGESPSALSTNPS
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787343, Length=505, Percent_Identity=41.7821782178218, Blast_Score=360, Evalue=1e-100, Organism=Escherichia coli, GI1786894, Length=501, Percent_Identity=39.7205588822355, Blast_Score=309, Evalue=3e-85, Organism=Escherichia coli, GI1787908, Length=513, Percent_Identity=36.4522417153996, Blast_Score=288, Evalue=9e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR011299 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 55901; Mature: 55901
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKFVGILTILKDFIMLDSFKSGLSKLSLIGKALMLPISILPAAGLLLAFGAKLDIPLMM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH RAGGVIFDNLALLFAVGAAVGLTKESGIAALAAIVAMVVMNATMGVALGITPEMAMGGGR HCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCEEECCCHHHHCCCCC YAMVMGIPSLQTGVFGGLIAGILAAVMYQRFYDTKLPDFLGFFAGKRFVPIVTAFSAFLI EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHH GLVLPHIWSYIQSGIDALSHMANGGNMYVSTFIYGFMERALIPVGLHHIFYSPYWFSFGE HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCC YTTAAGTIVNGDHTIWFKMLEDGVKTFSTSEYQEAGKFLSGNFAIYMFAFPAACLAMYHE HHCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHH ANDKNKKIAAGILGSAALTSFVTGITEPVEFAFIFVAPLLYVFSAIMAGVSYAVTYALDV CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE HIGKTFSAGIIDFVSFGVLPAMDGFKTNWINVILWGLTMAAIYYTVFRFAIRKFNLKTVG EECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC REDTQSKAITLDNEDLASEITILIGGAANITSIGACITRLRLQIKDQALVNEQGIKDLGA CCCCCCCEEEECCHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC MGVIKVGSNGLQIILGSRAQFVADLMSERTGESPSALSTNPS CEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MIKFVGILTILKDFIMLDSFKSGLSKLSLIGKALMLPISILPAAGLLLAFGAKLDIPLMM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH RAGGVIFDNLALLFAVGAAVGLTKESGIAALAAIVAMVVMNATMGVALGITPEMAMGGGR HCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCEEECCCHHHHCCCCC YAMVMGIPSLQTGVFGGLIAGILAAVMYQRFYDTKLPDFLGFFAGKRFVPIVTAFSAFLI EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHH GLVLPHIWSYIQSGIDALSHMANGGNMYVSTFIYGFMERALIPVGLHHIFYSPYWFSFGE HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCC YTTAAGTIVNGDHTIWFKMLEDGVKTFSTSEYQEAGKFLSGNFAIYMFAFPAACLAMYHE HHCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHH ANDKNKKIAAGILGSAALTSFVTGITEPVEFAFIFVAPLLYVFSAIMAGVSYAVTYALDV CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE HIGKTFSAGIIDFVSFGVLPAMDGFKTNWINVILWGLTMAAIYYTVFRFAIRKFNLKTVG EECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC REDTQSKAITLDNEDLASEITILIGGAANITSIGACITRLRLQIKDQALVNEQGIKDLGA CCCCCCCEEEECCHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC MGVIKVGSNGLQIILGSRAQFVADLMSERTGESPSALSTNPS CEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA